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Search of human proteins with 4503805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503805 fucosyltransferase 1 [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503805 fucosyltransferase 1 [Homo sapiens] 768 0.0
gi|148224427 fucosyltransferase 2 [Homo sapiens] 422 e-118
gi|148237372 fucosyltransferase 2 [Homo sapiens] 422 e-118
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 33 0.31
gi|51873067 quiescin Q6 sulfhydryl oxidase 1 isoform b [Homo sap... 31 1.5
gi|13325075 quiescin Q6 sulfhydryl oxidase 1 isoform a [Homo sap... 31 1.5
gi|62198237 DNA-directed DNA polymerase epsilon [Homo sapiens] 30 3.4
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens] 30 4.4
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens] 30 4.4
gi|169162264 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 5.8
gi|239747467 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 5.8
gi|239741341 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 5.8
gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens] 29 7.6
gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens] 29 7.6
gi|4503743 flightless I homolog [Homo sapiens] 28 9.9
>gi|4503805 fucosyltransferase 1 [Homo sapiens]
Length = 365
Score = 768 bits (1984), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT 60
MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT
Sbjct: 1 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT 60
Query: 61 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL 120
AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL
Sbjct: 61 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL 120
Query: 121 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ 180
APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ
Sbjct: 121 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ 180
Query: 181 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA 240
IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA
Sbjct: 181 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA 240
Query: 241 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC 300
YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC
Sbjct: 241 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC 300
Query: 301 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW 360
NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW
Sbjct: 301 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW 360
Query: 361 TLAKP 365
TLAKP
Sbjct: 361 TLAKP 365
>gi|148224427 fucosyltransferase 2 [Homo sapiens]
Length = 343
Score = 422 bits (1085), Expect = e-118
Identities = 199/294 (67%), Positives = 233/294 (79%), Gaps = 2/294 (0%)
Query: 66 ASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAALAPVFR 125
AS+S P+ L G WT+ GR GNQMG+YATL ALA++NGR AFI MH+ LAP+FR
Sbjct: 49 ASTSKALGPSQLRGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFR 108
Query: 126 ITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREF 185
ITLPVL SR PW+ L+DWM EEY + +++ +G+PCSWTF+HHLR++I +EF
Sbjct: 109 ITLPVLHSATASRIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEF 168
Query: 186 TLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQA 245
TLHDH+REEAQ L L++ G RP TFVGVHVRRGDY+ VMP+ WKGVV D YL+QA
Sbjct: 169 TLHDHVREEAQKFLRGLQVN--GSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQA 226
Query: 246 MDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIM 305
+DWFRAR+ + +FVVTSNGM WC+ENIDTS GDV FAGDG E +P KDFALLTQCNHTIM
Sbjct: 227 LDWFRARYSSLIFVVTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIM 286
Query: 306 TIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPL 359
TIGTFG WAAYL GGDT+YLAN+TLPDS FLKIFKPEAAFLPEW GI ADLSPL
Sbjct: 287 TIGTFGIWAAYLTGGDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPL 340
>gi|148237372 fucosyltransferase 2 [Homo sapiens]
Length = 343
Score = 422 bits (1085), Expect = e-118
Identities = 199/294 (67%), Positives = 233/294 (79%), Gaps = 2/294 (0%)
Query: 66 ASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAALAPVFR 125
AS+S P+ L G WT+ GR GNQMG+YATL ALA++NGR AFI MH+ LAP+FR
Sbjct: 49 ASTSKALGPSQLRGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFR 108
Query: 126 ITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREF 185
ITLPVL SR PW+ L+DWM EEY + +++ +G+PCSWTF+HHLR++I +EF
Sbjct: 109 ITLPVLHSATASRIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEF 168
Query: 186 TLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQA 245
TLHDH+REEAQ L L++ G RP TFVGVHVRRGDY+ VMP+ WKGVV D YL+QA
Sbjct: 169 TLHDHVREEAQKFLRGLQVN--GSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQA 226
Query: 246 MDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIM 305
+DWFRAR+ + +FVVTSNGM WC+ENIDTS GDV FAGDG E +P KDFALLTQCNHTIM
Sbjct: 227 LDWFRARYSSLIFVVTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIM 286
Query: 306 TIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPL 359
TIGTFG WAAYL GGDT+YLAN+TLPDS FLKIFKPEAAFLPEW GI ADLSPL
Sbjct: 287 TIGTFGIWAAYLTGGDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPL 340
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 33.5 bits (75), Expect = 0.31
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 220 RRGDYLQVMPQRWKGVVGDSA-YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGD 278
RR D LQ M +WKG D Y R A+D + P+ ++GM+ C E + GD
Sbjct: 112 RRADCLQ-MILKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGD 170
Query: 279 VTFAGDGQEATP 290
+ FA + + TP
Sbjct: 171 L-FAENENKDTP 181
>gi|51873067 quiescin Q6 sulfhydryl oxidase 1 isoform b [Homo
sapiens]
Length = 604
Score = 31.2 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 166 GFPCS-WTFFHHLREQIRREFTLHDHLREEAQSVLGQLR 203
GFPCS W FH L Q R+ H +A+ VL +R
Sbjct: 402 GFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIR 440
>gi|13325075 quiescin Q6 sulfhydryl oxidase 1 isoform a [Homo
sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 166 GFPCS-WTFFHHLREQIRREFTLHDHLREEAQSVLGQLR 203
GFPCS W FH L Q R+ H +A+ VL +R
Sbjct: 402 GFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIR 440
>gi|62198237 DNA-directed DNA polymerase epsilon [Homo sapiens]
Length = 2286
Score = 30.0 bits (66), Expect = 3.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 171 WTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRR 221
W FH + Q++ L R+ +S G LR G D P T +G +RR
Sbjct: 1271 WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPATGLGSFLRR 1321
>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
Length = 1523
Score = 29.6 bits (65), Expect = 4.4
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 39 SILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYAT 98
S+L DR L TP A PG A G +A S+C A+ S + + G+ G
Sbjct: 1186 SVLPTDRNLPTPTSAP--TPGLAQGVHAPSTCSYMEATASSRARISRSISLGDSEGPIVA 1243
Query: 99 LLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWMSEE 153
LA L ++ L + T P L E +E L W + E
Sbjct: 1244 TLAQPLRRPSSVGELASLGQELQAITTATTPSLDSE------GQEPALRSWGNHE 1292
>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
Length = 1518
Score = 29.6 bits (65), Expect = 4.4
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 39 SILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYAT 98
S+L DR L TP A PG A G +A S+C A+ S + + G+ G
Sbjct: 1181 SVLPTDRNLPTPTSAP--TPGLAQGVHAPSTCSYMEATASSRARISRSISLGDSEGPIVA 1238
Query: 99 LLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWMSEE 153
LA L ++ L + T P L E +E L W + E
Sbjct: 1239 TLAQPLRRPSSVGELASLGQELQAITTATTPSLDSE------GQEPALRSWGNHE 1287
>gi|169162264 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 29.3 bits (64), Expect = 5.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 54 IFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYA--TLLALAQL 105
+ + G GPN +HP+SL+G W + G ++G A ++L AQL
Sbjct: 302 VLLVQGEPQGPNWVGRVLEHPSSLTGAWIWRGSRAGGKRLGLTAPSSMLLPAQL 355
>gi|239747467 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 29.3 bits (64), Expect = 5.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 54 IFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYA--TLLALAQL 105
+ + G GPN +HP+SL+G W + G ++G A ++L AQL
Sbjct: 302 VLLVQGEPQGPNWVGRVLEHPSSLTGAWIWRGSRAGGKRLGLTAPSSMLLPAQL 355
>gi|239741341 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 29.3 bits (64), Expect = 5.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 54 IFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYA--TLLALAQL 105
+ + G GPN +HP+SL+G W + G ++G A ++L AQL
Sbjct: 302 VLLVQGEPQGPNWVGRVLEHPSSLTGAWIWRGSRAGGKRLGLTAPSSMLLPAQL 355
>gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens]
Length = 189
Score = 28.9 bits (63), Expect = 7.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 9/41 (21%)
Query: 152 EEYADLRDPFLKLS-GFPC--------SWTFFHHLREQIRR 183
EEY+ +RD +++ GF C S+ HH REQI+R
Sbjct: 62 EEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKR 102
>gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens]
Length = 188
Score = 28.9 bits (63), Expect = 7.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 9/41 (21%)
Query: 152 EEYADLRDPFLKLS-GFPC--------SWTFFHHLREQIRR 183
EEY+ +RD +++ GF C S+ HH REQI+R
Sbjct: 62 EEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKR 102
>gi|4503743 flightless I homolog [Homo sapiens]
Length = 1269
Score = 28.5 bits (62), Expect = 9.9
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 238 DSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPW 291
D+ Y++ FR +E F VT ++C++ D + D+ +GQE W
Sbjct: 1157 DAEYMKHTR-LFRCSNEKGYFAVTEKCSDFCQD--DLADDDIMLLDNGQEVYMW 1207
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,221,304
Number of Sequences: 37866
Number of extensions: 719151
Number of successful extensions: 1924
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1918
Number of HSP's gapped (non-prelim): 15
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.