Guide to the Human Genome
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Name: NQO1 Sequence: fasta or formatted (274aa) NCBI GI: 4505415
Description:

NAD(P)H menadione oxidoreductase 1, dioxin-inducible isoform a

Referenced in:

Xenobiotic Pathways

Other entries for this name:
alt prot [240aa] NAD(P)H menadione oxidoreductase 1, dioxin-inducible isoform b
alt prot [236aa] NAD(P)H menadione oxidoreductase 1, dioxin-inducible isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         25           5
 C cysteine            0.4          1           1
 D aspartate           4.4         12           1
 E glutamate           6.2         17           2
 F phenylalanine       6.2         17           1
 G glycine             7.7         21           2
 H histidine           2.6          7           2
 I isoleucine          6.9         19           2
 K lysine              8.8         24           3
 L leucine             9.1         25           1
 M methionine          2.6          7           1
 N asparagine          3.3          9           1
 P proline             4.7         13           1
 Q glutamine           4.4         12           1
 R arginine            3.3          9           2
 S serine              6.2         17           2
 T threonine           3.3          9           2
 V valine              5.1         14           2
 W tryptophan          2.2          6           1
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NAD(P)H menadione oxidoreductase 1, dioxin-inducible ... 
NQO1                  0.842   NAD(P)H menadione oxidoreductase 1, dioxin-inducible...
NQO1                  0.810   NAD(P)H menadione oxidoreductase 1, dioxin-inducible...
NQO2                  0.367   NAD(P)H dehydrogenase, quinone 2 
SLC39A1               0.009   solute carrier family 39 (zinc transporter), member ...
TMPRSS13              0.009   transmembrane protease, serine 13 
CASC5                 0.008   cancer susceptibility candidate 5 isoform 2 
CASC5                 0.008   cancer susceptibility candidate 5 isoform 1 
ALDH3A2               0.006   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.006   aldehyde dehydrogenase 3A2 isoform 1 
SIPA1L1               0.006   signal-induced proliferation-associated 1 like 1 [Hom...
TMPRSS5               0.006   transmembrane protease, serine 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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