| Name: LOC728358 | Sequence: fasta or formatted (94aa) | NCBI GI: 124248516 | |
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Description: alpha-defensin 1
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 20.2 19 3 C cysteine 6.4 6 2 D aspartate 3.2 3 1 E glutamate 6.4 6 1 F phenylalanine 1.1 1 1 G glycine 4.3 4 1 H histidine 1.1 1 1 I isoleucine 7.4 7 1 K lysine 2.1 2 1 L leucine 9.6 9 2 M methionine 2.1 2 1 N asparagine 1.1 1 1 P proline 6.4 6 1 Q glutamine 5.3 5 1 R arginine 7.4 7 2 S serine 3.2 3 1 T threonine 2.1 2 1 V valine 5.3 5 3 W tryptophan 2.1 2 1 Y tyrosine 3.2 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 alpha-defensin 1 DEFA1 1.000 defensin, alpha 1 preproprotein DEFA3 0.988 defensin, alpha 3 preproprotein DEFA4 0.349 defensin, alpha 4 preproprotein DEFA5 0.337 defensin, alpha 5 preproprotein DEFA6 0.296 defensin, alpha 6 preproprotein FAM180B 0.012 PREDICTED: hypothetical protein FAM180B 0.012 PREDICTED: hypothetical protein FAM180B 0.012 PREDICTED: hypothetical protein EPHB2 0.012 ephrin receptor EphB2 isoform 1 precursor EPHB2 0.012 ephrin receptor EphB2 isoform 2 precursor FAM48B1 0.012 hypothetical protein LOC100130302 SP2 0.006 Sp2 transcription factorHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
