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Search of human proteins with 4502171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502171 adenine phosphoribosyltransferase isoform a [Homo
sapiens]
(180 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502171 adenine phosphoribosyltransferase isoform a [Homo sap... 356 7e-99
gi|71773201 adenine phosphoribosyltransferase isoform b [Homo sa... 266 9e-72
gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo sapi... 31 0.66
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 29 2.5
gi|223555933 dynein, axonemal, heavy polypeptide 14 isoform 2 [H... 29 2.5
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 2.5
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 2.5
gi|149944493 dynein, axonemal, heavy polypeptide 14 isoform 3 [H... 29 2.5
gi|13569870 ubiquitin related modifier 1 homolog isoform a [Homo... 28 3.3
gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sa... 28 3.3
gi|23397659 alpha/beta hydrolase domain containing protein 2 [Ho... 28 4.3
gi|23397661 alpha/beta hydrolase domain containing protein 2 [Ho... 28 4.3
gi|9910262 phosphoribosyl transferase domain containing 1 [Homo ... 28 5.6
gi|189409124 armadillo repeat containing 3 [Homo sapiens] 27 7.3
gi|18375650 protein tyrosine phosphatase, non-receptor type 13 i... 27 7.3
gi|18375648 protein tyrosine phosphatase, non-receptor type 13 i... 27 7.3
gi|18375646 protein tyrosine phosphatase, non-receptor type 13 i... 27 7.3
gi|5453992 protein tyrosine phosphatase, non-receptor type 13 is... 27 7.3
gi|4507835 uridine monophosphate synthase [Homo sapiens] 27 9.5
gi|33469919 minichromosome maintenance complex component 4 [Homo... 27 9.5
gi|33469917 minichromosome maintenance complex component 4 [Homo... 27 9.5
gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens] 27 9.5
>gi|4502171 adenine phosphoribosyltransferase isoform a [Homo
sapiens]
Length = 180
Score = 356 bits (913), Expect = 7e-99
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 1 MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY 60
MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY
Sbjct: 1 MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY 60
Query: 61 IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG 120
IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG
Sbjct: 61 IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG 120
Query: 121 QRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE 180
QRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE
Sbjct: 121 QRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE 180
>gi|71773201 adenine phosphoribosyltransferase isoform b [Homo
sapiens]
Length = 134
Score = 266 bits (679), Expect = 9e-72
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY 60
MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY
Sbjct: 1 MADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDY 60
Query: 61 IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG 120
IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG
Sbjct: 61 IAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPG 120
Query: 121 QRVVVVDDLLATG 133
QRVVVVDDLLATG
Sbjct: 121 QRVVVVDDLLATG 133
>gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
Length = 645
Score = 30.8 bits (68), Expect = 0.66
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 127 DDLLATGGTMNAACELLGRLQAEVLECVSLVE 158
D +L T G N AC LLG+L+ LEC L+E
Sbjct: 436 DVVLLTAGEHNKACSLLGKLR---LECADLLE 464
>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
sapiens]
Length = 4515
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 85 LIRKRGKLPGPTLWASYSLEYGKAELEIQKDALE 118
+IR R KL T+ +SL+YG +++ IQK L+
Sbjct: 133 IIRLREKLGWQTILPQHSLKYGSSKIAIQKITLK 166
>gi|223555933 dynein, axonemal, heavy polypeptide 14 isoform 2 [Homo
sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 85 LIRKRGKLPGPTLWASYSLEYGKAELEIQKDALE 118
+IR R KL T+ +SL+YG +++ IQK L+
Sbjct: 133 IIRLREKLGWQTILPQHSLKYGSSKIAIQKITLK 166
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 28.9 bits (63), Expect = 2.5
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 11 QRIRSFPDFPTPGVVFRDISPVLKDPAS----FRAAIGLLARHLKATHGGRIDYIAGL 64
QR R P+ PG + P PAS FRA +GL + GG D + GL
Sbjct: 410 QRARQTPEAHPPGACVGILGPPATIPASDRVYFRATVGLSCDAHEKQAGGGADPLQGL 467
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 28.9 bits (63), Expect = 2.5
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 11 QRIRSFPDFPTPGVVFRDISPVLKDPAS----FRAAIGLLARHLKATHGGRIDYIAGL 64
QR R P+ PG + P PAS FRA +GL + GG D + GL
Sbjct: 384 QRARQTPEAHPPGACVGILGPPATIPASDRVYFRATVGLSCDAHEKQAGGGADPLQGL 441
>gi|149944493 dynein, axonemal, heavy polypeptide 14 isoform 3 [Homo
sapiens]
Length = 228
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 85 LIRKRGKLPGPTLWASYSLEYGKAELEIQKDALE 118
+IR R KL T+ +SL+YG +++ IQK L+
Sbjct: 133 IIRLREKLGWQTILPQHSLKYGSSKIAIQKITLK 166
>gi|13569870 ubiquitin related modifier 1 homolog isoform a [Homo
sapiens]
Length = 101
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 97 LWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSL 156
+W +L + EL IQ D++ PG V++ D A ELLG L ++ + S+
Sbjct: 43 IWIKKNLLKERPELFIQGDSVRPGILVLIND----------ADWELLGELDYQLQDQDSV 92
Query: 157 VELTSLKG 164
+ +++L G
Sbjct: 93 LFISTLHG 100
>gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo
sapiens]
Length = 1012
Score = 28.5 bits (62), Expect = 3.3
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 28 DISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIR 87
D S +L + R L + ++ G R+ ++GL G +L +G+G + +
Sbjct: 5 DASKLLDEELYSRQLYVLGSPAMQRIQGARV-LVSGLQGLGAEVAKNLVL-MGVGSLTLH 62
Query: 88 KRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELL---G 144
P PT W+ + ++ +E ++++ E Q +LLA +N A +++ G
Sbjct: 63 D----PHPTCWSDLAAQFLLSEQDLERSRAEASQ------ELLA---QLNRAVQVVVHTG 109
Query: 145 RLQAEVLECVSLVELTSLKGREKL 168
+ ++L +V LT+ K E+L
Sbjct: 110 DITEDLLLDFQVVVLTAAKLEEQL 133
>gi|23397659 alpha/beta hydrolase domain containing protein 2 [Homo
sapiens]
Length = 425
Score = 28.1 bits (61), Expect = 4.3
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 76 AQELGLGCVLIRKRGKLPGPTLWASYSLEYG-----KAELEIQKDALEPGQRVVVVDDLL 130
AQ+ G C ++ G LP L + YG A + K Q VVV L
Sbjct: 150 AQKNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNYIKKTYPLTQLVVVGFSL- 208
Query: 131 ATGGTMNAACELLGRLQA---EVLECVSLVE-LTSLKGRE 166
GG N C+ LG QA +VL CVS+ + ++L+ +E
Sbjct: 209 --GG--NIVCKYLGETQANQEKVLCCVSVCQGYSALRAQE 244
>gi|23397661 alpha/beta hydrolase domain containing protein 2 [Homo
sapiens]
Length = 425
Score = 28.1 bits (61), Expect = 4.3
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 76 AQELGLGCVLIRKRGKLPGPTLWASYSLEYG-----KAELEIQKDALEPGQRVVVVDDLL 130
AQ+ G C ++ G LP L + YG A + K Q VVV L
Sbjct: 150 AQKNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNYIKKTYPLTQLVVVGFSL- 208
Query: 131 ATGGTMNAACELLGRLQA---EVLECVSLVE-LTSLKGRE 166
GG N C+ LG QA +VL CVS+ + ++L+ +E
Sbjct: 209 --GG--NIVCKYLGETQANQEKVLCCVSVCQGYSALRAQE 244
>gi|9910262 phosphoribosyl transferase domain containing 1 [Homo
sapiens]
Length = 225
Score = 27.7 bits (60), Expect = 5.6
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 120 GQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLV 157
G+ V++V+D++ TG TM A + + + +++ SL+
Sbjct: 134 GKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLL 171
>gi|189409124 armadillo repeat containing 3 [Homo sapiens]
Length = 872
Score = 27.3 bits (59), Expect = 7.3
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 24/78 (30%)
Query: 67 RGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKA--ELEIQKDALE------ 118
R LF +LA +G+GC L+R EYG+A E+ +Q D+ +
Sbjct: 798 RALLF-KALADRIGIGCSLVRG---------------EYGRAWNEVMLQNDSRKGVIGGL 841
Query: 119 PGQRVVVVDDLLATGGTM 136
P + V+D + GG M
Sbjct: 842 PAPEMYVIDLMFHPGGLM 859
>gi|18375650 protein tyrosine phosphatase, non-receptor type 13
isoform 4 [Homo sapiens]
Length = 2490
Score = 27.3 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 106 GKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGR 165
G A+L+ L+PG R++ V+ + G + +AA E+L +V +S + +
Sbjct: 1130 GPADLD---GCLKPGDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVIS-------QPK 1179
Query: 166 EKLAPVP 172
EK++ VP
Sbjct: 1180 EKISKVP 1186
>gi|18375648 protein tyrosine phosphatase, non-receptor type 13
isoform 3 [Homo sapiens]
Length = 2294
Score = 27.3 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 106 GKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGR 165
G A+L+ L+PG R++ V+ + G + +AA E+L +V +S + +
Sbjct: 939 GPADLD---GCLKPGDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVIS-------QPK 988
Query: 166 EKLAPVP 172
EK++ VP
Sbjct: 989 EKISKVP 995
>gi|18375646 protein tyrosine phosphatase, non-receptor type 13
isoform 1 [Homo sapiens]
Length = 2485
Score = 27.3 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 106 GKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGR 165
G A+L+ L+PG R++ V+ + G + +AA E+L +V +S + +
Sbjct: 1130 GPADLD---GCLKPGDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVIS-------QPK 1179
Query: 166 EKLAPVP 172
EK++ VP
Sbjct: 1180 EKISKVP 1186
>gi|5453992 protein tyrosine phosphatase, non-receptor type 13 isoform
2 [Homo sapiens]
Length = 2466
Score = 27.3 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 106 GKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGR 165
G A+L+ L+PG R++ V+ + G + +AA E+L +V +S + +
Sbjct: 1111 GPADLD---GCLKPGDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVIS-------QPK 1160
Query: 166 EKLAPVP 172
EK++ VP
Sbjct: 1161 EKISKVP 1167
>gi|4507835 uridine monophosphate synthase [Homo sapiens]
Length = 480
Score = 26.9 bits (58), Expect = 9.5
Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 104 EYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLK 163
+YG L + + PG+ ++++D++ +G ++ E+L + +V + + L++
Sbjct: 102 DYGTKRLV--EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLD-REQG 158
Query: 164 GREKL 168
G++KL
Sbjct: 159 GKDKL 163
>gi|33469919 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 26.9 bits (58), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 85 LIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGG 134
LI +GK P + G++++ I KD E R + DD L G
Sbjct: 808 LILSKGKTPALKYQQLFEDIRGQSDIAITKDMFEEALRALADDDFLTVTG 857
>gi|33469917 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 26.9 bits (58), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 85 LIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGG 134
LI +GK P + G++++ I KD E R + DD L G
Sbjct: 808 LILSKGKTPALKYQQLFEDIRGQSDIAITKDMFEEALRALADDDFLTVTG 857
>gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens]
Length = 2179
Score = 26.9 bits (58), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 72 GPSLAQELGLGCVLIRKRGK 91
GPS +LG CVL++++GK
Sbjct: 2140 GPSQRSKLGKSCVLVQRQGK 2159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.141 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,262,717
Number of Sequences: 37866
Number of extensions: 312256
Number of successful extensions: 597
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 583
Number of HSP's gapped (non-prelim): 26
length of query: 180
length of database: 18,247,518
effective HSP length: 96
effective length of query: 84
effective length of database: 14,612,382
effective search space: 1227440088
effective search space used: 1227440088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.