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Search of human proteins with 39812181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39812181 N-acetylglucosaminyltranferase VB isoform 1 [Homo
sapiens]
(790 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39812181 N-acetylglucosaminyltranferase VB isoform 1 [Homo sa... 1645 0.0
gi|39812197 N-acetylglucosaminyltranferase VB isoform 2 [Homo sa... 1603 0.0
gi|4505167 N-acetylglucosaminyltransferase V [Homo sapiens] 624 e-179
gi|5032243 makorin ring finger protein 3 [Homo sapiens] 32 2.3
gi|134031945 SCO-spondin [Homo sapiens] 32 3.0
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 31 3.9
gi|62739181 rhotekin isoform c [Homo sapiens] 30 6.7
gi|62739179 rhotekin isoform a [Homo sapiens] 30 6.7
gi|19526471 rhotekin isoform b [Homo sapiens] 30 6.7
gi|38570109 CAP-binding protein complex interacting protein 1 is... 30 6.7
gi|38570107 CAP-binding protein complex interacting protein 1 is... 30 6.7
gi|27886566 mucosa associated lymphoid tissue lymphoma transloca... 30 8.7
gi|5803078 mucosa associated lymphoid tissue lymphoma translocat... 30 8.7
gi|44889963 CD163 antigen isoform b [Homo sapiens] 30 8.7
gi|44662834 CD163 antigen isoform a [Homo sapiens] 30 8.7
gi|28416923 purinergic receptor P2X2 isoform B [Homo sapiens] 30 8.7
gi|28416921 purinergic receptor P2X2 isoform H [Homo sapiens] 30 8.7
gi|27881423 purinergic receptor P2X2 isoform I [Homo sapiens] 30 8.7
gi|25092733 purinergic receptor P2X2 isoform D [Homo sapiens] 30 8.7
gi|25092719 purinergic receptor P2X2 isoform A [Homo sapiens] 30 8.7
gi|7706629 purinergic receptor P2X2 isoform C [Homo sapiens] 30 8.7
gi|18959210 WIRE protein [Homo sapiens] 30 8.7
>gi|39812181 N-acetylglucosaminyltranferase VB isoform 1 [Homo
sapiens]
Length = 790
Score = 1645 bits (4261), Expect = 0.0
Identities = 790/790 (100%), Positives = 790/790 (100%)
Query: 1 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE 60
MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
Sbjct: 1 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE 60
Query: 61 VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER 120
VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
Sbjct: 61 VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER 120
Query: 121 IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT 180
IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
Sbjct: 121 IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT 180
Query: 181 SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL 240
SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL
Sbjct: 181 SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL 240
Query: 241 LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV 300
LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV
Sbjct: 241 LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV 300
Query: 301 FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP 360
FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP
Sbjct: 301 FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP 360
Query: 361 FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN 420
FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
Sbjct: 361 FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN 420
Query: 421 LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFL 480
LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFL
Sbjct: 421 LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFL 480
Query: 481 GILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAP 540
GILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAP
Sbjct: 481 GILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAP 540
Query: 541 LEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNS 600
LEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNS
Sbjct: 541 LEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNS 600
Query: 601 EEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFV 660
EEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFV
Sbjct: 601 EEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFV 660
Query: 661 LAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQ 720
LAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQ
Sbjct: 661 LAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQ 720
Query: 721 DAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRK 780
DAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRK
Sbjct: 721 DAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRK 780
Query: 781 GQVALCQGCL 790
GQVALCQGCL
Sbjct: 781 GQVALCQGCL 790
>gi|39812197 N-acetylglucosaminyltranferase VB isoform 2 [Homo
sapiens]
Length = 801
Score = 1603 bits (4150), Expect = 0.0
Identities = 773/788 (98%), Positives = 775/788 (98%), Gaps = 1/788 (0%)
Query: 4 VNPDGKIMVRRCLVTLRPFR-LFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTEVM 62
V G + + L L P R LFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTEVM
Sbjct: 14 VERQGTMALPALLTRLLPLRRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTEVM 73
Query: 63 GGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMERIQ 122
GGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMERIQ
Sbjct: 74 GGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMERIQ 133
Query: 123 AIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWTSD 182
AIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWTSD
Sbjct: 134 AIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWTSD 193
Query: 183 PCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHLLD 242
PCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHLLD
Sbjct: 194 PCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHLLD 253
Query: 243 LMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDVFS 302
LMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDVFS
Sbjct: 254 LMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDVFS 313
Query: 303 PRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLPFD 362
PRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLPFD
Sbjct: 314 PRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLPFD 373
Query: 363 LIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWNLN 422
LIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWNLN
Sbjct: 374 LIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWNLN 433
Query: 423 PKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFLGI 482
PKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFLGI
Sbjct: 434 PKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFLGI 493
Query: 483 LNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAPLE 542
LNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAPLE
Sbjct: 494 LNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAPLE 553
Query: 543 AIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNSEE 602
AIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNSEE
Sbjct: 554 AIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNSEE 613
Query: 603 FEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFVLA 662
FEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFVLA
Sbjct: 614 FEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFVLA 673
Query: 663 PNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQDA 722
PNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQDA
Sbjct: 674 PNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQDA 733
Query: 723 FLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRKGQ 782
FLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRKGQ
Sbjct: 734 FLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRKGQ 793
Query: 783 VALCQGCL 790
VALCQGCL
Sbjct: 794 VALCQGCL 801
>gi|4505167 N-acetylglucosaminyltransferase V [Homo sapiens]
Length = 741
Score = 624 bits (1610), Expect = e-179
Identities = 333/757 (43%), Positives = 458/757 (60%), Gaps = 68/757 (8%)
Query: 55 FTIRTEVMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPG 114
FTI+ PES +LR+ +L+L + + ALA EN + + + D
Sbjct: 32 FTIQQRTQ--PESSSMLREQ--ILDLSKRYIKALAE-ENRNVVDGPYAGVMTAYDLKKTL 86
Query: 115 AGLMERIQAIAQNVSDIAVKVDQILRH--------------SLLLHSKVS-----EGRRD 155
A L++ I Q + + KVD ++ + SL+ K++ G ++
Sbjct: 87 AVLLDNI---LQRIGKLESKVDNLVVNGTGTNSTNSTTAVPSLVALEKINVADIINGAQE 143
Query: 156 QCEAPSDPKFPDCSGKVEWMRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRN 215
+C P +P C GK++WM+ W SDPCYA +GVDG+ CSF IYLSEVE +CP LPWR
Sbjct: 144 KCVLPPMDGYPHCEGKIKWMKDMWRSDPCYADYGVDGSTCSFFIYLSEVENWCPHLPWRA 203
Query: 216 QTAAQRAPKPLPKVQAVFRSNLSHLLDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQK 275
+ + A A R++ + L +M +E +M+ R +R+ W A + LA+K
Sbjct: 204 KNPYEEADH---NSLAEIRTDFNILYSMMKKHEE-FRWMRLRIRRMADAWIQAIKSLAEK 259
Query: 276 LGATQRDQKQILVHIGFLTEESGDVFSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTV 335
+R +K++LVH+G LT+ESG + GGPLGE+VQW+D++T+LY+LGH +R++
Sbjct: 260 QNLEKRKRKKVLVHLGLLTKESGFKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISA 319
Query: 336 SLKELQSNLGVPPG-RGSCPLTMPLPFDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDT 394
SL EL+ + G R CP +LIY D GL Q K+ +G S+ Y+C +RV+D+
Sbjct: 320 SLAELKEIMKKVVGNRSGCPTVGDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDS 379
Query: 395 FGTEPAYNHEEYATLHGYRTNWGYWNLNPKQFMTMFPHTPDNSFMGFVSEE-LNETEKRL 453
FGTEP +NH YA G++T WG WNLNP+QF TMFPHTPDNSF+GFV E+ LN ++
Sbjct: 380 FGTEPEFNHANYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHH 439
Query: 454 IKGGKASNMAVVYGKEASIWKGKEKFLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLL 513
I K N ++VYGK S WK K+ +L I++ YME+H TVY S + +P++VKNHG+L
Sbjct: 440 INEIKRQNQSLVYGKVDSFWKNKKIYLDIIHTYMEVHATVYGSSTK--NIPSYVKNHGIL 497
Query: 514 PQPEFQQLLRKAKLFIGFGFPYEGPAPLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTS 573
+ Q LLR+ KLF+G GFPYEGPAPLEAIANGC FL +F+PP SS N +FF GKPT
Sbjct: 498 SGRDLQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTL 557
Query: 574 REVFSQHPYAENFIGKPHVWTVDYNNSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIH 633
RE+ SQHPYAE FIG+PHVWTVD NN EE E A+KAI+ +++PY+PYE+TCEGML+RI+
Sbjct: 558 RELTSQHPYAEVFIGRPHVWTVDLNNQEEVEDAVKAILNQKIEPYMPYEFTCEGMLQRIN 617
Query: 634 AYIQHQDFCRAPDPALPEAHAPQSPFVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAV 693
A+I+ QDFC WPP AL+ LA
Sbjct: 618 AFIEKQDFCH---------------------------------GQVMWPPLSALQVKLAE 644
Query: 694 PGRACTDTCLDHGLICEPSFFPFLNSQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYL 753
PG++C C + LICEPSFF LN LK +V C S+E + L P+F + C
Sbjct: 645 PGQSCKQVCQESQLICEPSFFQHLNKDKDMLKYKVTCQSSELAKDILVPSFDPKNKHCVF 704
Query: 754 QKEPLLFSCAGSNTKYRRLCPCRDFRKGQVALCQGCL 790
Q + LLFSCAG++ +++R+CPCRDF KGQVALC+ CL
Sbjct: 705 QGDLLLFSCAGAHPRHQRVCPCRDFIKGQVALCKDCL 741
>gi|5032243 makorin ring finger protein 3 [Homo sapiens]
Length = 507
Score = 32.0 bits (71), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 12/56 (21%)
Query: 644 APDPALPEAHAPQSPFVLAPNATHLEWARNTSLAP------GAWP---PAHALRAW 690
APD ALP A +PF +AP HL R L P GAWP P+ + W
Sbjct: 43 APDSALPHAARGWAPFPVAPVPAHL---RRGGLRPAPASGGGAWPSPLPSRSSGIW 95
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 31.6 bits (70), Expect = 3.0
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 30/126 (23%)
Query: 682 PPAHALRAWLAVPGRA----CTD-TCLDHGLICEPSFFPFLNSQDAFLKLQVPCDSTESE 736
P A+A +W P +A C + TC++ L+C P L A+ PC E
Sbjct: 4728 PSANA--SWELAPAQAVQLDCQNCTCVNESLVCPHQECPVLGPWSAWSSCSAPCGGGTME 4785
Query: 737 MNH-------LYPAFAQ---PGQECYLQKEP------LLFSCAGSNTKYRRLCPCRDFRK 780
+ + P AQ QEC LQ P +L +CA S CPC +
Sbjct: 4786 RHRTCEGGPGVAPCQAQDTEQRQECNLQPCPECPPGQVLSACATS-------CPCLCWHL 4838
Query: 781 GQVALC 786
A+C
Sbjct: 4839 QPGAIC 4844
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 31.2 bits (69), Expect = 3.9
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 642 CRAPDPALPEAHA-PQSPFVLAPNA-THLEWARNTSLAPGAWPPA 684
CRAPDPALP + A P P P + + R PG WP A
Sbjct: 86 CRAPDPALPVSVAVPPCPACRGPQSISRSRPRRAVRPRPGPWPAA 130
>gi|62739181 rhotekin isoform c [Homo sapiens]
Length = 513
Score = 30.4 bits (67), Expect = 6.7
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 647 PALPEAHAPQSPFVLAPNATH-LEWARNTSLAPGAWPPAHALRAWLAVP 694
PALP +P S AP+ TH L W R + + A PP H+ RA P
Sbjct: 440 PALPNPCSPAS-VAPAPDWTHPLPWGRPRTFSLDAVPPDHSPRARSVAP 487
>gi|62739179 rhotekin isoform a [Homo sapiens]
Length = 563
Score = 30.4 bits (67), Expect = 6.7
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 647 PALPEAHAPQSPFVLAPNATH-LEWARNTSLAPGAWPPAHALRAWLAVP 694
PALP +P S AP+ TH L W R + + A PP H+ RA P
Sbjct: 490 PALPNPCSPAS-VAPAPDWTHPLPWGRPRTFSLDAVPPDHSPRARSVAP 537
>gi|19526471 rhotekin isoform b [Homo sapiens]
Length = 550
Score = 30.4 bits (67), Expect = 6.7
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 647 PALPEAHAPQSPFVLAPNATH-LEWARNTSLAPGAWPPAHALRAWLAVP 694
PALP +P S AP+ TH L W R + + A PP H+ RA P
Sbjct: 477 PALPNPCSPAS-VAPAPDWTHPLPWGRPRTFSLDAVPPDHSPRARSVAP 524
>gi|38570109 CAP-binding protein complex interacting protein 1
isoform b [Homo sapiens]
Length = 1349
Score = 30.4 bits (67), Expect = 6.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 187 FFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKV 229
F G+ G S + E + C PWR A QR +P KV
Sbjct: 633 FLGLLGLRLSVTLNFREFQNLCEKRPWRTDEAPQRLIRPKQKV 675
>gi|38570107 CAP-binding protein complex interacting protein 1
isoform a [Homo sapiens]
Length = 1501
Score = 30.4 bits (67), Expect = 6.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 187 FFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKV 229
F G+ G S + E + C PWR A QR +P KV
Sbjct: 785 FLGLLGLRLSVTLNFREFQNLCEKRPWRTDEAPQRLIRPKQKV 827
>gi|27886566 mucosa associated lymphoid tissue lymphoma
translocation protein 1 isoform b [Homo sapiens]
Length = 813
Score = 30.0 bits (66), Expect = 8.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 320 ILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLPFDLIYTDYHGLQQMKRHM 378
I+ YV L + + K+ +N G P GS ++ LP +YT LQ++K H+
Sbjct: 615 IMCDAYVTDFPLDLDIDPKD--ANKGTPEETGSYLVSKDLPKHCLYTRLSSLQKLKEHL 671
>gi|5803078 mucosa associated lymphoid tissue lymphoma translocation
protein 1 isoform a [Homo sapiens]
Length = 824
Score = 30.0 bits (66), Expect = 8.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 320 ILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLPFDLIYTDYHGLQQMKRHM 378
I+ YV L + + K+ +N G P GS ++ LP +YT LQ++K H+
Sbjct: 626 IMCDAYVTDFPLDLDIDPKD--ANKGTPEETGSYLVSKDLPKHCLYTRLSSLQKLKEHL 682
>gi|44889963 CD163 antigen isoform b [Homo sapiens]
Length = 1121
Score = 30.0 bits (66), Expect = 8.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 1 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRL--GDSPFTIR 58
M+ + G RR V L PF + V+ + + CF+ +SLGG RL G++ + R
Sbjct: 6 MVLLEDSGSADFRRHFVNLSPFTITVVLL--LSACFVTSSLGGTDKELRLVDGENKCSGR 63
Query: 59 TEV 61
EV
Sbjct: 64 VEV 66
>gi|44662834 CD163 antigen isoform a [Homo sapiens]
Length = 1156
Score = 30.0 bits (66), Expect = 8.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 1 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRL--GDSPFTIR 58
M+ + G RR V L PF + V+ + + CF+ +SLGG RL G++ + R
Sbjct: 6 MVLLEDSGSADFRRHFVNLSPFTITVVLL--LSACFVTSSLGGTDKELRLVDGENKCSGR 63
Query: 59 TEV 61
EV
Sbjct: 64 VEV 66
>gi|28416923 purinergic receptor P2X2 isoform B [Homo sapiens]
Length = 404
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 241 LGFIVEKAGESFTELAHKGGVIGVIINW 268
>gi|28416921 purinergic receptor P2X2 isoform H [Homo sapiens]
Length = 379
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 149 LGFIVEKAGESFTELAHKGGVIGVIINW 176
>gi|27881423 purinergic receptor P2X2 isoform I [Homo sapiens]
Length = 399
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 169 LGFIVEKAGESFTELAHKGGVIGVIINW 196
>gi|25092733 purinergic receptor P2X2 isoform D [Homo sapiens]
Length = 497
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 241 LGFIVEKAGESFTELAHKGGVIGVIINW 268
>gi|25092719 purinergic receptor P2X2 isoform A [Homo sapiens]
Length = 471
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 241 LGFIVEKAGESFTELAHKGGVIGVIINW 268
>gi|7706629 purinergic receptor P2X2 isoform C [Homo sapiens]
Length = 447
Score = 30.0 bits (66), Expect = 8.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 290 IGFLTEESGDVFSPRVLKGGPLGEMVQW 317
+GF+ E++G+ F+ KGG +G ++ W
Sbjct: 217 LGFIVEKAGESFTELAHKGGVIGVIINW 244
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 30.0 bits (66), Expect = 8.7
Identities = 17/50 (34%), Positives = 21/50 (42%)
Query: 640 DFCRAPDPALPEAHAPQSPFVLAPNATHLEWARNTSLAPGAWPPAHALRA 689
D RA P LP P P + PN T +++S AP PP A
Sbjct: 139 DSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANA 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,169,332
Number of Sequences: 37866
Number of extensions: 1647112
Number of successful extensions: 3774
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3752
Number of HSP's gapped (non-prelim): 33
length of query: 790
length of database: 18,247,518
effective HSP length: 110
effective length of query: 680
effective length of database: 14,082,258
effective search space: 9575935440
effective search space used: 9575935440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.