Guide to the Human Genome
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Search of human proteins with 4502841

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4502841 carbohydrate (keratan sulfate Gal-6)
sulfotransferase 1 [Homo sapiens]
         (411 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase...   836   0.0  
gi|19923281 chondroitin 6-sulfotransferase 3 [Homo sapiens]           303   2e-82
gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...   212   6e-55
gi|5031735 carbohydrate (N-acetylglucosamine 6-O) sulfotransfera...   205   5e-53
gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...   195   7e-50
gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...   182   4e-46
gi|23238228 chondroitin 6-sulfotransferase 7 [Homo sapiens]           178   7e-45
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]             45   1e-04
gi|169163967 PREDICTED: similar to voltage-dependent anion chann...    30   4.0  
gi|169164151 PREDICTED: similar to voltage-dependent anion chann...    30   4.0  
gi|113412878 PREDICTED: similar to voltage-dependent anion chann...    30   4.0  
gi|42476281 voltage-dependent anion channel 2 [Homo sapiens]           30   4.0  
gi|14211949 cAMP responsive element binding protein 3-like 3 [Ho...    30   4.0  
gi|54792094 WSC domain containing 1 [Homo sapiens]                     30   5.2  
gi|11497047 ADAM metallopeptidase domain 22 isoform 1 preproprot...    29   6.8  
gi|21536386 ADAM metallopeptidase domain 22 isoform 2 preproprot...    29   6.8  
gi|11497043 ADAM metallopeptidase domain 22 isoform 5 preproprot...    29   6.8  
gi|21536383 ADAM metallopeptidase domain 22 isoform 3 preproprot...    29   6.8  
gi|4757722 ADAM metallopeptidase domain 22 isoform 4 preproprote...    29   6.8  
gi|22758136 MAP7 domain containing 2 [Homo sapiens]                    29   6.8  
gi|31563386 sulfotransferase family, cytosolic, 2B, member 1 iso...    29   8.9  
gi|31563388 sulfotransferase family, cytosolic, 2B, member 1 iso...    29   8.9  

>gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
           [Homo sapiens]
          Length = 411

 Score =  836 bits (2160), Expect = 0.0
 Identities = 411/411 (100%), Positives = 411/411 (100%)

Query: 1   MQCSWKAVLLLALASIAIQYTAIRTFTAKSFHTCPGLAEAGLAERLCEESPTFAYNLSRK 60
           MQCSWKAVLLLALASIAIQYTAIRTFTAKSFHTCPGLAEAGLAERLCEESPTFAYNLSRK
Sbjct: 1   MQCSWKAVLLLALASIAIQYTAIRTFTAKSFHTCPGLAEAGLAERLCEESPTFAYNLSRK 60

Query: 61  THILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGAS 120
           THILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGAS
Sbjct: 61  THILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGAS 120

Query: 121 RDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEGD 180
           RDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEGD
Sbjct: 121 RDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEGD 180

Query: 181 CVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGIL 240
           CVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGIL
Sbjct: 181 CVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGIL 240

Query: 241 ASRSETFRDTYRLWRLWYGTGRKPYNLDVTQLTTVCEDFSNSVSTGLMRPPWLKGKYMLV 300
           ASRSETFRDTYRLWRLWYGTGRKPYNLDVTQLTTVCEDFSNSVSTGLMRPPWLKGKYMLV
Sbjct: 241 ASRSETFRDTYRLWRLWYGTGRKPYNLDVTQLTTVCEDFSNSVSTGLMRPPWLKGKYMLV 300

Query: 301 RYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHKYGTVRNSAATAEKW 360
           RYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHKYGTVRNSAATAEKW
Sbjct: 301 RYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHKYGTVRNSAATAEKW 360

Query: 361 RFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLVEERDFRPFS 411
           RFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLVEERDFRPFS
Sbjct: 361 RFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLVEERDFRPFS 411


>gi|19923281 chondroitin 6-sulfotransferase 3 [Homo sapiens]
          Length = 479

 Score =  303 bits (776), Expect = 2e-82
 Identities = 165/365 (45%), Positives = 224/365 (61%), Gaps = 10/365 (2%)

Query: 44  ERLCEESPTFAYNLSRKTHILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPR 103
           E+  EE P        + H+L++ATTR+GSSFVG+ FNQ  ++FYLFEPL+H++ T+   
Sbjct: 116 EQRKEEEPPRPAVAGPRRHVLLMATTRTGSSFVGEFFNQQGNIFYLFEPLWHIERTV--S 173

Query: 104 FTQGKSPADRRVMLGASRDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSR 163
           F  G + A    ++   RD+L+ L+ CDLY LE++I P P +H T  +FRRG+SR LC  
Sbjct: 174 FEPGGANAAGSALV--YRDVLKQLFLCDLYVLEHFITPLPEDHLTQFMFRRGSSRSLCED 231

Query: 164 PVCDPPGPADLVLEEGDCV-RKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVED 222
           PVC P      V E+  C  R+CG LN+T+AAEACR + H+A+K VR+ ++  L+ L ED
Sbjct: 232 PVCTPF--VKKVFEKYHCKNRRCGPLNVTLAAEACRRKEHMALKAVRIRQLEFLQPLAED 289

Query: 223 PRLNLKVIQLVRDPRGILASRSETFRDTYRLWRLWYGTGRKP--YNLDVTQLTTVCEDFS 280
           PRL+L+VIQLVRDPR +LASR   F   Y+ W+ W     +      +V +L   CE   
Sbjct: 290 PRLDLRVIQLVRDPRAVLASRMVAFAGKYKTWKKWLDDEGQDGLREEEVQRLRGNCESIR 349

Query: 281 NSVSTGLMRPPWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDP 340
            S   GL +P WL+G+YMLVRYED+AR P++K  E+Y F GIPL   V  WIQ NT+   
Sbjct: 350 LSAELGLRQPAWLRGRYMLVRYEDVARGPLQKAREMYRFAGIPLTPQVEDWIQKNTQAAH 409

Query: 341 TLGKHKYGTVRNSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVS 400
             G   Y T +NS+   EKWRF + + +    Q AC   +   GYK+A     L N SVS
Sbjct: 410 D-GSGIYSTQKNSSEQFEKWRFSMPFKLAQVVQAACGPAMRLFGYKLARDAAALTNRSVS 468

Query: 401 LVEER 405
           L+EER
Sbjct: 469 LLEER 473


>gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           6 [Homo sapiens]
          Length = 395

 Score =  212 bits (539), Expect = 6e-55
 Identities = 130/357 (36%), Positives = 184/357 (51%), Gaps = 17/357 (4%)

Query: 60  KTHILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGA 119
           + H+L+L++ RSGSSFVGQLFNQH DVFYL EP +HV  TL        S      +  A
Sbjct: 40  RVHVLVLSSWRSGSSFVGQLFNQHPDVFYLMEPAWHVWTTL--------SQGSAATLHMA 91

Query: 120 SRDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEG 179
            RDL+RS++ CD+   + Y+   P       +F+   SR LCS P C    P   +  E 
Sbjct: 92  VRDLVRSVFLCDMDVFDAYL---PWRRNLSDLFQWAVSRALCSPPACSA-FPRGAISSEA 147

Query: 180 DCVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGI 239
            C   C   + T+A EACR  SHV +K VR   +  L  L+ DP LNL+++ LVRDPR +
Sbjct: 148 VCKPLCARQSFTLAREACRSYSHVVLKEVRFFNLQVLYPLLSDPALNLRIVHLVRDPRAV 207

Query: 240 LASRSETFRDTYRLWRLWYGTGRKPYNLD--VTQLTTVCEDFSNSVSTGLMR-PPWLKGK 296
           L SR +T +   R   +  GT       D  +  +  VC           ++ PP+L+G+
Sbjct: 208 LRSREQTAKALARDNGIVLGTNGTWVEADPGLRVVREVCRSHVRIAEAATLKPPPFLRGR 267

Query: 297 YMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGD-PTLGKHKYGT-VRNSA 354
           Y LVR+EDLAR P+ +   +Y F G+ L   +  WI N T G  P   +  + T  RN+ 
Sbjct: 268 YRLVRFEDLAREPLAEIRALYAFTGLSLTPQLEAWIHNITHGSGPGARREAFKTSSRNAL 327

Query: 355 ATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLVEERDFRPFS 411
             ++ WR  L +  +   Q  C   L  LGY+   SE+E +N ++ LV  R    F+
Sbjct: 328 NVSQAWRHALPFAKIRRVQELCAGALQLLGYRPVYSEDEQRNLALDLVLPRGLNGFT 384


>gi|5031735 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           4 [Homo sapiens]
          Length = 386

 Score =  205 bits (522), Expect = 5e-53
 Identities = 127/351 (36%), Positives = 189/351 (53%), Gaps = 24/351 (6%)

Query: 60  KTHILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGA 119
           + H+L+L++ RSGSSFVGQLF QH DVFYL EP +HV  T    F Q  +     ++  A
Sbjct: 42  RMHVLVLSSWRSGSSFVGQLFGQHPDVFYLMEPAWHVWMT----FKQSTA----WMLHMA 93

Query: 120 SRDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEG 179
            RDL+R+++ CD+   + Y++P P   ++  +F+   SR LCS P CD   P D ++   
Sbjct: 94  VRDLIRAVFLCDMSVFDAYMEPGPRRQSS--LFQWENSRALCSAPACDII-PQDEIIPRA 150

Query: 180 DCVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGI 239
            C   C      V  +ACR  SHV +K VR   +  L  L++DP LNL ++ LVRDPR +
Sbjct: 151 HCRLLCSQQPFEVVEKACRSYSHVVLKEVRFFNLQSLYPLLKDPSLNLHIVHLVRDPRAV 210

Query: 240 LASRSETFRDTYRLWRLWYGTGRK-------PYNLDVTQLTTVCEDFSNSVSTGLMRPPW 292
             SR  T  D     R+  G   +       PY +    +  +C+       T    P  
Sbjct: 211 FRSRERTKGDLMIDSRIVMGQHEQKLKKEDQPYYV----MQVICQSQLEIYKTIQSLPKA 266

Query: 293 LKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHKYGT-VR 351
           L+ +Y+LVRYEDLAR P+ +T  +Y F+G+    H+  W+ N TRG   +G H + T  R
Sbjct: 267 LQERYLLVRYEDLARAPVAQTSRMYEFVGLEFLPHLQTWVHNITRG-KGMGDHAFHTNAR 325

Query: 352 NSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLV 402
           ++   ++ WR+ L Y+ V+  Q AC   +  LGY+   SE+E +N  + L+
Sbjct: 326 DALNVSQAWRWSLPYEKVSRLQKACGDAMNLLGYRHVRSEQEQRNLLLDLL 376


>gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           5 [Homo sapiens]
          Length = 411

 Score =  195 bits (495), Expect = 7e-50
 Identities = 124/358 (34%), Positives = 181/358 (50%), Gaps = 19/358 (5%)

Query: 60  KTHILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGA 119
           + H+L+L++ RSGSSF+GQLF+QH DVFYL EP +HV  TL        S      +  A
Sbjct: 62  RVHVLVLSSWRSGSSFLGQLFSQHPDVFYLMEPAWHVWTTL--------SQGSAATLHMA 113

Query: 120 SRDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEG 179
            RDL+RS++ CD+   + Y+   P +      F    SR LCS P C    P   + ++ 
Sbjct: 114 VRDLMRSIFLCDMDVFDAYM---PQSRNLSAFFNWATSRALCSPPACS-AFPRGTISKQD 169

Query: 180 DCVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGI 239
            C   C     ++A EACR  SHV +K VR   +  L  L+ DP LNL+++ LVRDPR +
Sbjct: 170 VCKTLCTRQPFSLAREACRSYSHVVLKEVRFFNLQVLYPLLSDPALNLRIVHLVRDPRAV 229

Query: 240 LASRSETFRDTYRLWRLWYGTGRKPYNLD--VTQLTTVCEDFSNSVSTGLMR-PPWLKGK 296
           L SR        R   +  GT  K    D  +  +  VC           ++ PP+L+G+
Sbjct: 230 LRSREAAGPILARDNGIVLGTNGKWVEADPHLRLIREVCRSHVRIAEAATLKPPPFLRGR 289

Query: 297 YMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGK---HKYGTVRNS 353
           Y LVR+EDLAR P+ +   +Y F G+ L   +  WI N T G   +GK     + + RN+
Sbjct: 290 YRLVRFEDLAREPLAEIRALYAFTGLTLTPQLEAWIHNITHGS-GIGKPIEAFHTSSRNA 348

Query: 354 AATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSVSLVEERDFRPFS 411
              ++ WR  L +  +   Q  C   L  LGY+   S ++ ++ ++ LV  R    FS
Sbjct: 349 RNVSQAWRHALPFTKILRVQEVCAGALQLLGYRPVYSADQQRDLTLDLVLPRGPDHFS 406


>gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase
           2 [Homo sapiens]
          Length = 530

 Score =  182 bits (463), Expect = 4e-46
 Identities = 119/369 (32%), Positives = 182/369 (49%), Gaps = 35/369 (9%)

Query: 63  ILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGASRD 122
           + +  T RSGSSF G+LFNQ+ +VF+L+EP++HV   L P         D   + GA+RD
Sbjct: 167 VYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYP--------GDAVSLQGAARD 218

Query: 123 LLRSLYDCDLYFLENYIKPPPV--NHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEGD 180
           +L +LY CDL   + Y        N TT  IF    ++V+CS P+C       + L +  
Sbjct: 219 MLSALYRCDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEVVGLVDDR 278

Query: 181 CVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGIL 240
             +KC    L    E CR+   + IK VRV +V  L  L+ DP L+LKVI LVRDPR + 
Sbjct: 279 VCKKCPPQRLARFEEECRKYRTLVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVA 338

Query: 241 ASRSET-------------FRDT------------YRLWRLWYGTGRKPYNLDVTQLTTV 275
           +SR  +              RD             ++L     G G       +  +  +
Sbjct: 339 SSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHKLGAKKEGVGGPADYHALGAMEVI 398

Query: 276 CEDFSNSVSTGLMRPPWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNN 335
           C   + ++ T L  P WL+G Y++VRYEDL  +P+K    +Y F+G+ +   + ++  N 
Sbjct: 399 CNSMAKTLQTALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNM 458

Query: 336 TRGDPTLGKHKYGTVRNSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELK 395
           T G  +  K    + RN+   A  WR  L++  +   +  C Q +A LGY+   S EE+K
Sbjct: 459 TSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYERVNSPEEVK 518

Query: 396 NPSVSLVEE 404
           + S +L+ +
Sbjct: 519 DLSKTLLRK 527


>gi|23238228 chondroitin 6-sulfotransferase 7 [Homo sapiens]
          Length = 486

 Score =  178 bits (452), Expect = 7e-45
 Identities = 132/417 (31%), Positives = 191/417 (45%), Gaps = 63/417 (15%)

Query: 36  GLAEAGLAERLCEE-----SPTFAYNLS---------RKTHILILATTRSGSSFVGQLFN 81
           G  E G   R  EE     SP F  NLS          K HI + AT R+GSSF+G+LFN
Sbjct: 63  GEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGELFN 122

Query: 82  QHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGASRDLLRSLYDCDLYFLENYI-- 139
           QH DVFYL+EP++H+   L         P D   + GA RD+LRSL+ CD   L  Y   
Sbjct: 123 QHPDVFYLYEPMWHLWQALY--------PGDAESLQGALRDMLRSLFRCDFSVLRLYAPP 174

Query: 140 ------KPPPVNHTTDRIFRRGASRVLCSRPVCD--PPGPADL-VLEEGDCVRKCGLLNL 190
                  P   N TT  +FR   ++V+CS P+C   P   A++ ++E+  C R C  + +
Sbjct: 175 GDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAI 234

Query: 191 TVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGI----LASRSET 246
                 CR+   V IK VR+ ++  L  L+ DP LNLKV+QL RDPR +    L SR   
Sbjct: 235 RALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGL 294

Query: 247 FRDTYRLWR------------LWYGTGRKPYNLD-------------VTQLTTVCEDFSN 281
            R++ ++ R            L +G G +P                    L  +CE +  
Sbjct: 295 LRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLR 354

Query: 282 SVSTGLMRPPWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPT 341
            +      P WL+ +Y+ +RYEDL R P  +   +  F G+   + +  +  N TRG   
Sbjct: 355 DLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAY 414

Query: 342 LGKHKYG-TVRNSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNP 397
                +  + R++      WR RLS + V   + AC   +  L Y  +  E + + P
Sbjct: 415 GADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQP 471


>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
          Length = 1222

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 293  LKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHKYGTVRN 352
            L   Y LV++ED+   P K TE I+ FLGIPL       I   T  +     ++ G +  
Sbjct: 1128 LPTSYQLVKFEDIVHFPQKTTERIFAFLGIPLSPASLNQILFATSTNLFYLPYE-GEI-- 1184

Query: 353  SAATAEKWRFRLSYDIVAFAQNACQQVLAQLGY 385
            S      W+  L  D +   +N C  ++ +LGY
Sbjct: 1185 SPTNTNVWKQNLPRDEIKLIENICWTLMDRLGY 1217


>gi|169163967 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 161 CSRPVCDPPGPADLVLEEGDCVRK---CGLLNLTVAAEAC 197
           C+RP+C PP  ADL     D   K    GL+ L V  ++C
Sbjct: 8   CARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSC 47


>gi|169164151 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 161 CSRPVCDPPGPADLVLEEGDCVRK---CGLLNLTVAAEAC 197
           C+RP+C PP  ADL     D   K    GL+ L V  ++C
Sbjct: 8   CARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSC 47


>gi|113412878 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 161 CSRPVCDPPGPADLVLEEGDCVRK---CGLLNLTVAAEAC 197
           C+RP+C PP  ADL     D   K    GL+ L V  ++C
Sbjct: 8   CARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSC 47


>gi|42476281 voltage-dependent anion channel 2 [Homo sapiens]
          Length = 294

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 161 CSRPVCDPPGPADLVLEEGDCVRK---CGLLNLTVAAEAC 197
           C+RP+C PP  ADL     D   K    GL+ L V  ++C
Sbjct: 8   CARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSC 47


>gi|14211949 cAMP responsive element binding protein 3-like 3 [Homo
           sapiens]
          Length = 461

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 45  RLCEESPTFAYNLSRKTHILILATTRSGSSFVGQLFNQHLDVFYLFEP 92
           R+C E P    +LS + ++ +     SGSS  G L   HL   YL  P
Sbjct: 160 RICAEKPADPVDLSPRCNLTVKDLLLSGSS--GDLQQHHLGASYLLRP 205


>gi|54792094 WSC domain containing 1 [Homo sapiens]
          Length = 575

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 292 WLK-GKYMLV-RYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRG 338
           WLK GK +LV  YE+L R+ +    E+  FL + +       ++NN  G
Sbjct: 478 WLKYGKRLLVVHYEELRRSLVPTLREMVAFLNVSVSEERLLCVENNKEG 526


>gi|11497047 ADAM metallopeptidase domain 22 isoform 1 preproprotein
           [Homo sapiens]
          Length = 906

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 166 CDPPGPADLVLEEGDCVRKCGLLNLTVAAE--ACRERSHVAIKTVRVPEVND 215
           CD   PA+ VLE  +C +KC L   +  ++   C++     + TV    VND
Sbjct: 458 CDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVND 509


>gi|21536386 ADAM metallopeptidase domain 22 isoform 2 preproprotein
           [Homo sapiens]
          Length = 899

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 166 CDPPGPADLVLEEGDCVRKCGLLNLTVAAE--ACRERSHVAIKTVRVPEVND 215
           CD   PA+ VLE  +C +KC L   +  ++   C++     + TV    VND
Sbjct: 458 CDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVND 509


>gi|11497043 ADAM metallopeptidase domain 22 isoform 5 preproprotein
           [Homo sapiens]
          Length = 823

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 166 CDPPGPADLVLEEGDCVRKCGLLNLTVAAE--ACRERSHVAIKTVRVPEVND 215
           CD   PA+ VLE  +C +KC L   +  ++   C++     + TV    VND
Sbjct: 458 CDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVND 509


>gi|21536383 ADAM metallopeptidase domain 22 isoform 3 preproprotein
           [Homo sapiens]
          Length = 870

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 166 CDPPGPADLVLEEGDCVRKCGLLNLTVAAE--ACRERSHVAIKTVRVPEVND 215
           CD   PA+ VLE  +C +KC L   +  ++   C++     + TV    VND
Sbjct: 458 CDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVND 509


>gi|4757722 ADAM metallopeptidase domain 22 isoform 4 preproprotein
           [Homo sapiens]
          Length = 859

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 166 CDPPGPADLVLEEGDCVRKCGLLNLTVAAE--ACRERSHVAIKTVRVPEVND 215
           CD   PA+ VLE  +C +KC L   +  ++   C++     + TV    VND
Sbjct: 458 CDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVND 509


>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
          Length = 732

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 10/68 (14%)

Query: 11  LALASIAIQYTAIRTFTAKSFHTCPGLAEAGLAERLCEESPTFAYNLSRKTHILILATTR 70
           L+ +++AI Y+  R F     H CP LA  G      + SPT   N+ +K      +T+ 
Sbjct: 185 LSSSTVAISYSPDRVF-----HVCPRLAPLGPLNPSYKSSPT--RNIEKKK---ATSTST 234

Query: 71  SGSSFVGQ 78
           SG+  VG+
Sbjct: 235 SGAGDVGK 242


>gi|31563386 sulfotransferase family, cytosolic, 2B, member 1
           isoform b [Homo sapiens]
          Length = 365

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 293 LKGK--YMLVRYEDLARNPMKKTEEIYGFLGIPL 324
           +KGK  ++ + YE+L ++     E I GFLG PL
Sbjct: 199 MKGKDNFLFITYEELQQDLQGSVERICGFLGRPL 232


>gi|31563388 sulfotransferase family, cytosolic, 2B, member 1
           isoform a [Homo sapiens]
          Length = 350

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 293 LKGK--YMLVRYEDLARNPMKKTEEIYGFLGIPL 324
           +KGK  ++ + YE+L ++     E I GFLG PL
Sbjct: 184 MKGKDNFLFITYEELQQDLQGSVERICGFLGRPL 217


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,208,534
Number of Sequences: 37866
Number of extensions: 735244
Number of successful extensions: 1355
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1319
Number of HSP's gapped (non-prelim): 23
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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