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Search of human proteins with 40353764
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40353764 bisphosphoglycerate mutase [Homo sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502445 bisphosphoglycerate mutase [Homo sapiens] 531 e-151
gi|40353764 bisphosphoglycerate mutase [Homo sapiens] 531 e-151
gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens] 304 4e-83
gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens] 295 3e-80
gi|71274132 bisphosphoglycerate mutase 4 [Homo sapiens] 292 2e-79
gi|9966849 TP53-induced glycolysis and apoptosis regulator [Homo... 41 0.001
gi|24497612 ubiquitin associated and SH3 domain containing, B [H... 36 0.029
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 30 2.1
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 30 2.1
gi|7019507 purine-rich element binding protein G isoform A [Homo... 30 2.1
gi|62865862 purine-rich element binding protein G isoform B [Hom... 30 2.1
gi|94536776 zinc finger, CW type with PWWP domain 2 [Homo sapiens] 30 2.7
gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] 29 4.7
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 29 4.7
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 29 4.7
gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] 29 4.7
gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens] 29 4.7
>gi|4502445 bisphosphoglycerate mutase [Homo sapiens]
Length = 259
Score = 531 bits (1367), Expect = e-151
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
Query: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN
Sbjct: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
Query: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG
Sbjct: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
Query: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA
Sbjct: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
Query: 241 IQAAIKKVEDQGKVKQAKK 259
IQAAIKKVEDQGKVKQAKK
Sbjct: 241 IQAAIKKVEDQGKVKQAKK 259
>gi|40353764 bisphosphoglycerate mutase [Homo sapiens]
Length = 259
Score = 531 bits (1367), Expect = e-151
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
Query: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN
Sbjct: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
Query: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG
Sbjct: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
Query: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA
Sbjct: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
Query: 241 IQAAIKKVEDQGKVKQAKK 259
IQAAIKKVEDQGKVKQAKK
Sbjct: 241 IQAAIKKVEDQGKVKQAKK 259
>gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens]
Length = 254
Score = 304 bits (779), Expect = 4e-83
Identities = 137/256 (53%), Positives = 184/256 (71%), Gaps = 2/256 (0%)
Query: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
M+ YKL+++RHGE AWN ENRF W D L+ G EEA+ G+ L+ +EFD+ FTSV
Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQ 60
Query: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
R+I T W +L+ + Q W+PV +WRLNERHYG L GLN+ + A HGE QV++WRRSY+
Sbjct: 61 KRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD 120
Query: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
V PPP+E HP+Y I DRRY D+ DQLP ESLKD + R LP+WNE I P++ G
Sbjct: 121 VPPPPMEPDHPFYSNISKDRRY--ADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEG 178
Query: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
K +LI+AHGNS R ++KHLEG+S+E I+ + LPTG+PI+ ELD+NL+ + P QFLGD+E
Sbjct: 179 KRVLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEET 238
Query: 241 IQAAIKKVEDQGKVKQ 256
++ A++ V QGK K+
Sbjct: 239 VRKAMEAVAAQGKAKK 254
>gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens]
Length = 253
Score = 295 bits (755), Expect = 3e-80
Identities = 131/255 (51%), Positives = 182/255 (71%), Gaps = 2/255 (0%)
Query: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
M+ ++L+M+RHGE WN+ENRFC W D +L+ +G EEA+ K +K EFD+ +TSVL
Sbjct: 1 MATHRLVMVRHGESTWNQENRFCGWFDAELSEKGTEEAKRGAKAIKDAKMEFDICYTSVL 60
Query: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
R+I T W IL+ Q W+PV +WRLNERHYG L GLN+ + A HGEEQV++WRRS++
Sbjct: 61 KRAIRTLWAILDGTDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEEQVKIWRRSFD 120
Query: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
+ PPP++E HPYY I +RRY + +LP ESLKD + R LP+WNE I P++ G
Sbjct: 121 IPPPPMDEKHPYYNSISKERRY--AGLKPGELPTCESLKDTIARALPFWNEEIVPQIKAG 178
Query: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
K +LI+AHGNS R ++KHLEG+SD+ I+ + LPTG+PI+ EL++ L+ P QFLGD+E
Sbjct: 179 KRVLIAAHGNSLRGIVKHLEGMSDQAIMELNLPTGIPIVYELNKELKPTKPMQFLGDEET 238
Query: 241 IQAAIKKVEDQGKVK 255
++ A++ V QGK K
Sbjct: 239 VRKAMEAVAAQGKAK 253
>gi|71274132 bisphosphoglycerate mutase 4 [Homo sapiens]
Length = 254
Score = 292 bits (747), Expect = 2e-79
Identities = 133/256 (51%), Positives = 178/256 (69%), Gaps = 2/256 (0%)
Query: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
M+ YKL+++RHGE WN ENRF W D L+ G EEA+ G+ L+ +EFD+ TSV
Sbjct: 1 MAAYKLVLIRHGESTWNLENRFSCWYDADLSPAGHEEAKRGGQALRDAGYEFDICLTSVQ 60
Query: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
R I T W +L+ + Q W+PV +WRLNERHYG L GLN+ + A HGE QV++WRRSY+
Sbjct: 61 KRVIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD 120
Query: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
V PPP+E HP+Y I DRRY D+ DQLP ES KD + R LP+WNE I P++ G
Sbjct: 121 VPPPPMEPDHPFYSNISKDRRY--ADLTEDQLPSYESPKDTIARALPFWNEEIVPQIKEG 178
Query: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEA 240
K +LI+AHGNS + + KH+EG+S+E I+ + LPTG+PI+ ELD+NL+ + P QFLGD+E
Sbjct: 179 KRVLIAAHGNSLQGIAKHVEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEET 238
Query: 241 IQAAIKKVEDQGKVKQ 256
+ AI+ V QGK K+
Sbjct: 239 VCKAIEAVAAQGKAKK 254
>gi|9966849 TP53-induced glycolysis and apoptosis regulator [Homo
sapiens]
Length = 270
Score = 41.2 bits (95), Expect = 0.001
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 1 MSKYKLIMLRHGEGAWNKENRF-CSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV 59
M+++ L ++RHGE +NKE VD+ L+ G ++A G L N +F F+S
Sbjct: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD 58
Query: 60 LNRSIHTAWLILEELG-QEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRS 118
L R+ T ILE + + V+ RL ER YG + E AL+ + R
Sbjct: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVV-----EGKALSELRAMAKAAREE 113
Query: 119 YNVTPPP 125
V PP
Sbjct: 114 CPVFTPP 120
>gi|24497612 ubiquitin associated and SH3 domain containing, B [Homo
sapiens]
Length = 649
Score = 36.2 bits (82), Expect = 0.029
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 23/180 (12%)
Query: 27 DQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWR 86
D + G +AR G+ L N D V+ S R + TA IL+ L QE
Sbjct: 438 DAPITVFGCMQARLVGEALLESNTIIDHVYCSPSLRCVQTAHNILKGLQQE--------- 488
Query: 87 LNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCD 146
N ++ + G + W + P I S + D Y+
Sbjct: 489 ------------NHLKIRVEPGLFEWTKWVAG-STLPAWIPPSELAAANLSVDTTYRP-H 534
Query: 147 VPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDED 206
+P+ +L SES + R E I+ +G ILI AH +S A L+G+S ++
Sbjct: 535 IPISKLVVSESYDTYISRSFQVTKEIISECKSKGNNILIVAHASSLEACTCQLQGLSPQN 594
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 30.0 bits (66), Expect = 2.1
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 27 DQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQE 77
D L+S G+ ++R G L VF S R + TA LILEEL E
Sbjct: 412 DPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLE 462
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 30.0 bits (66), Expect = 2.1
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 27 DQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQE 77
D L+S G+ ++R G L VF S R + TA LILEEL E
Sbjct: 450 DPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLE 500
>gi|7019507 purine-rich element binding protein G isoform A [Homo
sapiens]
Length = 347
Score = 30.0 bits (66), Expect = 2.1
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 91 HYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPI---EESHPY----YQEIYNDRRYK 143
HY A +GL + H +EQ R+ ++ PP+ E HP+ I D R
Sbjct: 125 HY-AHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKY 183
Query: 144 VCDVPLDQLPRSESLKDVLER---LLPYWNERIAPEVLRGKTILISAHG--NSSRALLKH 198
D+ +Q R ++ + R ++ Y+ + E +TI++ A G AL++
Sbjct: 184 YLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQE----QTIVLPAQGMIEFRDALVQL 239
Query: 199 LEGISDEDI 207
+E + DI
Sbjct: 240 IEDYGEGDI 248
>gi|62865862 purine-rich element binding protein G isoform B [Homo
sapiens]
Length = 322
Score = 30.0 bits (66), Expect = 2.1
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 91 HYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPI---EESHPY----YQEIYNDRRYK 143
HY A +GL + H +EQ R+ ++ PP+ E HP+ I D R
Sbjct: 125 HY-AHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKY 183
Query: 144 VCDVPLDQLPRSESLKDVLER---LLPYWNERIAPEVLRGKTILISAHG--NSSRALLKH 198
D+ +Q R ++ + R ++ Y+ + E +TI++ A G AL++
Sbjct: 184 YLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQE----QTIVLPAQGMIEFRDALVQL 239
Query: 199 LEGISDEDI 207
+E + DI
Sbjct: 240 IEDYGEGDI 248
>gi|94536776 zinc finger, CW type with PWWP domain 2 [Homo sapiens]
Length = 356
Score = 29.6 bits (65), Expect = 2.7
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 20/107 (18%)
Query: 115 WRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKD-------------- 160
WR + ++ P+Y + D RY C + + P L
Sbjct: 41 WRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEEDFPEESQLHQCGFKIVYSQLPLGS 100
Query: 161 -VLERL--LPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISD 204
VL +L P W + P+ +GK + GN H+E + D
Sbjct: 101 LVLVKLQNWPSWPGILCPDRFKGKYVTYDPDGNVEE---YHIEFLGD 144
>gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 28.9 bits (63), Expect = 4.7
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 30 LNSEGMEEARNCG-KQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLN 88
L + ++++RN G K + + ++D + +V N W L ++ V E++
Sbjct: 75 LLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA---- 130
Query: 89 ERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVP 148
YG IG +R + N G+E++ R T P Y I D+ Y +
Sbjct: 131 ---YGQFIGPHRIKATNNKGKEKIYSAERFLIAT-----GERPRYLGIPGDKEYCISSDD 182
Query: 149 LDQLP 153
L LP
Sbjct: 183 LFSLP 187
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 28.9 bits (63), Expect = 4.7
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 30 LNSEGMEEARNCG-KQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLN 88
L + ++++RN G K + + ++D + +V N W L ++ V E++
Sbjct: 225 LLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA---- 280
Query: 89 ERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVP 148
YG IG +R + N G+E++ R T P Y I D+ Y +
Sbjct: 281 ---YGQFIGPHRIKATNNKGKEKIYSAERFLIAT-----GERPRYLGIPGDKEYCISSDD 332
Query: 149 LDQLP 153
L LP
Sbjct: 333 LFSLP 337
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 28.9 bits (63), Expect = 4.7
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 30 LNSEGMEEARNCG-KQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLN 88
L + ++++RN G K + + ++D + +V N W L ++ V E++
Sbjct: 127 LLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA---- 182
Query: 89 ERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVP 148
YG IG +R + N G+E++ R T P Y I D+ Y +
Sbjct: 183 ---YGQFIGPHRIKATNNKGKEKIYSAERFLIAT-----GERPRYLGIPGDKEYCISSDD 234
Query: 149 LDQLP 153
L LP
Sbjct: 235 LFSLP 239
>gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 28.9 bits (63), Expect = 4.7
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 30 LNSEGMEEARNCG-KQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLN 88
L + ++++RN G K + + ++D + +V N W L ++ V E++
Sbjct: 75 LLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA---- 130
Query: 89 ERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVP 148
YG IG +R + N G+E++ R T P Y I D+ Y +
Sbjct: 131 ---YGQFIGPHRIKATNNKGKEKIYSAERFLIAT-----GERPRYLGIPGDKEYCISSDD 182
Query: 149 LDQLP 153
L LP
Sbjct: 183 LFSLP 187
>gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 28.9 bits (63), Expect = 4.7
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 30 LNSEGMEEARNCG-KQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLN 88
L + ++++RN G K + + ++D + +V N W L ++ V E++
Sbjct: 75 LLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA---- 130
Query: 89 ERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVP 148
YG IG +R + N G+E++ R T P Y I D+ Y +
Sbjct: 131 ---YGQFIGPHRIKATNNKGKEKIYSAERFLIAT-----GERPRYLGIPGDKEYCISSDD 182
Query: 149 LDQLP 153
L LP
Sbjct: 183 LFSLP 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,449,689
Number of Sequences: 37866
Number of extensions: 463209
Number of successful extensions: 1038
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1027
Number of HSP's gapped (non-prelim): 17
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.