Search of human proteins with 4505525

Search of human proteins with 4505525

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505525 origin recognition complex subunit 5 isoform 1 [Homo
sapiens]
         (435 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505525 origin recognition complex subunit 5 isoform 1 [Homo ...   883   0.0  
gi|32454754 origin recognition complex subunit 5 isoform 2 [Homo...   601   e-172
gi|223468602 t-complex 10-like 2 [Homo sapiens]                        34   0.30 
gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens]         33   0.51 
gi|82830424 gon-4-like isoform a [Homo sapiens]                        32   1.5  
gi|82830428 gon-4-like isoform b [Homo sapiens]                        32   1.5  
gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]           32   1.5  
gi|105553088 t-complex 10 [Homo sapiens]                               32   1.5  
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    29   7.3  

>gi|4505525 origin recognition complex subunit 5 isoform 1 [Homo
           sapiens]
          Length = 435

 Score =  883 bits (2282), Expect = 0.0
 Identities = 435/435 (100%), Positives = 435/435 (100%)

Query: 1   MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60
           MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF
Sbjct: 1   MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60

Query: 61  VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
           VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV
Sbjct: 61  VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120

Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180
           YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180

Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240
           DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV
Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240

Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300
           VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV
Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300

Query: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360
           ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD
Sbjct: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360

Query: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420
           RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA
Sbjct: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420

Query: 421 RTVNFDIIKYLYDFL 435
           RTVNFDIIKYLYDFL
Sbjct: 421 RTVNFDIIKYLYDFL 435


>gi|32454754 origin recognition complex subunit 5 isoform 2 [Homo
           sapiens]
          Length = 324

 Score =  601 bits (1550), Expect = e-172
 Identities = 293/294 (99%), Positives = 294/294 (100%)

Query: 1   MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60
           MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF
Sbjct: 1   MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60

Query: 61  VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
           VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV
Sbjct: 61  VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120

Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180
           YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180

Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240
           DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV
Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240

Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGL 294
           VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKG+
Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGI 294


>gi|223468602 t-complex 10-like 2 [Homo sapiens]
          Length = 353

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 21/118 (17%)

Query: 251 RKLWRNIEPHLKKAMQTVY---------LREISSSQWEKLQKDDTDPGQLKGLSAHTHVE 301
           + LW +I   L+  M  +          LR +   QWE  +K    P    G  +HT   
Sbjct: 65  QSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHA--GRESHTLAL 122

Query: 302 LPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPL 359
            P + K           +P   D+    K+ G+  ++  L     +SNHL  PKP  L
Sbjct: 123 EPAFGKI----------SPLSADEETTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSL 170


>gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens]
          Length = 633

 Score = 33.1 bits (74), Expect = 0.51
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 32  SIFIYGHTASGKTYVTQTLLKTLELPHVFVNC 63
           +I + G T SGKT + QTL K L++P    +C
Sbjct: 288 NILLLGPTGSGKTLLAQTLAKCLDVPFAICDC 319


>gi|82830424 gon-4-like isoform a [Homo sapiens]
          Length = 2240

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 21/98 (21%), Positives = 39/98 (39%)

Query: 248 RDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSK 307
           R  ++L+  ++     A Q   + ++     +  Q    DP Q K L       +   ++
Sbjct: 645 RTVKELFEQLKMKKSSAKQLQEVEKVKPQSEKVHQTLILDPAQRKRLQQQMQQHVQLLTQ 704

Query: 308 FILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHE 345
             L+A    + NP  T  R FLK  G   +++    H+
Sbjct: 705 IHLLATCNPNLNPEATTTRIFLKELGTFAQSSIALHHQ 742


>gi|82830428 gon-4-like isoform b [Homo sapiens]
          Length = 1529

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 21/98 (21%), Positives = 39/98 (39%)

Query: 248 RDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSK 307
           R  ++L+  ++     A Q   + ++     +  Q    DP Q K L       +   ++
Sbjct: 645 RTVKELFEQLKMKKSSAKQLQEVEKVKPQSEKVHQTLILDPAQRKRLQQQMQQHVQLLTQ 704

Query: 308 FILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHE 345
             L+A    + NP  T  R FLK  G   +++    H+
Sbjct: 705 IHLLATCNPNLNPEATTTRIFLKELGTFAQSSIALHHQ 742


>gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
          Length = 903

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 80  LNHLSSSEDGCSTEITCETFND------------------FVRLFKQVTTAENLKDQTVY 121
           + HL S+++  S  IT E  +D                  + RL + +   E  + Q V 
Sbjct: 463 IGHLPSAKESASQHITEEEDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQ 522

Query: 122 IVLDKAEYLRDMEANLLPGFLRLQELADRNVT----VLFLSEIVWEKFRPNTGCFE 173
            +     + R+   N +    +LQ+ AD  +     V+ L EIVW+++  + G FE
Sbjct: 523 DLESLGRHQREALKNPIGFVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFE 578


>gi|105553088 t-complex 10 [Homo sapiens]
          Length = 326

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 21/118 (17%)

Query: 251 RKLWRNIEPHLKKAMQTVY---------LREISSSQWEKLQKDDTDPGQLKGLSAHTHVE 301
           + LW +I   L+  M  +          LR +   QWE  +K    P    G  +HT   
Sbjct: 38  QSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHA--GRESHTLAL 95

Query: 302 LPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPL 359
            P + K   ++A          D+    K+ G+  ++  L     +SNHL  PKP  L
Sbjct: 96  EPAFGKISHLSA----------DEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSL 143


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 33  IFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKLN---HLSSSEDG 89
           IF YG T SGKTY  Q   + + +    +N +       L E++  K+N   H S     
Sbjct: 148 IFTYGLTNSGKTYTFQGTEENIGILPRTLNVL----FDSLQERLYTKMNLKPHRSREYLR 203

Query: 90  CSTEITCETFNDFVRLFKQV--TTAENLKDQTVYIVLDKAEYLRDMEANL 137
            S+E   E       L +Q+   T  N  D T+Y  L  +  + + E ++
Sbjct: 204 LSSEQEKEEIASKSALLRQIKEVTVHNDSDDTLYGSLTNSLNISEFEESI 253


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,344,656
Number of Sequences: 37866
Number of extensions: 691015
Number of successful extensions: 1725
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1719
Number of HSP's gapped (non-prelim): 10
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.