Guide to the Human Genome
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Name: LPCAT3 Sequence: fasta or formatted (487aa) NCBI GI: 42542394
Description:

lysophosphatidylcholine acyltransferase 3

Referenced in:

Lipid Metabolism
Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         31           2
 C cysteine            1.8          9           1
 D aspartate           2.3         11           1
 E glutamate           4.1         20           2
 F phenylalanine       8.0         39           2
 G glycine             7.2         35           2
 H histidine           2.7         13           1
 I isoleucine          6.4         31           2
 K lysine              5.5         27           2
 L leucine            15.2         74           2
 M methionine          2.9         14           1
 N asparagine          3.1         15           1
 P proline             2.9         14           1
 Q glutamine           3.7         18           2
 R arginine            2.7         13           1
 S serine              5.5         27           2
 T threonine           5.7         28           2
 V valine              5.1         25           2
 W tryptophan          2.3         11           1
 Y tyrosine            6.6         32           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysophosphatidylcholine acyltransferase 3 
MBOAT2                0.115   O-acyltransferase (membrane bound) domain containing...
MBOAT1                0.100   membrane bound O-acyltransferase domain containing ...
MBOAT7                0.059   membrane bound O-acyltransferase domain containing ...
MBOAT7                0.047   membrane bound O-acyltransferase domain containing ...
MBOAT7                0.047   membrane bound O-acyltransferase domain containing ...
PORCN                 0.036   porcupine isoform E 
PORCN                 0.036   porcupine isoform B 
PORCN                 0.036   porcupine isoform A 
MBOAT7                0.035   membrane bound O-acyltransferase domain containing ...
PORCN                 0.033   porcupine isoform C 
PORCN                 0.031   porcupine isoform D 
MBOAT4                0.024   membrane bound O-acyltransferase domain containing ...
CLN8                  0.005   ceroid-lipofuscinosis, neuronal 8 
HHAT                  0.005   hedgehog acyltransferase 
HHAT                  0.005   hedgehog acyltransferase 
LOC100133772          0.005   PREDICTED: similar to solute carrier family 16, mem...
NAALAD2               0.005   N-acetylated alpha-linked acidic dipeptidase 2 
SLC16A5               0.005   solute carrier family 16, member 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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