Guide to the Human Genome
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Name: FUT1 Sequence: fasta or formatted (365aa) NCBI GI: 4503805
Description:

fucosyltransferase 1

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         31           2
 C cysteine            2.2          8           1
 D aspartate           4.9         18           1
 E glutamate           4.1         15           2
 F phenylalanine       6.6         24           2
 G glycine             7.1         26           2
 H histidine           3.8         14           2
 I isoleucine          3.3         12           1
 K lysine              1.9          7           1
 L leucine            12.1         44           2
 M methionine          2.5          9           1
 N asparagine          2.5          9           1
 P proline             6.8         25           2
 Q glutamine           4.4         16           1
 R arginine            6.8         25           2
 S serine              5.2         19           3
 T threonine           6.0         22           1
 V valine              6.0         22           2
 W tryptophan          3.3         12           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fucosyltransferase 1 
FUT2                  0.534   fucosyltransferase 2 
FUT2                  0.534   fucosyltransferase 2 
ANKIB1                0.011   ankyrin repeat and IBR domain containing 1 
QSOX1                 0.008   quiescin Q6 sulfhydryl oxidase 1 isoform b 
QSOX1                 0.008   quiescin Q6 sulfhydryl oxidase 1 isoform a 
POLE                  0.007   DNA-directed DNA polymerase epsilon 
WDR62                 0.007   WD repeat domain 62 isoform 1 
WDR62                 0.007   WD repeat domain 62 isoform 2 
LOC343052             0.005   PREDICTED: similar to hCG1996527 
LOC343052             0.005   PREDICTED: similar to hCG1996527 
LOC343052             0.005   PREDICTED: similar to hCG1996527 
KRAS                  0.005   c-K-ras2 protein isoform a precursor 
KRAS                  0.005   c-K-ras2 protein isoform b precursor 
FLII                  0.004   flightless I homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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