Search of human proteins with 37039612

Search of human proteins with 37039612

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|37039612 hypothetical protein LOC203228 isoform a [Homo
sapiens]
         (481 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens]   963   0.0  
gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens]   446   e-125
gi|42558246 lysocardiolipin acyltransferase 1 isoform 1 [Homo sa...    31   2.2  
gi|50659059 lysocardiolipin acyltransferase 1 isoform 2 [Homo sa...    31   2.2  
gi|110224476 prosaposin isoform b preproprotein [Homo sapiens]         31   2.9  
gi|38569394 inhibitor of kappa light polypeptide gene enhancer i...    31   2.9  
gi|9966881 nucleoporin 107kDa [Homo sapiens]                           30   4.9  
gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]    30   4.9  
gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]    30   4.9  
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]    30   4.9  
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]    30   4.9  
gi|29244926 corin [Homo sapiens]                                       30   6.4  
gi|110224479 prosaposin isoform c preproprotein [Homo sapiens]         29   8.3  
gi|110735439 Werner syndrome protein [Homo sapiens]                    29   8.3  
gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent...    29   8.3  
gi|27477070 BTAF1 RNA polymerase II, B-TFIID transcription facto...    29   8.3  

>gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens]
          Length = 481

 Score =  963 bits (2490), Expect = 0.0
 Identities = 481/481 (100%), Positives = 481/481 (100%)

Query: 1   MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT 60
           MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
Sbjct: 1   MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT 60

Query: 61  FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE 120
           FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
Sbjct: 61  FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE 120

Query: 121 LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV 180
           LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
Sbjct: 121 LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV 180

Query: 181 IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS 240
           IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
Sbjct: 181 IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS 240

Query: 241 AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY 300
           AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
Sbjct: 241 AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY 300

Query: 301 APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF 360
           APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
Sbjct: 301 APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF 360

Query: 361 TPDLNIFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT 420
           TPDLNIFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
Sbjct: 361 TPDLNIFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT 420

Query: 421 QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT 480
           QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
Sbjct: 421 QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT 480

Query: 481 F 481
           F
Sbjct: 481 F 481


>gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens]
          Length = 222

 Score =  446 bits (1146), Expect = e-125
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT 60
           MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
Sbjct: 1   MSTLCPPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT 60

Query: 61  FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE 120
           FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
Sbjct: 61  FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE 120

Query: 121 LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV 180
           LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
Sbjct: 121 LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV 180

Query: 181 IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLL 221
           IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLL
Sbjct: 181 IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLL 221


>gi|42558246 lysocardiolipin acyltransferase 1 isoform 1 [Homo
           sapiens]
          Length = 414

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 120 ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKI--ILEGTERMEDQGQSIIPMLT 177
           E+ F++  HR  +D L       ++W HK  +E  +++    +G +     GQS+IP   
Sbjct: 280 EIHFHV--HRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCK 337

Query: 178 GEV-IPVMELLS 188
            E+ + V++LLS
Sbjct: 338 SELRVLVVKLLS 349


>gi|50659059 lysocardiolipin acyltransferase 1 isoform 2 [Homo
           sapiens]
          Length = 376

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 120 ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKI--ILEGTERMEDQGQSIIPMLT 177
           E+ F++  HR  +D L       ++W HK  +E  +++    +G +     GQS+IP   
Sbjct: 242 EIHFHV--HRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCK 299

Query: 178 GEV-IPVMELLS 188
            E+ + V++LLS
Sbjct: 300 SELRVLVVKLLS 311


>gi|110224476 prosaposin isoform b preproprotein [Homo sapiens]
          Length = 527

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 143 RIWMHKERQENVQKIILEG--TERMEDQGQSIIP--MLTGEVIPVMELLSSMKSHSVPEE 198
           ++ MH + Q+  +   L G   E  E   Q+++P  + +  VIP +EL+  +K H VP +
Sbjct: 254 QMMMHMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAK 313

Query: 199 IDI 201
            D+
Sbjct: 314 SDV 316


>gi|38569394 inhibitor of kappa light polypeptide gene enhancer in
           B-cells, kinase complex-associated protein [Homo
           sapiens]
          Length = 1332

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 402 LLVLHRKALTLIKYIED-DTQKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLH 460
           L V+H +AL L +  +  D    K+ F+ +R L+I+L+L  + +  + +   E     + 
Sbjct: 716 LEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQID 775

Query: 461 SFIFGRPFYTSVQERDVLMT 480
           S      F+T ++E DV  T
Sbjct: 776 SVNHINLFFTELKEEDVTKT 795


>gi|9966881 nucleoporin 107kDa [Homo sapiens]
          Length = 925

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 13/88 (14%)

Query: 186 LLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSV---------V 236
           L ++ + HS+ E++ I+  +L +DD G++       + + S L+    +V         +
Sbjct: 121 LFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENI 180

Query: 237 VGSSAEKVNKIVRTLCLFLTPAERKCSR 264
            GS    ++KIV       TP  +K S+
Sbjct: 181 CGSQVNILSKIVSR----ATPGLQKFSK 204


>gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]
          Length = 1031

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 6   PPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEITFLANH 65
           PP  P+V   E  + G   +L+ + A W+ +   +  ++WA  +   + S    T +  H
Sbjct: 423 PPSLPSVPLLESLVMGPQGVLSESKALWETM--GQKENLWASDSPDPVHSTPPTTLMEPH 480

Query: 66  TLN-GEILRNAES 77
            +N GE L  +E+
Sbjct: 481 RINPGECLATSEA 493


>gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]
          Length = 1006

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 6   PPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEITFLANH 65
           PP  P+V   E  + G   +L+ + A W+ +   +  ++WA  +   + S    T +  H
Sbjct: 398 PPSLPSVPLLESLVMGPQGVLSESKALWETM--GQKENLWASDSPDPVHSTPPTTLMEPH 455

Query: 66  TLN-GEILRNAES 77
            +N GE L  +E+
Sbjct: 456 RINPGECLATSEA 468


>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
          Length = 1044

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 6   PPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEITFLANH 65
           PP  P+V   E  + G   +L+ + A W+ +   +  ++WA  +   + S    T +  H
Sbjct: 436 PPSLPSVPLLESLVMGPQGVLSESKALWETM--GQKENLWASDSPDPVHSTPPTTLMEPH 493

Query: 66  TLN-GEILRNAES 77
            +N GE L  +E+
Sbjct: 494 RINPGECLATSEA 506


>gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]
          Length = 1079

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 6   PPPSPAVAKTEIALSGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEITFLANH 65
           PP  P+V   E  + G   +L+ + A W+ +   +  ++WA  +   + S    T +  H
Sbjct: 471 PPSLPSVPLLESLVMGPQGVLSESKALWETM--GQKENLWASDSPDPVHSTPPTTLMEPH 528

Query: 66  TLN-GEILRNAES 77
            +N GE L  +E+
Sbjct: 529 RINPGECLATSEA 541


>gi|29244926 corin [Homo sapiens]
          Length = 1042

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 16/120 (13%)

Query: 211 IGDSCHEGFLLNAISSHLQTCGCSVVVG-----SSAEKVNKIVRTLCLFL----TPAERK 261
           I  SC EG      +  L +CG S +       ++  +   I   LC+ L    T     
Sbjct: 417 IQTSCQEGDQRCLYNPCLDSCGGSSLCDPNNSLNNCSQCEPITLELCMNLPYNSTSYPNY 476

Query: 262 CSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMYAPYPTTHIDVDVNTVKQMPPC 321
                + E+S  +ES LF   L++ +   +++ F   +  P        DVNT + +PPC
Sbjct: 477 FGHRTQKEASISWESSLF-PALVQTNCYKYLMFFSCTILVP------KCDVNTGEHIPPC 529


>gi|110224479 prosaposin isoform c preproprotein [Homo sapiens]
          Length = 526

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 143 RIWMHKERQ-ENVQKIILEGTERMEDQGQSIIP--MLTGEVIPVMELLSSMKSHSVPEEI 199
           ++ MH ++Q + +  ++    E  E   Q+++P  + +  VIP +EL+  +K H VP + 
Sbjct: 254 QMMMHMDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKS 313

Query: 200 DI 201
           D+
Sbjct: 314 DV 315


>gi|110735439 Werner syndrome protein [Homo sapiens]
          Length = 1432

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 120  ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERM 165
            E+S Y    ++C      + +KGR W+HK   E+ Q +IL+  E +
Sbjct: 1030 EVSRYNKFMKICA-----LTKKGRNWLHKANTES-QSLILQANEEL 1069


>gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent
           helicase, partial [Homo sapiens]
          Length = 1140

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 120 ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERM 165
           E+S Y    ++C      + +KGR W+HK   E+ Q +IL+  E +
Sbjct: 738 EVSRYNKFMKICA-----LTKKGRNWLHKANTES-QSLILQANEEL 777


>gi|27477070 BTAF1 RNA polymerase II, B-TFIID transcription
           factor-associated, 170kDa [Homo sapiens]
          Length = 1849

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 158 ILEGTERMEDQGQSIIPMLTGEVIPVMELLSSMKSHSVPEEID-IADTVLNDDDIGDSCH 216
           I+EG + ++D  +++       ++PV+E L  +++  VP  I+ + D +L  DD+  S +
Sbjct: 435 IIEGLQDLDDDVRAVA---AASLVPVVESLVYLQTQKVPFIINTLWDALLELDDLTASTN 491

Query: 217 EGF-LLNAISSHLQTCGCSV 235
               LL+++ ++ Q   CS+
Sbjct: 492 SIMTLLSSLLTYPQVQQCSI 511


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,779,621
Number of Sequences: 37866
Number of extensions: 758320
Number of successful extensions: 1610
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1605
Number of HSP's gapped (non-prelim): 19
length of query: 481
length of database: 18,247,518
effective HSP length: 106
effective length of query: 375
effective length of database: 14,233,722
effective search space: 5337645750
effective search space used: 5337645750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.