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Search of human proteins with 41393547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41393547 neuroblastoma-amplified protein [Homo sapiens]
(2371 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41393547 neuroblastoma-amplified protein [Homo sapiens] 4763 0.0
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [... 37 0.18
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 37 0.18
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 37 0.18
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 36 0.39
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 36 0.51
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 36 0.51
gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H... 35 0.88
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 35 1.1
gi|55956890 kelch/ankyrin repeat containing cyclin A1 interactin... 35 1.1
gi|55956888 kelch/ankyrin repeat containing cyclin A1 interactin... 35 1.1
gi|169217489 PREDICTED: similar to phosphodiesterase 4D interact... 34 1.5
gi|50658077 phosphodiesterase 4D interacting protein isoform 4 [... 34 2.0
gi|50658075 phosphodiesterase 4D interacting protein isoform 3 [... 34 2.0
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 34 2.0
gi|34222391 zinc finger protein 605 [Homo sapiens] 34 2.0
gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens] 33 2.6
gi|223005857 WD repeat domain 67 isoform 2 [Homo sapiens] 33 2.6
gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... 33 2.6
gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo... 33 4.4
gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Hom... 33 4.4
gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Hom... 33 4.4
gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Hom... 33 4.4
gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Hom... 33 4.4
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ... 33 4.4
gi|199559532 Abelson helper integration site 1 isoform b [Homo s... 33 4.4
gi|199559490 Abelson helper integration site 1 isoform a [Homo s... 33 4.4
gi|199559438 Abelson helper integration site 1 isoform a [Homo s... 33 4.4
gi|31542701 Abelson helper integration site 1 isoform a [Homo sa... 33 4.4
gi|24308069 zinc finger protein 521 [Homo sapiens] 33 4.4
>gi|41393547 neuroblastoma-amplified protein [Homo sapiens]
Length = 2371
Score = 4763 bits (12355), Expect = 0.0
Identities = 2371/2371 (100%), Positives = 2371/2371 (100%)
Query: 1 MAAPESGPALSPGTAEGEEETILYDLLVNTEWPPETEVQPRGNQKHGASFIITKAIRDRL 60
MAAPESGPALSPGTAEGEEETILYDLLVNTEWPPETEVQPRGNQKHGASFIITKAIRDRL
Sbjct: 1 MAAPESGPALSPGTAEGEEETILYDLLVNTEWPPETEVQPRGNQKHGASFIITKAIRDRL 60
Query: 61 LFLRQYIWYSPAPFLLPDGLVRLVNKQINWHLVLASNGKLLAAVQDQCVEIRSAKDDFTS 120
LFLRQYIWYSPAPFLLPDGLVRLVNKQINWHLVLASNGKLLAAVQDQCVEIRSAKDDFTS
Sbjct: 61 LFLRQYIWYSPAPFLLPDGLVRLVNKQINWHLVLASNGKLLAAVQDQCVEIRSAKDDFTS 120
Query: 121 IIGKCQVPKDPKPQWRRVAWSYDCTLLAYAESTGTVRVFDLMGSELFVISPASSFIGDLS 180
IIGKCQVPKDPKPQWRRVAWSYDCTLLAYAESTGTVRVFDLMGSELFVISPASSFIGDLS
Sbjct: 121 IIGKCQVPKDPKPQWRRVAWSYDCTLLAYAESTGTVRVFDLMGSELFVISPASSFIGDLS 180
Query: 181 YAIAGLIFLEYKASAQWSAELLVINYRGELRSYLVSVGTNQSYQESHCFSFSSHYPHGIN 240
YAIAGLIFLEYKASAQWSAELLVINYRGELRSYLVSVGTNQSYQESHCFSFSSHYPHGIN
Sbjct: 181 YAIAGLIFLEYKASAQWSAELLVINYRGELRSYLVSVGTNQSYQESHCFSFSSHYPHGIN 240
Query: 241 TAIYHPGHRLLLVGGCETAEVGMSKASSCGLSAWRVLSGSPYYKQVTNGGDGVTAVPKTL 300
TAIYHPGHRLLLVGGCETAEVGMSKASSCGLSAWRVLSGSPYYKQVTNGGDGVTAVPKTL
Sbjct: 241 TAIYHPGHRLLLVGGCETAEVGMSKASSCGLSAWRVLSGSPYYKQVTNGGDGVTAVPKTL 300
Query: 301 GLLRMLSVKFYSRQGQEQDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLKQQGEWGQNE 360
GLLRMLSVKFYSRQGQEQDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLKQQGEWGQNE
Sbjct: 301 GLLRMLSVKFYSRQGQEQDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLKQQGEWGQNE 360
Query: 361 QPGYDDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKN 420
QPGYDDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKN
Sbjct: 361 QPGYDDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKN 420
Query: 421 LLGKSCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEIS 480
LLGKSCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEIS
Sbjct: 421 LLGKSCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEIS 480
Query: 481 AKARYFGYIKQGLYLVTEMERFAPPRKRPRTITKNYRLVSLRSTTPEELYQRKIESEEYE 540
AKARYFGYIKQGLYLVTEMERFAPPRKRPRTITKNYRLVSLRSTTPEELYQRKIESEEYE
Sbjct: 481 AKARYFGYIKQGLYLVTEMERFAPPRKRPRTITKNYRLVSLRSTTPEELYQRKIESEEYE 540
Query: 541 EALSLAHTYGLDTDLVYQRQWRKSAVNVASIQNYLSKIKKRSWVLHECLERVPENVDAAK 600
EALSLAHTYGLDTDLVYQRQWRKSAVNVASIQNYLSKIKKRSWVLHECLERVPENVDAAK
Sbjct: 541 EALSLAHTYGLDTDLVYQRQWRKSAVNVASIQNYLSKIKKRSWVLHECLERVPENVDAAK 600
Query: 601 ELLQYGLKGTDLEALLAIGKGADDGRFTLPGEIDIDSISYEELSPPDEEPAKNKKEKELK 660
ELLQYGLKGTDLEALLAIGKGADDGRFTLPGEIDIDSISYEELSPPDEEPAKNKKEKELK
Sbjct: 601 ELLQYGLKGTDLEALLAIGKGADDGRFTLPGEIDIDSISYEELSPPDEEPAKNKKEKELK 660
Query: 661 KRQELLKLVNFSKLTLEQKELCRCRRKLLTYLDRLATYEEILGVPHASEQRYDAEFFKKF 720
KRQELLKLVNFSKLTLEQKELCRCRRKLLTYLDRLATYEEILGVPHASEQRYDAEFFKKF
Sbjct: 661 KRQELLKLVNFSKLTLEQKELCRCRRKLLTYLDRLATYEEILGVPHASEQRYDAEFFKKF 720
Query: 721 RNQNIVLSARTYAQESNVQALEILFTYHGSDLLPHRLAILSNFPETTSPHEYSVLLPEAC 780
RNQNIVLSARTYAQESNVQALEILFTYHGSDLLPHRLAILSNFPETTSPHEYSVLLPEAC
Sbjct: 721 RNQNIVLSARTYAQESNVQALEILFTYHGSDLLPHRLAILSNFPETTSPHEYSVLLPEAC 780
Query: 781 FNGDSLMIIPWHEHKHRAKDWCEELACRMVVEPNLQDESEFLYAAQPELLRFRMTQLTVE 840
FNGDSLMIIPWHEHKHRAKDWCEELACRMVVEPNLQDESEFLYAAQPELLRFRMTQLTVE
Sbjct: 781 FNGDSLMIIPWHEHKHRAKDWCEELACRMVVEPNLQDESEFLYAAQPELLRFRMTQLTVE 840
Query: 841 KVMDWYQTRAEEIEHYARQVDCALSLIRLGMERNIPGLLVLCDNLVTLETLVYEARCDVT 900
KVMDWYQTRAEEIEHYARQVDCALSLIRLGMERNIPGLLVLCDNLVTLETLVYEARCDVT
Sbjct: 841 KVMDWYQTRAEEIEHYARQVDCALSLIRLGMERNIPGLLVLCDNLVTLETLVYEARCDVT 900
Query: 901 LTLKELQQMKDIEKLRLLMNSCSEDKYVTSAYQWMVPFLHRCEKQSPGVANELLKEYLVT 960
LTLKELQQMKDIEKLRLLMNSCSEDKYVTSAYQWMVPFLHRCEKQSPGVANELLKEYLVT
Sbjct: 901 LTLKELQQMKDIEKLRLLMNSCSEDKYVTSAYQWMVPFLHRCEKQSPGVANELLKEYLVT 960
Query: 961 LAKGDLKFPLKIFQHSKPDLQQKIIPDQDQLMAIALECIYTCERNDQLCLCYDLLECLPE 1020
LAKGDLKFPLKIFQHSKPDLQQKIIPDQDQLMAIALECIYTCERNDQLCLCYDLLECLPE
Sbjct: 961 LAKGDLKFPLKIFQHSKPDLQQKIIPDQDQLMAIALECIYTCERNDQLCLCYDLLECLPE 1020
Query: 1021 RGYGDKTEATTKLHDMVDQLEQILSVSELLEKHGLEKPISFVKNTQSSSEEARKLMVRLT 1080
RGYGDKTEATTKLHDMVDQLEQILSVSELLEKHGLEKPISFVKNTQSSSEEARKLMVRLT
Sbjct: 1021 RGYGDKTEATTKLHDMVDQLEQILSVSELLEKHGLEKPISFVKNTQSSSEEARKLMVRLT 1080
Query: 1081 RHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDSDACYEIFTESLLCSSRLENIHLAGQ 1140
RHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDSDACYEIFTESLLCSSRLENIHLAGQ
Sbjct: 1081 RHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDSDACYEIFTESLLCSSRLENIHLAGQ 1140
Query: 1141 MMHCSACSENPPAGIAHKGKPHYRVSYEKSIDLVLAASREYFNSSTNLTDSCMDLARCCL 1200
MMHCSACSENPPAGIAHKGKPHYRVSYEKSIDLVLAASREYFNSSTNLTDSCMDLARCCL
Sbjct: 1141 MMHCSACSENPPAGIAHKGKPHYRVSYEKSIDLVLAASREYFNSSTNLTDSCMDLARCCL 1200
Query: 1201 QLITDRPPAIQEELDLIQAVGCLEEFGVKILPLQVRLCPDRISLIKECISQSPTCYKQST 1260
QLITDRPPAIQEELDLIQAVGCLEEFGVKILPLQVRLCPDRISLIKECISQSPTCYKQST
Sbjct: 1201 QLITDRPPAIQEELDLIQAVGCLEEFGVKILPLQVRLCPDRISLIKECISQSPTCYKQST 1260
Query: 1261 KLLGLAELLRVAGENPEERRGQVLILLVEQALRFHDYKAASMHCQELMATGYPKSWDVCS 1320
KLLGLAELLRVAGENPEERRGQVLILLVEQALRFHDYKAASMHCQELMATGYPKSWDVCS
Sbjct: 1261 KLLGLAELLRVAGENPEERRGQVLILLVEQALRFHDYKAASMHCQELMATGYPKSWDVCS 1320
Query: 1321 QLGQSEGYQDLATRQELMAFALTHCPPSSIELLLAASSSLQTEILYQRVNFQIHHEGGEN 1380
QLGQSEGYQDLATRQELMAFALTHCPPSSIELLLAASSSLQTEILYQRVNFQIHHEGGEN
Sbjct: 1321 QLGQSEGYQDLATRQELMAFALTHCPPSSIELLLAASSSLQTEILYQRVNFQIHHEGGEN 1380
Query: 1381 ISASPLTSKAVQEDEVGVPGSNSADLLRWTTATTMKVLSNTTTTTKAVLQAVSDGQWWKK 1440
ISASPLTSKAVQEDEVGVPGSNSADLLRWTTATTMKVLSNTTTTTKAVLQAVSDGQWWKK
Sbjct: 1381 ISASPLTSKAVQEDEVGVPGSNSADLLRWTTATTMKVLSNTTTTTKAVLQAVSDGQWWKK 1440
Query: 1441 SLTYLRPLQGQKCGGAYQIGTTANEDLEKQGCHPFYESVISNPFVAESEGTYDTYQHVPV 1500
SLTYLRPLQGQKCGGAYQIGTTANEDLEKQGCHPFYESVISNPFVAESEGTYDTYQHVPV
Sbjct: 1441 SLTYLRPLQGQKCGGAYQIGTTANEDLEKQGCHPFYESVISNPFVAESEGTYDTYQHVPV 1500
Query: 1501 ESFAEVLLRTGKLAEAKNKGEVFPTTEVLLQLASEALPNDMTLALAYLLALPQVLDANRC 1560
ESFAEVLLRTGKLAEAKNKGEVFPTTEVLLQLASEALPNDMTLALAYLLALPQVLDANRC
Sbjct: 1501 ESFAEVLLRTGKLAEAKNKGEVFPTTEVLLQLASEALPNDMTLALAYLLALPQVLDANRC 1560
Query: 1561 FEKQSPSALSLQLAAYYYSLQIYARLAPCFRDKCHPLYRADPKELIKMVTRHVTRHEHEA 1620
FEKQSPSALSLQLAAYYYSLQIYARLAPCFRDKCHPLYRADPKELIKMVTRHVTRHEHEA
Sbjct: 1561 FEKQSPSALSLQLAAYYYSLQIYARLAPCFRDKCHPLYRADPKELIKMVTRHVTRHEHEA 1620
Query: 1621 WPEDLISLTKQLHCYNERLLDFTQAQILQGLRKGVDVQRFTADDQYKRETILGLAETLEE 1680
WPEDLISLTKQLHCYNERLLDFTQAQILQGLRKGVDVQRFTADDQYKRETILGLAETLEE
Sbjct: 1621 WPEDLISLTKQLHCYNERLLDFTQAQILQGLRKGVDVQRFTADDQYKRETILGLAETLEE 1680
Query: 1681 SVYSIAISLAQRYSVSRWEVFMTHLEFLFTDSGLSTLEIENRAQDLHLFETLKTDPEAFH 1740
SVYSIAISLAQRYSVSRWEVFMTHLEFLFTDSGLSTLEIENRAQDLHLFETLKTDPEAFH
Sbjct: 1681 SVYSIAISLAQRYSVSRWEVFMTHLEFLFTDSGLSTLEIENRAQDLHLFETLKTDPEAFH 1740
Query: 1741 QHMVKYIYPTIGGFDHERLQYYFTLLENCGCADLGNCAIKPETHIRLLKKFKVVASGLNY 1800
QHMVKYIYPTIGGFDHERLQYYFTLLENCGCADLGNCAIKPETHIRLLKKFKVVASGLNY
Sbjct: 1741 QHMVKYIYPTIGGFDHERLQYYFTLLENCGCADLGNCAIKPETHIRLLKKFKVVASGLNY 1800
Query: 1801 KKLTDENMSPLEALEPVLSSQNILSISKLVPKIPEKDGQMLSPSSLYTIWLQKLFWTGDP 1860
KKLTDENMSPLEALEPVLSSQNILSISKLVPKIPEKDGQMLSPSSLYTIWLQKLFWTGDP
Sbjct: 1801 KKLTDENMSPLEALEPVLSSQNILSISKLVPKIPEKDGQMLSPSSLYTIWLQKLFWTGDP 1860
Query: 1861 HLIKQVPGSSPEWLHAYDVCMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRK 1920
HLIKQVPGSSPEWLHAYDVCMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRK
Sbjct: 1861 HLIKQVPGSSPEWLHAYDVCMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRK 1920
Query: 1921 AIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSE 1980
AIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSE
Sbjct: 1921 AIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSE 1980
Query: 1981 QETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGPLDISPKDIVQSA 2040
QETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGPLDISPKDIVQSA
Sbjct: 1981 QETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGPLDISPKDIVQSA 2040
Query: 2041 IMKIISALSGGSADLGGPRDPLKVLEGVVAAVHASVDKGEELVSPEDLLEWLRPFCADDA 2100
IMKIISALSGGSADLGGPRDPLKVLEGVVAAVHASVDKGEELVSPEDLLEWLRPFCADDA
Sbjct: 2041 IMKIISALSGGSADLGGPRDPLKVLEGVVAAVHASVDKGEELVSPEDLLEWLRPFCADDA 2100
Query: 2101 WPVRPRIHVLQILGQSFHLTEEDSKLLVFFRTEAILKASWPQRQVDIADIENEENRYCLF 2160
WPVRPRIHVLQILGQSFHLTEEDSKLLVFFRTEAILKASWPQRQVDIADIENEENRYCLF
Sbjct: 2101 WPVRPRIHVLQILGQSFHLTEEDSKLLVFFRTEAILKASWPQRQVDIADIENEENRYCLF 2160
Query: 2161 MELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKEGLGNEV 2220
MELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKEGLGNEV
Sbjct: 2161 MELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKEGLGNEV 2220
Query: 2221 LKMCRSLYNTKQMLPAEGVKELCLLLLNQSLLLPSLKLLLESRDEHLHEMALEQITAVTT 2280
LKMCRSLYNTKQMLPAEGVKELCLLLLNQSLLLPSLKLLLESRDEHLHEMALEQITAVTT
Sbjct: 2221 LKMCRSLYNTKQMLPAEGVKELCLLLLNQSLLLPSLKLLLESRDEHLHEMALEQITAVTT 2280
Query: 2281 VNDSNCDQELLSLLLDAKLLVKCVSTPFYPRIVDHLLASLQQGRWDAEELGRHLREAGHE 2340
VNDSNCDQELLSLLLDAKLLVKCVSTPFYPRIVDHLLASLQQGRWDAEELGRHLREAGHE
Sbjct: 2281 VNDSNCDQELLSLLLDAKLLVKCVSTPFYPRIVDHLLASLQQGRWDAEELGRHLREAGHE 2340
Query: 2341 AEAGSLLLAVRGTHQAFRTFSTALRAAQHWV 2371
AEAGSLLLAVRGTHQAFRTFSTALRAAQHWV
Sbjct: 2341 AEAGSLLLAVRGTHQAFRTFSTALRAAQHWV 2371
>gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [Homo
sapiens]
Length = 969
Score = 37.4 bits (85), Expect = 0.18
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 1893 ITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYA 1952
+ V+A + + S + +E+ RKA++ ++ ++ ++ EA++ + + T
Sbjct: 376 VQFVEAAAHESEQQKEASWKHNQEL-RKALQQLQEELQNKSQQLRAWEAEKYNEIR-TQE 433
Query: 1953 DTLNHLEKSLAHLETLSHSF--ILSLKNSEQETLQKYSHLYDLSRSEKEKLHDEAVAI 2008
+ HL SL+H E L F +L +++ +TL+ L + R +++HD+AVA+
Sbjct: 434 QNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEANEMLLEKLR---QRIHDKAVAL 488
Score = 33.9 bits (76), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1934 KRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSEQETLQKYSHLYDL 1993
KRN E + E + K D HL+K+ A +E L+ L+ +E Q+ H+Y+L
Sbjct: 46 KRNIELKV-EVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYEL 104
Query: 1994 SRSEKEKLHDEA 2005
++ + L +E+
Sbjct: 105 LENKIQLLQEES 116
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [Homo
sapiens]
Length = 1132
Score = 37.4 bits (85), Expect = 0.18
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 1893 ITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYA 1952
+ V+A + + S + +E+ RKA++ ++ ++ ++ EA++ + + T
Sbjct: 539 VQFVEAAAHESEQQKEASWKHNQEL-RKALQQLQEELQNKSQQLRAWEAEKYNEIR-TQE 596
Query: 1953 DTLNHLEKSLAHLETLSHSF--ILSLKNSEQETLQKYSHLYDLSRSEKEKLHDEAVAI 2008
+ HL SL+H E L F +L +++ +TL+ L + R +++HD+AVA+
Sbjct: 597 QNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEANEMLLEKLR---QRIHDKAVAL 651
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
sapiens]
Length = 2346
Score = 37.4 bits (85), Expect = 0.18
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 1893 ITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYA 1952
+ V+A + + S + +E+ RKA++ ++ ++ ++ EA++ + + T
Sbjct: 376 VQFVEAAAHESEQQKEASWKHNQEL-RKALQQLQEELQNKSQQLRAWEAEKYNEIR-TQE 433
Query: 1953 DTLNHLEKSLAHLETLSHSF--ILSLKNSEQETLQKYSHLYDLSRSEKEKLHDEAVAI 2008
+ HL SL+H E L F +L +++ +TL+ L + R +++HD+AVA+
Sbjct: 434 QNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEANEMLLEKLR---QRIHDKAVAL 488
Score = 33.9 bits (76), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1934 KRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSEQETLQKYSHLYDL 1993
KRN E + E + K D HL+K+ A +E L+ L+ +E Q+ H+Y+L
Sbjct: 46 KRNIELKV-EVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYEL 104
Query: 1994 SRSEKEKLHDEA 2005
++ + L +E+
Sbjct: 105 LENKIQLLQEES 116
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 36.2 bits (82), Expect = 0.39
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 43/194 (22%)
Query: 507 KRPRTITKNYRLVSLRSTTPEELYQRKIESEEYEEALSLAHTYGLDTDLVYQRQWRKSAV 566
++ ++IT+ R + EE Y RK+++E + L L Y + T+ + + + RK+
Sbjct: 319 EKHKSITEALRRQEQNIKSFEETYDRKLKNELLKYQLELKDDYIIRTNRLIEDE-RKNKE 377
Query: 567 NVASIQNYLSKIKKRSWVLHECLERVPENVDAAKELLQYGLKGTDLEALLAIGKGADDGR 626
+Q L I + E + ++V+ KEL
Sbjct: 378 KAVHLQEELIAINSKK-------EELNQSVNRVKEL------------------------ 406
Query: 627 FTLPGEIDIDSISYEELSPPDEEPAKNKKEKELKK----RQELLKLVNFSKLTLEQKELC 682
E++++S+ + L+ + N+K KE+ ++E L+L+ +KL +Q E
Sbjct: 407 -----ELELESVKAQSLAITKQNHMLNEKVKEMSDYSLLKEEKLELLAQNKLLKQQLE-- 459
Query: 683 RCRRKLLTYLDRLA 696
R + L L+RLA
Sbjct: 460 ESRNENLRLLNRLA 473
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 35.8 bits (81), Expect = 0.51
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 1904 KAVTKLSVEAR-KEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVT-YADTLNHLEKS 1961
K + S+E K+ + K++ E R+ + EAKD+K+T + + L+++
Sbjct: 1262 KELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1321
Query: 1962 LAHLETLSHSFILSLKNSEQ--ETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQ 2019
L L L+++ K Q +TLQ + ++ ++ H E +AI
Sbjct: 1322 LNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQHQEVIAI--------YRT 1373
Query: 2020 QLLEVAVGPLDISPKDIVQSAIMKIISALSG 2050
LL A G +D + VQ A+++II G
Sbjct: 1374 HLLSAAQGHMD----EDVQEALLQIIQMRQG 1400
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 35.8 bits (81), Expect = 0.51
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 1904 KAVTKLSVEAR-KEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVT-YADTLNHLEKS 1961
K + S+E K+ + K++ E R+ + EAKD+K+T + + L+++
Sbjct: 1275 KELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1334
Query: 1962 LAHLETLSHSFILSLKNSEQ--ETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQ 2019
L L L+++ K Q +TLQ + ++ ++ H E +AI
Sbjct: 1335 LNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQHQEVIAI--------YRT 1386
Query: 2020 QLLEVAVGPLDISPKDIVQSAIMKIISALSG 2050
LL A G +D + VQ A+++II G
Sbjct: 1387 HLLSAAQGHMD----EDVQEALLQIIQMRQG 1413
>gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo
sapiens]
Length = 2209
Score = 35.0 bits (79), Expect = 0.88
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 27/120 (22%)
Query: 521 LRSTTPEELYQRKIESEEYEEALSLAHTYGLDTDLVY--------------------QRQ 560
L PE R + + EA S A +GLD +LVY Q +
Sbjct: 391 LTEALPENRLSRLLHKHRFAEAESFAIQFGLDVELVYKVKSNHILEKLALSSVDASEQTE 450
Query: 561 WRKSAVNVASIQNYLSKIKKRSWVLHECLERVPENVDAAKELLQYG----LKGTDLEALL 616
W++ V + L KI+ +V++ CL+ + +E+L Y LK D AL+
Sbjct: 451 WQQL---VDDAKENLHKIQDDEFVVNYCLKAQWITYETTQEMLNYAKTRLLKKEDKTALI 507
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 34.7 bits (78), Expect = 1.1
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 314 QGQEQDGIFKMSLSPDGMLLAA--IHFSGKLSIWAIPSLKQQGEWGQNEQP-----GYDD 366
+G+E G F +++ G + A +H +G S + KQ+GEWGQ P G+D
Sbjct: 356 EGKETKGNFNRTVTTGGFFIPATKMHSTGTGS--SCDLTKQEGEWGQEGMPPGAEGGFDV 413
Query: 367 LNPDWRL-STEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGKS 425
+ L + R + + F P+ D +S T + G S+ K++ S
Sbjct: 414 SSDRSHLQGAQARPPPEQLKVFRPVED----PESEQTAPKMLGMFYTSNDSPSKSVFTSS 469
Query: 426 CEWFEPSPQ 434
EPSP+
Sbjct: 470 LFQMEPSPR 478
>gi|55956890 kelch/ankyrin repeat containing cyclin A1 interacting
protein isoform b [Homo sapiens]
Length = 288
Score = 34.7 bits (78), Expect = 1.1
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 227 HCFSFSSHYPHGINTAIYHPGHRLLLVGGCETAE 260
H S S H + T HPGH+LLL GGC AE
Sbjct: 183 HTASRSGHCAALLQTPGPHPGHQLLLFGGCNLAE 216
>gi|55956888 kelch/ankyrin repeat containing cyclin A1 interacting
protein isoform a [Homo sapiens]
Length = 349
Score = 34.7 bits (78), Expect = 1.1
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 227 HCFSFSSHYPHGINTAIYHPGHRLLLVGGCETAE 260
H S S H + T HPGH+LLL GGC AE
Sbjct: 183 HTASRSGHCAALLQTPGPHPGHQLLLFGGCNLAE 216
>gi|169217489 PREDICTED: similar to phosphodiesterase 4D interacting
protein [Homo sapiens]
Length = 211
Score = 34.3 bits (77), Expect = 1.5
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 1916 EMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSF--I 1973
E RKA++ ++ ++ ++ EA++ + + T + HL SL+H E L F +
Sbjct: 2 EELRKALQQLQEELQNKSQQLRAWEAEKYNEIR-TQEQNIQHLNHSLSHKEQLLQEFREL 60
Query: 1974 LSLKNSEQETLQKYSHLYDLSRSEKEKLHDEAVAI 2008
L +++ +TL+ L + R +++ D+AVA+
Sbjct: 61 LQYRDNSDKTLEANEMLLEKLR---QRIRDKAVAL 92
>gi|50658077 phosphodiesterase 4D interacting protein isoform 4 [Homo
sapiens]
Length = 173
Score = 33.9 bits (76), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1934 KRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSEQETLQKYSHLYDL 1993
KRN E + E + K D HL+K+ A +E L+ L+ +E Q+ H+Y+L
Sbjct: 46 KRNIELKV-EVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYEL 104
Query: 1994 SRSEKEKLHDEA 2005
++ + L +E+
Sbjct: 105 LENKIQLLQEES 116
>gi|50658075 phosphodiesterase 4D interacting protein isoform 3 [Homo
sapiens]
Length = 310
Score = 33.9 bits (76), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1934 KRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSEQETLQKYSHLYDL 1993
KRN E + E + K D HL+K+ A +E L+ L+ +E Q+ H+Y+L
Sbjct: 183 KRNIELKV-EVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYEL 241
Query: 1994 SRSEKEKLHDEA 2005
++ + L +E+
Sbjct: 242 LENKIQLLQEES 253
>gi|195976782 Paf1/RNA polymerase II complex component [Homo sapiens]
Length = 710
Score = 33.9 bits (76), Expect = 2.0
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 1906 VTKLSVEARKEMTRKAIKTVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHL 1965
+ K V R+ +K +KT K +K +K+ E+E ++ K +++ + +H ++
Sbjct: 212 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKER---- 267
Query: 1966 ETLSHSFILSLKNSEQETLQKYSHLYDLSRSEKEKLHDEAVAICLDGQPL 2015
++ E L K S + ++E+EK + + QPL
Sbjct: 268 -----------RSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPL 306
>gi|34222391 zinc finger protein 605 [Homo sapiens]
Length = 641
Score = 33.9 bits (76), Expect = 2.0
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 1053 HGLEKPISFVKNTQSSSEEARKLMVRLTRHTGRKQPPVSESHWRTLLQDMLTMQQNVYT- 1111
H +EKP S + ++ S++ KL+ HTG K P S + L Q +T
Sbjct: 275 HTIEKPYSCSECGKAFSQKL-KLITHQRAHTGEKPYPCSHCGKAFFWKSQLITHQRTHTG 333
Query: 1112 --CLDSDACYEIFTESLLCSSRLENIHLAGQMMHCSACSE---NPPA----GIAHKGKPH 1162
C + F+ + L R + IH + C+ C E P I H G+ +
Sbjct: 334 KKPYGCGECQKAFSRNSLL-IRHQRIHTGEKPYECNECGEAFIRKPQLIKHQITHTGEKN 392
Query: 1163 YRVS 1166
YR S
Sbjct: 393 YRCS 396
>gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens]
Length = 1066
Score = 33.5 bits (75), Expect = 2.6
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 292 GVTAVPKTLGLLRMLSVKFYSRQGQEQDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLK 351
GV + + + M + K G +GI ++SP G +A+I +G L+I+++ +L
Sbjct: 280 GVLSQDGIMRFINMQTCKLLFEIGSLDEGISSSAISPHGRYIASIMENGSLNIYSVQALT 339
Query: 352 QQ 353
Q+
Sbjct: 340 QE 341
>gi|223005857 WD repeat domain 67 isoform 2 [Homo sapiens]
Length = 970
Score = 33.5 bits (75), Expect = 2.6
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 292 GVTAVPKTLGLLRMLSVKFYSRQGQEQDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLK 351
GV + + + M + K G +GI ++SP G +A+I +G L+I+++ +L
Sbjct: 280 GVLSQDGIMRFINMQTCKLLFEIGSLDEGISSSAISPHGRYIASIMENGSLNIYSVQALT 339
Query: 352 QQ 353
Q+
Sbjct: 340 QE 341
>gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
[Homo sapiens]
Length = 621
Score = 33.5 bits (75), Expect = 2.6
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 14/246 (5%)
Query: 1812 EALEPVLSSQNILSISKLVPKIPEKDGQMLSPSSLYTIWLQKLFWTGDPHLIKQVPGSSP 1871
E PV + S K VPK+ + + Y+ W W +L ++ +
Sbjct: 180 EVFTPVFERNSRWSNKKNVPKLGDMNSSFEDVDIFYSFWYNFDSWREFSYLDEEEKEKAE 239
Query: 1872 -----EWLHAYDVCMKYFDRLHPGDLI-TVVDAVTFSPKAVTKLSVE--ARKEMTRKAIK 1923
W+ + + + + I T+VD + K E A+KE +KA
Sbjct: 240 CRDERRWIEKQNRATRAQRKKEEMNRIRTLVDNAYSCDPRIKKFKEEEKAKKEAEKKAKA 299
Query: 1924 TVKHFIEKPRKRNSEDEAQEAKDSKVTYADTLNHLEKSLAHLETLSHSFILSLKNSEQET 1983
K ++ +++ + E + A+ +K + + + + I + + +
Sbjct: 300 EAKRKEQEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKAIKKERQKLRNS 359
Query: 1984 LQKYSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGPLDISPKDIVQSAIMK 2043
+ ++H D + +E+ K+ +E +C D LA +Q L E L K++ ++A+ K
Sbjct: 360 CKTWNHFSD-NEAERVKMMEEVEKLC-DRLELASLQCLNET----LTSCTKEVGKAALEK 413
Query: 2044 IISALS 2049
I ++
Sbjct: 414 QIEEIN 419
>gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo
sapiens]
Length = 1429
Score = 32.7 bits (73), Expect = 4.4
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 2155 NRYCLFMELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKE 2214
+R+ ++L+E H + + +++L W P+ Y W L +V+ ++ +
Sbjct: 761 SRHVKKLQLIEGRQHRSTWSPTMVVLFRWVPVTDAY------WQILFSVLKVTRNLKELD 814
Query: 2215 GLGNE-----VLKMCRSLYNTKQM----------LPAEGVKELCL-LLLNQSL--LLPSL 2256
GN V +C++L + + L AE K+L L NQ+L L S
Sbjct: 815 LSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSF 874
Query: 2257 KLLLESRDEHLHE------MALEQITAVTTVNDSNCDQELLSLL 2294
+L ++ +HL + L+++ V+ S+C Q+L S+L
Sbjct: 875 NVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVL 918
>gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Homo
sapiens]
Length = 1399
Score = 32.7 bits (73), Expect = 4.4
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 2155 NRYCLFMELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKE 2214
+R+ ++L+E H + + +++L W P+ Y W L +V+ ++ +
Sbjct: 761 SRHVKKLQLIEGRQHRSTWSPTMVVLFRWVPVTDAY------WQILFSVLKVTRNLKELD 814
Query: 2215 GLGNE-----VLKMCRSLYNTKQM----------LPAEGVKELCL-LLLNQSL--LLPSL 2256
GN V +C++L + + L AE K+L L NQ+L L S
Sbjct: 815 LSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSF 874
Query: 2257 KLLLESRDEHLHE------MALEQITAVTTVNDSNCDQELLSLL 2294
+L ++ +HL + L+++ V+ S+C Q+L S+L
Sbjct: 875 NVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVL 918
>gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Homo
sapiens]
Length = 1375
Score = 32.7 bits (73), Expect = 4.4
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 2155 NRYCLFMELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKE 2214
+R+ ++L+E H + + +++L W P+ Y W L +V+ ++ +
Sbjct: 761 SRHVKKLQLIEGRQHRSTWSPTMVVLFRWVPVTDAY------WQILFSVLKVTRNLKELD 814
Query: 2215 GLGNE-----VLKMCRSLYNTKQM----------LPAEGVKELCL-LLLNQSL--LLPSL 2256
GN V +C++L + + L AE K+L L NQ+L L S
Sbjct: 815 LSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSF 874
Query: 2257 KLLLESRDEHLHE------MALEQITAVTTVNDSNCDQELLSLL 2294
+L ++ +HL + L+++ V+ S+C Q+L S+L
Sbjct: 875 NVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVL 918
>gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Homo
sapiens]
Length = 1443
Score = 32.7 bits (73), Expect = 4.4
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 2155 NRYCLFMELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKE 2214
+R+ ++L+E H + + +++L W P+ Y W L +V+ ++ +
Sbjct: 761 SRHVKKLQLIEGRQHRSTWSPTMVVLFRWVPVTDAY------WQILFSVLKVTRNLKELD 814
Query: 2215 GLGNE-----VLKMCRSLYNTKQM----------LPAEGVKELCL-LLLNQSL--LLPSL 2256
GN V +C++L + + L AE K+L L NQ+L L S
Sbjct: 815 LSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSF 874
Query: 2257 KLLLESRDEHLHE------MALEQITAVTTVNDSNCDQELLSLL 2294
+L ++ +HL + L+++ V+ S+C Q+L S+L
Sbjct: 875 NVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVL 918
>gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Homo
sapiens]
Length = 1473
Score = 32.7 bits (73), Expect = 4.4
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 2155 NRYCLFMELLESSHHEAEFQHLVLLLQAWPPMKSEYVITNNPWVRLATVMLTRCTMENKE 2214
+R+ ++L+E H + + +++L W P+ Y W L +V+ ++ +
Sbjct: 761 SRHVKKLQLIEGRQHRSTWSPTMVVLFRWVPVTDAY------WQILFSVLKVTRNLKELD 814
Query: 2215 GLGNE-----VLKMCRSLYNTKQM----------LPAEGVKELCL-LLLNQSL--LLPSL 2256
GN V +C++L + + L AE K+L L NQ+L L S
Sbjct: 815 LSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSF 874
Query: 2257 KLLLESRDEHLHE------MALEQITAVTTVNDSNCDQELLSLL 2294
+L ++ +HL + L+++ V+ S+C Q+L S+L
Sbjct: 875 NVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVL 918
>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
[Homo sapiens]
Length = 2044
Score = 32.7 bits (73), Expect = 4.4
Identities = 61/239 (25%), Positives = 89/239 (37%), Gaps = 53/239 (22%)
Query: 1826 ISKLVPKIPE-----------------KDGQMLSPSSLYTIWLQKLFW--TGDPHLIKQV 1866
+SKL PKIP D + + PS+L T+ + T I QV
Sbjct: 147 LSKLFPKIPPHSLRVLEELEGVRRRSFNDFRSILPSNLLTVCQEGTLKRKTSSVSSISQV 206
Query: 1867 -------PGSSP--EWLHAYDV-CMKYFDRLHPGDLI-TVVDAVTFSP--KAVTKLSVEA 1913
P SSP H ++ C+ L P T+ + + SP VT
Sbjct: 207 SPERGMPPPSSPGGSAFHYFEASCLPDGTALEPEYYFSTISSSFSVSPLFNGVTYKEFNI 266
Query: 1914 RKEMTRKAIKTVKHFIEKPRKRN------SEDEAQEAKDSKVT------YADTLNHLEKS 1961
EM R+ + VK +E+ ++ S EA + D T Y L +
Sbjct: 267 PLEMLRELLNLVKKIVEEAVLKSLDAIVASVMEANPSADLYYTSFSDPLYLTMFKMLRDT 326
Query: 1962 LAHLETLS-------HSFILSLKNSEQETLQKYSHLYDLSRSEKE--KLHDEAVAICLD 2011
L +++ L H F+L N+ Q LQK H D +E KL +A A C+D
Sbjct: 327 LYYMKDLPTSFVKEIHDFVLEQFNTSQGELQKILHDADRIHNELSPLKLRCQANAACVD 385
>gi|199559532 Abelson helper integration site 1 isoform b [Homo
sapiens]
Length = 1053
Score = 32.7 bits (73), Expect = 4.4
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 365 DDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGK 424
D L D +LS+EKRKK K+ F S +T++ + +++++
Sbjct: 222 DTLFHDDKLSSEKRKKKKEVPVFSKA------ETSTLTISGDTVEGEQKKESSVRSVSSD 275
Query: 425 SCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEISAK 482
S + E S +T D S++ + K PK+++ +T+A ++ + D D +EI+++
Sbjct: 276 SHQDDEISSMEQSTED----SMQDDTKPKPKKTKKKTKAVADNNEDVDGDGVHEITSR 329
>gi|199559490 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 32.7 bits (73), Expect = 4.4
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 365 DDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGK 424
D L D +LS+EKRKK K+ F S +T++ + +++++
Sbjct: 222 DTLFHDDKLSSEKRKKKKEVPVFSKA------ETSTLTISGDTVEGEQKKESSVRSVSSD 275
Query: 425 SCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEISAK 482
S + E S +T D S++ + K PK+++ +T+A ++ + D D +EI+++
Sbjct: 276 SHQDDEISSMEQSTED----SMQDDTKPKPKKTKKKTKAVADNNEDVDGDGVHEITSR 329
>gi|199559438 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 32.7 bits (73), Expect = 4.4
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 365 DDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGK 424
D L D +LS+EKRKK K+ F S +T++ + +++++
Sbjct: 222 DTLFHDDKLSSEKRKKKKEVPVFSKA------ETSTLTISGDTVEGEQKKESSVRSVSSD 275
Query: 425 SCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEISAK 482
S + E S +T D S++ + K PK+++ +T+A ++ + D D +EI+++
Sbjct: 276 SHQDDEISSMEQSTED----SMQDDTKPKPKKTKKKTKAVADNNEDVDGDGVHEITSR 329
>gi|31542701 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 32.7 bits (73), Expect = 4.4
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 365 DDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGK 424
D L D +LS+EKRKK K+ F S +T++ + +++++
Sbjct: 222 DTLFHDDKLSSEKRKKKKEVPVFSKA------ETSTLTISGDTVEGEQKKESSVRSVSSD 275
Query: 425 SCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEISAK 482
S + E S +T D S++ + K PK+++ +T+A ++ + D D +EI+++
Sbjct: 276 SHQDDEISSMEQSTED----SMQDDTKPKPKKTKKKTKAVADNNEDVDGDGVHEITSR 329
>gi|24308069 zinc finger protein 521 [Homo sapiens]
Length = 1311
Score = 32.7 bits (73), Expect = 4.4
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 16/91 (17%)
Query: 1062 VKNTQSSS--EEARKLMVRLTRHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDSDACY 1119
+K+TQ S EE L +H P S + R LQ + C+
Sbjct: 242 MKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAALQCVY--------------CH 287
Query: 1120 EIFTESLLCSSRLENIHLAGQMMHCSACSEN 1150
E+F E + +E +H + CS CSE+
Sbjct: 288 ELFVEETSLMNHMEQVHSGEKKNSCSICSES 318
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,671,769
Number of Sequences: 37866
Number of extensions: 4130910
Number of successful extensions: 12566
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 12478
Number of HSP's gapped (non-prelim): 136
length of query: 2371
length of database: 18,247,518
effective HSP length: 119
effective length of query: 2252
effective length of database: 13,741,464
effective search space: 30945776928
effective search space used: 30945776928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.