Guide to the Human Genome
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Name: NEU3 Sequence: fasta or formatted (461aa) NCBI GI: 117190519
Description:

sialidase 3

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         28           2
 C cysteine            4.6         21           1
 D aspartate           3.3         15           2
 E glutamate           8.0         37           3
 F phenylalanine       4.1         19           2
 G glycine             7.2         33           1
 H histidine           3.7         17           2
 I isoleucine          4.1         19           1
 K lysine              2.0          9           1
 L leucine             9.5         44           2
 M methionine          1.5          7           1
 N asparagine          1.5          7           1
 P proline             8.0         37           2
 Q glutamine           4.8         22           2
 R arginine            7.8         36           2
 S serine              8.9         41           3
 T threonine           5.9         27           2
 V valine              4.8         22           2
 W tryptophan          2.0          9           1
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialidase 3 
NEU4                  0.330   sialidase 4 
NEU2                  0.247   neuraminidase 2 
NEU1                  0.044   neuraminidase precursor 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 1 
MCTP1                 0.007   multiple C2 domains, transmembrane 1 isoform L [Hom...
B4GALT2               0.006   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.006   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
DIO3                  0.005   deiodinase, iodothyronine, type III 
NFATC4                0.005   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.005   nuclear factor of activated T-cells, cytoplasmic, ca...
LOC100288232          0.005   PREDICTED: hypothetical protein XP_002343793 
B4GALT1               0.005   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
PPP1R3G               0.004   protein phosphatase 1, regulatory (inhibitor) subun...
LOC100291914          0.004   PREDICTED: hypothetical protein XP_002345991 
LOC100290611          0.004   PREDICTED: hypothetical protein XP_002346841 
LOC100287467          0.004   PREDICTED: hypothetical protein XP_002342727 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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