Guide to the Human Genome
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Name: NDUFA4 Sequence: fasta or formatted (81aa) NCBI GI: 4505357
Description:

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          4           1
 C cysteine            1.2          1           1
 D aspartate           6.2          5           1
 E glutamate           2.5          2           1
 F phenylalanine       6.2          5           1
 G glycine             6.2          5           1
 H histidine           1.2          1           1
 I isoleucine          4.9          4           2
 K lysine              8.6          7           2
 L leucine            12.3         10           2
 M methionine          1.2          1           1
 N asparagine          7.4          6           2
 P proline             8.6          7           1
 Q glutamine           3.7          3           1
 R arginine            4.9          4           1
 S serine              3.7          3           1
 T threonine           3.7          3           1
 V valine              4.9          4           1
 W tryptophan          2.5          2           1
 Y tyrosine            4.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4... 
LOC100292787          0.758   PREDICTED: similar to hCG2040339 
LOC100287880          0.758   PREDICTED: similar to hCG2040339 
LOC100287880          0.758   PREDICTED: hypothetical protein XP_002342432 
LOC100291584          0.638   PREDICTED: similar to NADH dehydrogenase (ubiquinon...
LOC100289778          0.638   PREDICTED: hypothetical protein XP_002347281 
LOC100287801          0.638   PREDICTED: hypothetical protein XP_002343134 
NDUFA4L2              0.570   NADH:ubiquinone oxidoreductase MLRQ subunit homolog ...
C15orf48              0.114   normal mucosa of esophagus specific 1 
C15orf48              0.114   normal mucosa of esophagus specific 1 
ANO8                  0.013   anoctamin 8 
SLC28A1               0.013   solute carrier family 28, member 1 isoform 2 
SMAD6                 0.007   SMAD family member 6 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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