Search of human proteins with 42560225

Search of human proteins with 42560225

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42560225 recombining binding protein suppressor of hairless
isoform 3 [Homo sapiens]
         (485 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42560225 recombining binding protein suppressor of hairless i...   993   0.0  
gi|42560223 recombining binding protein suppressor of hairless i...   983   0.0  
gi|42560229 recombining binding protein suppressor of hairless i...   981   0.0  
gi|42560227 recombining binding protein suppressor of hairless i...   981   0.0  
gi|34577081 recombining binding protein L [Homo sapiens]              489   e-138
gi|24497506 forkhead box A3 [Homo sapiens]                             31   2.9  
gi|139948432 adlican [Homo sapiens]                                    30   4.9  
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]          30   6.4  
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]           30   6.4  
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            29   8.4  
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            29   8.4  

>gi|42560225 recombining binding protein suppressor of hairless
           isoform 3 [Homo sapiens]
          Length = 485

 Score =  993 bits (2568), Expect = 0.0
 Identities = 485/485 (100%), Positives = 485/485 (100%)

Query: 1   MGGCRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYL 60
           MGGCRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYL
Sbjct: 1   MGGCRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYL 60

Query: 61  MGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDK 120
           MGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDK
Sbjct: 61  MGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDK 120

Query: 121 RKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRS 180
           RKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRS
Sbjct: 121 RKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRS 180

Query: 181 QTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVT 240
           QTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVT
Sbjct: 181 QTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVT 240

Query: 241 GMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPK 300
           GMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPK
Sbjct: 241 GMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPK 300

Query: 301 EPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTG 360
           EPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTG
Sbjct: 301 EPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTG 360

Query: 361 QNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGII 420
           QNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGII
Sbjct: 361 QNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGII 420

Query: 421 YSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSST 480
           YSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSST
Sbjct: 421 YSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSST 480

Query: 481 ATVVS 485
           ATVVS
Sbjct: 481 ATVVS 485


>gi|42560223 recombining binding protein suppressor of hairless
           isoform 4 [Homo sapiens]
          Length = 486

 Score =  983 bits (2542), Expect = 0.0
 Identities = 481/481 (100%), Positives = 481/481 (100%)

Query: 5   RKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG 64
           RKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG
Sbjct: 6   RKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG 65

Query: 65  WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF 124
           WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF
Sbjct: 66  WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF 125

Query: 125 MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS 184
           MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS
Sbjct: 126 MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS 185

Query: 185 TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL 244
           TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL
Sbjct: 186 TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL 245

Query: 245 PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK 304
           PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK
Sbjct: 246 PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK 305

Query: 305 EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT 364
           EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT
Sbjct: 306 EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT 365

Query: 365 PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS 424
           PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS
Sbjct: 366 PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS 425

Query: 425 LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV 484
           LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV
Sbjct: 426 LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV 485

Query: 485 S 485
           S
Sbjct: 486 S 486


>gi|42560229 recombining binding protein suppressor of hairless
           isoform 2 [Homo sapiens]
          Length = 487

 Score =  981 bits (2537), Expect = 0.0
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 6   KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 65
           KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW
Sbjct: 8   KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 67

Query: 66  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 125
           KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM
Sbjct: 68  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 127

Query: 126 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 185
           LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST
Sbjct: 128 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 187

Query: 186 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 245
           RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP
Sbjct: 188 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 247

Query: 246 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 305
           RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE
Sbjct: 248 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 307

Query: 306 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 365
           MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP
Sbjct: 308 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 367

Query: 366 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 425
           NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL
Sbjct: 368 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 427

Query: 426 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 485
           TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS
Sbjct: 428 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 487


>gi|42560227 recombining binding protein suppressor of hairless
           isoform 1 [Homo sapiens]
          Length = 500

 Score =  981 bits (2537), Expect = 0.0
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 6   KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 65
           KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW
Sbjct: 21  KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 80

Query: 66  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 125
           KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM
Sbjct: 81  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 140

Query: 126 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 185
           LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST
Sbjct: 141 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 200

Query: 186 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 245
           RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP
Sbjct: 201 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 260

Query: 246 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 305
           RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE
Sbjct: 261 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 320

Query: 306 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 365
           MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP
Sbjct: 321 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 380

Query: 366 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 425
           NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL
Sbjct: 381 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 440

Query: 426 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 485
           TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS
Sbjct: 441 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 500


>gi|34577081 recombining binding protein L [Homo sapiens]
          Length = 517

 Score =  489 bits (1258), Expect = e-138
 Identities = 240/438 (54%), Positives = 314/438 (71%), Gaps = 12/438 (2%)

Query: 11  PPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKE 70
           P    + R  +R  L+++ +QTV ILHAKVAQKSYGNEKRFFCPPPCVYL G GW+ K  
Sbjct: 47  PEHTTILRGGVRRCLQQQCEQTVRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPG 106

Query: 71  QMERDGCSEQESQPCAFIGIGN---SDQEMQQLNLE----GKNYCTAKTLYISDSDKRKH 123
           Q +     E     C ++G+ +   S  E Q+LN E     + +  AKTLYISD+DKRKH
Sbjct: 107 QDQAHQAGETGPTVCGYMGLDSASGSATETQKLNFEQQPDSREFGCAKTLYISDADKRKH 166

Query: 124 FMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTV 183
           F L +++      ++G F S+ IKVISKPS+KKQSLKN DLCI+SG+KV+LFNRLRSQTV
Sbjct: 167 FRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTDLCISSGSKVSLFNRLRSQTV 226

Query: 184 STRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMA 243
           STRYL VE G F AS++QW AF +HL D   ++G+ F  R+GY+ YG  V+LVC+VTG+ 
Sbjct: 227 STRYLSVEDGAFVASARQWAAFTLHLADGHSAQGD-FPPREGYVRYGSLVQLVCTVTGIT 285

Query: 244 LPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTER----MYLCLSQERIIQFQATPCP 299
           LP +IIRKV KQ ALLD D+P+SQLHKCAF    +       YLCL+ E+++QFQA+PCP
Sbjct: 286 LPPMIIRKVAKQCALLDVDEPISQLHKCAFQFPGSPPGGGGTYLCLATEKVVQFQASPCP 345

Query: 300 KEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELT 359
           KE N+ ++ND + WTII T+  E++F   +   L PVTPVP++ +L+L+GGGDVA LEL 
Sbjct: 346 KEANRALLNDSSCWTIIGTESVEFSFSTSLACTLEPVTPVPLISTLELSGGGDVATLELH 405

Query: 360 GQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGI 419
           G+NF   L+VWFGDVEAETMYR   S++CVVPD++AF   WRW+R P+ +P++LVR DG+
Sbjct: 406 GENFHAGLKVWFGDVEAETMYRSPRSLVCVVPDVAAFCSDWRWLRAPITIPMSLVRADGL 465

Query: 420 IYSTSLTFTYTPEPGPRP 437
            Y ++ +FTYTPE   RP
Sbjct: 466 FYPSAFSFTYTPEYSVRP 483


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 319 DKAEYTFYEGMGPVLAPVTPVPVVESL 345
           D AE+++Y   G V +PVTPVP +  L
Sbjct: 11  DLAEWSYYPEAGEVYSPVTPVPTMAPL 37


>gi|139948432 adlican [Homo sapiens]
          Length = 2828

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 227  IHYGQTVKLVCSVTGMALPRLIIRKVDKQ--TALLDADDPVSQLHKCAFYLKDTERM--- 281
            + YG T+KL CS +G   PR++ R   K+   AL   D  +         +K        
Sbjct: 2158 VRYGGTLKLDCSASGDPWPRILWRLPSKRMIDALFSFDSRIKVFANGTLVVKSVTDKDAG 2217

Query: 282  -YLCLSQERI 290
             YLC+++ ++
Sbjct: 2218 DYLCVARNKV 2227


>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
          Length = 956

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 230 GQTVKLVCSVTGMALPRLIIRKVDKQTALLD 260
           G T++L C VTG   P ++  + DK+ A+ D
Sbjct: 458 GDTIELQCQVTGKPKPIILWSRADKEVAMPD 488


>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
          Length = 727

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 230 GQTVKLVCSVTGMALPRLIIRKVDKQTALLD 260
           G T++L C VTG   P ++  + DK+ A+ D
Sbjct: 229 GDTIELQCQVTGKPKPIILWSRADKEVAMPD 259


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 422 STS-LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSY-TNASTNSTSVTSS 479
           STS L+ T TP P P    S     + +NSS    + +++ S  S+ T++ T STS+TS+
Sbjct: 86  STSVLSSTITPAP-PMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITST 144

Query: 480 TAT 482
           ++T
Sbjct: 145 SST 147


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 422 STS-LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSY-TNASTNSTSVTSS 479
           STS L+ T TP P P    S     + +NSS    + +++ S  S+ T++ T STS+TS+
Sbjct: 86  STSVLSSTITPAP-PMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITST 144

Query: 480 TAT 482
           ++T
Sbjct: 145 SST 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,943,066
Number of Sequences: 37866
Number of extensions: 919390
Number of successful extensions: 2629
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2602
Number of HSP's gapped (non-prelim): 27
length of query: 485
length of database: 18,247,518
effective HSP length: 106
effective length of query: 379
effective length of database: 14,233,722
effective search space: 5394580638
effective search space used: 5394580638
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.