Search of human proteins with 4503051

Search of human proteins with 4503051

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503051 collapsin response mediator protein 1 isoform 2
[Homo sapiens]
         (572 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo...  1155   0.0  
gi|62422571 collapsin response mediator protein 1 isoform 1 [Hom...  1129   0.0  
gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]                  920   0.0  
gi|4503379 dihydropyrimidinase-like 3 [Homo sapiens]                  881   0.0  
gi|190194363 dihydropyrimidinase-like 4 [Homo sapiens]                835   0.0  
gi|4503375 dihydropyrimidinase [Homo sapiens]                         625   e-179
gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]                 586   e-167
gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba...    42   0.001
gi|209447096 transmembrane protein 2 isoform b [Homo sapiens]          31   2.7  
gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]            31   2.7  
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s...    30   6.0  
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa...    30   6.0  
gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens]       30   6.0  
gi|154689780 son of sevenless homolog 2 [Homo sapiens]                 30   7.8  
gi|18959210 WIRE protein [Homo sapiens]                                30   7.8  

>gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo
           sapiens]
          Length = 572

 Score = 1155 bits (2988), Expect = 0.0
 Identities = 572/572 (100%), Positives = 572/572 (100%)

Query: 1   MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA 60
           MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA
Sbjct: 1   MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA 60

Query: 61  NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF 120
           NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF
Sbjct: 61  NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF 120

Query: 121 EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ 180
           EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ
Sbjct: 121 EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ 180

Query: 181 LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI 240
           LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI
Sbjct: 181 LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI 240

Query: 241 TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA 300
           TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA
Sbjct: 241 TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA 300

Query: 301 FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE 360
           FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE
Sbjct: 301 FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE 360

Query: 361 RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI 420
           RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI
Sbjct: 361 RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI 420

Query: 421 TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ 480
           TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ
Sbjct: 421 TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ 480

Query: 481 RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS 540
           RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS
Sbjct: 481 RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS 540

Query: 541 LSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG 572
           LSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG
Sbjct: 541 LSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG 572


>gi|62422571 collapsin response mediator protein 1 isoform 1 [Homo
           sapiens]
          Length = 686

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 559/559 (100%), Positives = 559/559 (100%)

Query: 14  SDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVN 73
           SDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVN
Sbjct: 128 SDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVN 187

Query: 74  TYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC 133
           TYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC
Sbjct: 188 TYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC 247

Query: 134 DYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGA 193
           DYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGA
Sbjct: 248 DYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGA 307

Query: 194 VILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYIT 253
           VILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYIT
Sbjct: 308 VILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYIT 367

Query: 254 KVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTT 313
           KVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTT
Sbjct: 368 KVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTT 427

Query: 314 PDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATG 373
           PDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATG
Sbjct: 428 PDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATG 487

Query: 374 KMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNI 433
           KMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNI
Sbjct: 488 KMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNI 547

Query: 434 FEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQG 493
           FEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQG
Sbjct: 548 FEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQG 607

Query: 494 VSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRR 553
           VSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRR
Sbjct: 608 VSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRR 667

Query: 554 TGHRIVAPPGGRSNITSLG 572
           TGHRIVAPPGGRSNITSLG
Sbjct: 668 TGHRIVAPPGGRSNITSLG 686


>gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]
          Length = 572

 Score =  920 bits (2377), Expect = 0.0
 Identities = 436/572 (76%), Positives = 510/572 (89%)

Query: 1   MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA 60
           MSYQGKK+IP ITSDRLLIKGG+I+NDDQS YAD+Y+EDGLIKQIGENLIVPGGVKTIEA
Sbjct: 1   MSYQGKKNIPRITSDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEA 60

Query: 61  NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF 120
           + RMVIPGGIDV+T  Q P QGMT+ADDFFQGT+AAL GGTTMIIDHVVPEPG+SLL +F
Sbjct: 61  HSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAF 120

Query: 121 EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ 180
           ++W E AD+KSCCDYSLHVDI+ W+ G++EE+E LV+D GVNSF VYMA+KD +Q++D Q
Sbjct: 121 DQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDRFQLTDCQ 180

Query: 181 LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI 240
           +YE  + ++ +GA+  VHAENGD+IA+EQ+RIL++GITGPEGH LSRPEE+EAEAV RAI
Sbjct: 181 IYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAI 240

Query: 241 TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA 300
           TIA + NCP+YITKVMSKS+A++IA ARKKG +V+GEPI ASLGTDG+HYWSKNWAKAAA
Sbjct: 241 TIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAA 300

Query: 301 FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE 360
           FVTSPPLSPDPTTPD+L SLL+CGDLQVTGS HC ++TAQKAVGKDNFTLIPEG NG EE
Sbjct: 301 FVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEE 360

Query: 361 RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI 420
           RM+V+WDKAV TGKMDENQFVAVTSTNAAK+FNLYPRKGRIAVGSDAD+VIWDPD +KTI
Sbjct: 361 RMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTI 420

Query: 421 TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ 480
           +AK+H S++EYNIFEGMEC GSPLVVISQGKIV EDG ++V +G GR+IPRK FP+ +Y+
Sbjct: 421 SAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYK 480

Query: 481 RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS 540
           R+K R+++  L+GV RG+YDGPV EV  TPK  TPA SAK+SP+K Q PP+RNLHQS FS
Sbjct: 481 RIKARSRLAELRGVPRGLYDGPVCEVSVTPKTVTPASSAKTSPAKQQAPPVRNLHQSGFS 540

Query: 541 LSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG 572
           LSGAQIDDN PRRT  RIVAPPGGR+NITSLG
Sbjct: 541 LSGAQIDDNIPRRTTQRIVAPPGGRANITSLG 572


>gi|4503379 dihydropyrimidinase-like 3 [Homo sapiens]
          Length = 570

 Score =  881 bits (2277), Expect = 0.0
 Identities = 425/571 (74%), Positives = 494/571 (86%), Gaps = 2/571 (0%)

Query: 1   MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA 60
           MSYQGKK+IP ITSDRLLIKGGRI+NDDQS YAD+Y+EDGLIKQIG+NLIVPGGVKTIEA
Sbjct: 1   MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEA 60

Query: 61  NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF 120
           NG+MVIPGGIDV+T+ Q P +GMT  DDFFQGT+AAL GGTTMIIDHVVPEP SSL  ++
Sbjct: 61  NGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLTEAY 120

Query: 121 EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ 180
           EKW E AD KSCCDY+LHVDIT W D V++E++ L++DKGVNSF VYMAYKD+YQ+S+++
Sbjct: 121 EKWREWADGKSCCDYALHVDITHWNDSVKQEVQNLIKDKGVNSFMVYMAYKDLYQVSNTE 180

Query: 181 LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI 240
           LYE FT L  LGA+  VHAENGD+IAQEQ R+LEMGITGPEGH LSRPEELEAEAVFRAI
Sbjct: 181 LYEIFTCLGELGAIAQVHAENGDIIAQEQTRMLEMGITGPEGHVLSRPEELEAEAVFRAI 240

Query: 241 TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA 300
           TIA + NCP+Y+TKVMSKSAAD+I+ ARKKG +VFGEPI ASLG DGTHYWSKNWAKAAA
Sbjct: 241 TIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAA 300

Query: 301 FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE 360
           FVTSPPLSPDPTTPDY+ SLLA GDLQ++GS HC +STAQKA+GKDNFT IPEG NG+EE
Sbjct: 301 FVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEE 360

Query: 361 RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI 420
           RM+V+WDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRI+VGSD+D+VIWDPD +K +
Sbjct: 361 RMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRISVGSDSDLVIWDPDAVKIV 420

Query: 421 TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ 480
           +AK+H+SA EYNIFEGME  G+PLVVI QGKI+ EDGN++V +G GRFIP   F +++Y+
Sbjct: 421 SAKNHQSAAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGAGRFIPCSPFSDYVYK 480

Query: 481 RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS 540
           R+K R K+  L  V RGMYDGPV+++  TPK  TPA SA+ SP++   PP+RNLHQS FS
Sbjct: 481 RIKARRKMADLHAVPRGMYDGPVFDLTTTPKGGTPAGSARGSPTRPN-PPVRNLHQSGFS 539

Query: 541 LSGAQIDDNNPRRTGHRIVAPPGGRSNITSL 571
           LSG Q+D+   R    RIVAPPGGRSNITSL
Sbjct: 540 LSGTQVDE-GVRSASKRIVAPPGGRSNITSL 569


>gi|190194363 dihydropyrimidinase-like 4 [Homo sapiens]
          Length = 572

 Score =  835 bits (2157), Expect = 0.0
 Identities = 395/571 (69%), Positives = 480/571 (84%)

Query: 1   MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEA 60
           MS+QGKKSIP ITSDRLLI+GGRI+NDDQS YADV++EDGLIKQIGENLIVPGG+KTI+A
Sbjct: 1   MSFQGKKSIPRITSDRLLIRGGRIVNDDQSFYADVHVEDGLIKQIGENLIVPGGIKTIDA 60

Query: 61  NGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSF 120
           +G MV+PGG+DV+T LQ P  GMT ADDF QGT+AAL GGTTMI+DHV P+ G SLL ++
Sbjct: 61  HGLMVLPGGVDVHTRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDTGVSLLAAY 120

Query: 121 EKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQ 180
           E+W E AD+ +CCDYSLHVDIT W++ ++EELE LV++KGVNSF V+MAYKD  Q SDSQ
Sbjct: 121 EQWRERADSAACCDYSLHVDITRWHESIKEELEALVKEKGVNSFLVFMAYKDRCQCSDSQ 180

Query: 181 LYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAI 240
           +YE F+ ++ LGA+  VHAENGD++ +EQKR+LE+GITGPEGH LS PEE+EAEAV+RA+
Sbjct: 181 MYEIFSIIRDLGALAQVHAENGDIVEEEQKRLLELGITGPEGHVLSHPEEVEAEAVYRAV 240

Query: 241 TIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAA 300
           TIA + NCP+Y+TKVMSK AAD IA A+++G +VFGEPI ASLGTDG+HYWSKNWAKAAA
Sbjct: 241 TIAKQANCPLYVTKVMSKGAADAIAQAKRRGVVVFGEPITASLGTDGSHYWSKNWAKAAA 300

Query: 301 FVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEE 360
           FVTSPP++PDPTT D+LT LL+ GDLQVTGS HC ++TAQKAVGKDNF LIPEG NGIEE
Sbjct: 301 FVTSPPVNPDPTTADHLTCLLSSGDLQVTGSAHCTFTTAQKAVGKDNFALIPEGTNGIEE 360

Query: 361 RMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTI 420
           RM++VW+K VA+GKMDEN+FVAVTSTNAAKIFN YPRKGR+AVGSDAD+VIW+P   K I
Sbjct: 361 RMSMVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPKATKII 420

Query: 421 TAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQ 480
           +AK+H   VEYNIFEG+EC G+P VVISQG++  EDG + V  G GRF+PRK FP+ +Y+
Sbjct: 421 SAKTHNLNVEYNIFEGVECRGAPAVVISQGRVALEDGKMFVTPGAGRFVPRKTFPDFVYK 480

Query: 481 RVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFS 540
           R+K RN++  + GV RG+YDGPV+EV    K  + AP+  S P K   PP+RNLHQS FS
Sbjct: 481 RIKARNRLAEIHGVPRGLYDGPVHEVMVPAKPGSGAPARASCPGKISVPPVRNLHQSGFS 540

Query: 541 LSGAQIDDNNPRRTGHRIVAPPGGRSNITSL 571
           LSG+Q DD+  RRT  +I+APPGGRSNITSL
Sbjct: 541 LSGSQADDHIARRTAQKIMAPPGGRSNITSL 571


>gi|4503375 dihydropyrimidinase [Homo sapiens]
          Length = 519

 Score =  625 bits (1611), Expect = e-179
 Identities = 304/518 (58%), Positives = 390/518 (75%), Gaps = 8/518 (1%)

Query: 16  RLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGG----VKTIEANGRMVIPGGID 71
           RLLI+GGR++NDD S  ADV +EDG+++ +G +L+ PGG    ++ ++A G++V+PGGID
Sbjct: 6   RLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGID 65

Query: 72  VNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKS 131
            +T++Q P  G  + DDF QGT+AAL GGTTMIID  +P+ G SL+ +FE W   AD K 
Sbjct: 66  THTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKV 125

Query: 132 CCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGL 191
           CCDYSLHV +T W D V+EE+++LVQDKGVNSF+++MAYKD+Y ++D +LYEAF+  K +
Sbjct: 126 CCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEI 185

Query: 192 GAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVY 251
           GA+  VHAENGDLIA+  K++L +GITGPEGH L RPE +EAEA  RAITIA  +NCP+Y
Sbjct: 186 GAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLY 245

Query: 252 ITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDP 311
           I  VMSKSAA +IA AR+ G +V+GEPIAASLGTDGTHYW+K W  AA  V  PPL PDP
Sbjct: 246 IVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDP 305

Query: 312 TTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVA 371
           +TPD+L +LLA  DL  TG+ +C ++T QKA+GKD+FT IP GVNG+E+RM+V+W+K V 
Sbjct: 306 STPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVH 365

Query: 372 TGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEY 431
           +GKMDEN+FVAVTSTNAAKIFNLYPRKGRIAVGSDAD+VIWDP   +TI+AK+H  AV +
Sbjct: 366 SGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNF 425

Query: 432 NIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGL 491
           NIFEGM CHG PLV IS+GK+V+E G  +V  G G+FIPRK F E++Y+R+K R++    
Sbjct: 426 NIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRDRTCTP 485

Query: 492 QGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPP 529
             V R  Y G V    AT K       A +   K   P
Sbjct: 486 TPVERAPYKGEV----ATLKSRVTKEDATAGTRKQAHP 519


>gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]
          Length = 564

 Score =  586 bits (1510), Expect = e-167
 Identities = 284/557 (50%), Positives = 396/557 (71%), Gaps = 5/557 (0%)

Query: 14  SDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVN 73
           S R+LIKGG+++NDD +  ADVY+E+G+I+Q+G  L++PGG K I+A G++VIPGGID +
Sbjct: 7   SVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTS 66

Query: 74  TYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC 133
           T+  +     T  DDF+ GT+AALVGGTTMII HV+P+  +SL+ ++EK    AD K CC
Sbjct: 67  THFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCC 126

Query: 134 DYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGA 193
           DY+LHV IT W   V+ E+E LV++KGVNSFQ++M YKD+Y + DS+LY+     K +GA
Sbjct: 127 DYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGA 186

Query: 194 VILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYIT 253
           +  VHAENG+L+A+  K  L++GITGPEG  +SRPEELEAEA  R ITIA R +CP+Y+ 
Sbjct: 187 IARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLV 246

Query: 254 KVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTT 313
            V S SA D+IA A+ +G +V  E   A     G HY+ ++W+ AAA+VT PPL  D  T
Sbjct: 247 NVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNT 306

Query: 314 PDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATG 373
             YL SLLA   L +  S H P++T QKA+GK++FT IP GV+G+++RM+V+W++ V  G
Sbjct: 307 STYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGG 366

Query: 374 KMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNI 433
           KMDEN+FVAVTS+NAAK+ NLYPRKGRI  G+DADVV+WDP+  KTI+A +     ++N+
Sbjct: 367 KMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNL 426

Query: 434 FEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQG 493
           +E M CHG PLV IS+G++V+E+G     +G G+F P ++FP+ +Y+++  R K   ++G
Sbjct: 427 YENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRG 486

Query: 494 VSRGMYDGPVYEV--PATPKYATPAPSAKSSP-SKHQPPPIRNLHQSNFSLSGAQIDDNN 550
           V R  Y G V  V  P   +  TP     + P ++H    +R+LH+S+FSLSG+QIDD+ 
Sbjct: 487 VDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRH--GGMRDLHESSFSLSGSQIDDHV 544

Query: 551 PRRTGHRIVAPPGGRSN 567
           P+R   RI+APPGGRS+
Sbjct: 545 PKRASARILAPPGGRSS 561


>gi|18105007 carbamoylphosphate synthetase 2/aspartate
            transcarbamylase/dihydroorotase [Homo sapiens]
          Length = 2225

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 66   IPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHE 125
            +PG IDV+ +L++P  G T  +DF  GT AAL GG TM+       P      +     +
Sbjct: 1464 LPGLIDVHVHLREP--GGTHKEDFASGTAAALAGGITMVCAMPNTRPPIIDAPALALAQK 1521

Query: 126  AADTKSCCDYSLHVDITS 143
             A+  + CD++L +  +S
Sbjct: 1522 LAEAGARCDFALFLGASS 1539



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 17/149 (11%)

Query: 331  SGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAK 390
            S H P++  +K   +      P G  G+E  + ++   AV+ G++  +  +     N  +
Sbjct: 1685 SDHAPHTLEEKCGSRP-----PPGFPGLETMLPLLLT-AVSEGRLSLDDLLQRLHHNPRR 1738

Query: 391  IFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQG 450
            IF+L P++       D  V + D +   TI +    S   +  FEG +  G+   V+ +G
Sbjct: 1739 IFHLPPQE-------DTYVEV-DLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRG 1790

Query: 451  KIVFEDGNINVNKGMGRFI---PRKAFPE 476
            ++ + DG + V  G G+ +   P+ A P+
Sbjct: 1791 EVAYIDGQVLVPPGYGQDVRKWPQGAVPQ 1819


>gi|209447096 transmembrane protein 2 isoform b [Homo sapiens]
          Length = 1320

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 447 ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEV 506
           +S+   V E  N     G  +++      +    R   RN+ F ++G    +YDGP++  
Sbjct: 763 VSESLFVGESRNYGFQGGQNKYVGTGGIDQK--PRTLPRNRTFPIRGFQ--IYDGPIHLT 818

Query: 507 PATPKYATPAPSAKSS 522
            +T K   P P   SS
Sbjct: 819 RSTFKKYVPTPDRYSS 834


>gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]
          Length = 1383

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 447 ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEV 506
           +S+   V E  N     G  +++      +    R   RN+ F ++G    +YDGP++  
Sbjct: 826 VSESLFVGESRNYGFQGGQNKYVGTGGIDQK--PRTLPRNRTFPIRGFQ--IYDGPIHLT 881

Query: 507 PATPKYATPAPSAKSS 522
            +T K   P P   SS
Sbjct: 882 RSTFKKYVPTPDRYSS 897


>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
           sapiens]
          Length = 3118

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 379 QFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410
           Q+ AVT T    ++N+YPR G  +   D +V+
Sbjct: 167 QYHAVTDTECLTLYNIYPRTGPPSYAKDDEVI 198


>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
           sapiens]
          Length = 3122

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 379 QFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410
           Q+ AVT T    ++N+YPR G  +   D +V+
Sbjct: 167 QYHAVTDTECLTLYNIYPRTGPPSYAKDDEVI 198


>gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens]
          Length = 188

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 507 PATPKYATPAPSAKSSPSKHQPPPIRNLH--------QSNFSLSG-AQIDDNNPRRTGHR 557
           P     A PAP+A+  P+  + PP R L         Q+N  L    ++ ++  RR G R
Sbjct: 91  PCAEVRALPAPAAEPEPAWEEAPPERALELEGAPAKDQTNEELPEITEVPESIKRRLGRR 150

Query: 558 I-VAPPGGRSNI 568
           +  A P  R N+
Sbjct: 151 VPAATPAPRGNL 162


>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
          Length = 1332

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 11/69 (15%)

Query: 494  VSRGMYDGPVYEVPATPKYA----TPAPSAKSSPSKH-------QPPPIRNLHQSNFSLS 542
            V  G +DGP++  P  P       TP P     P          QPPP+ +LH+ +  L 
Sbjct: 1191 VPTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQPPPLGHLHRDSDWLR 1250

Query: 543  GAQIDDNNP 551
                  N+P
Sbjct: 1251 DISTCPNSP 1259


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 505 EVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRI 558
           E P+  K   P     + P    PPP+RN H+ + +   + +DD   + + H +
Sbjct: 352 EPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFESKYSFHPV 405


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,010,799
Number of Sequences: 37866
Number of extensions: 1102605
Number of successful extensions: 3715
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3694
Number of HSP's gapped (non-prelim): 20
length of query: 572
length of database: 18,247,518
effective HSP length: 108
effective length of query: 464
effective length of database: 14,157,990
effective search space: 6569307360
effective search space used: 6569307360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.