Search of human proteins with 122937458

Search of human proteins with 122937458

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122937458 hypothetical protein LOC441027 [Homo sapiens]
         (249 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122937458 hypothetical protein LOC441027 [Homo sapiens]            502   e-142
gi|148232433 transmembrane protein 150B [Homo sapiens]                107   1e-23
gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens]       105   4e-23
gi|166235182 transmembrane protein 77 [Homo sapiens]                   75   5e-14
gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo sa...    66   3e-11
gi|23503273 transmembrane protein 150A isoform 2 [Homo sapiens]        60   1e-09
gi|4507525 translocation protein 1 [Homo sapiens]                      31   1.2  
gi|209954825 minichromosome maintenance complex component-like i...    30   1.5  
gi|209954823 minichromosome maintenance complex component-like i...    30   1.5  
gi|209954821 minichromosome maintenance complex component-like i...    30   1.5  
gi|4885333 free fatty acid receptor 2 [Homo sapiens]                   28   5.7  
gi|170763479 MMS19 nucleotide excision repair homolog [Homo sapi...    28   7.5  

>gi|122937458 hypothetical protein LOC441027 [Homo sapiens]
          Length = 249

 Score =  502 bits (1292), Expect = e-142
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MDGKKCSVWMFLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGD 60
           MDGKKCSVWMFLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGD
Sbjct: 1   MDGKKCSVWMFLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGD 60

Query: 61  DPPASCVFSQVMNMAAFLALVVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNF 120
           DPPASCVFSQVMNMAAFLALVVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNF
Sbjct: 61  DPPASCVFSQVMNMAAFLALVVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNF 120

Query: 121 QLTNDEEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVL 180
           QLTNDEEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVL
Sbjct: 121 QLTNDEEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVL 180

Query: 181 YFILMAQSIHMYAARVQWGLVMCFLSYFGTFAVEFRHYRYEIVCSEYQENFLSFSESLSE 240
           YFILMAQSIHMYAARVQWGLVMCFLSYFGTFAVEFRHYRYEIVCSEYQENFLSFSESLSE
Sbjct: 181 YFILMAQSIHMYAARVQWGLVMCFLSYFGTFAVEFRHYRYEIVCSEYQENFLSFSESLSE 240

Query: 241 ASEYQTDQV 249
           ASEYQTDQV
Sbjct: 241 ASEYQTDQV 249


>gi|148232433 transmembrane protein 150B [Homo sapiens]
          Length = 233

 Score =  107 bits (267), Expect = 1e-23
 Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 10/205 (4%)

Query: 12  LPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGDDPPASCVFSQV 71
           +P+   ++  +G+WIV+ IAV + + + L+        K  PYISI G  PP SC+FSQV
Sbjct: 8   MPVFLAVWAISGVWIVFAIAVTN-RTVDLS--------KGFPYISICGSFPPQSCIFSQV 58

Query: 72  MNMAAFLALVVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNFQLTNDEEIHNV 131
           +NM A LA  + ++R+ QL+   +  W N   L    L + G +++GNFQ  N    H  
Sbjct: 59  LNMGAALAAWICIVRYHQLRDWGVRRWPNQLILWTGLLCALGTSVVGNFQEKNQRPTHLA 118

Query: 132 GTSLTFGFGTLTCWIQAALTLKVNIKNEGRR-VGIPRVILSASITLCVVLYFILMAQSIH 190
           G  L F  G +  W+Q  L     +   G   +G  R+ L +  T+ +V   +L A S+ 
Sbjct: 119 GAFLAFILGNVYFWLQLLLWRLKRLPQPGAAWIGPLRLGLCSVCTILIVAMIVLHACSLR 178

Query: 191 MYAARVQWGLVMCFLSYFGTFAVEF 215
             +A  +W + M   + FG  AV+F
Sbjct: 179 SVSAACEWVVAMLLFALFGLLAVDF 203


>gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens]
          Length = 271

 Score =  105 bits (262), Expect = 4e-23
 Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 19/228 (8%)

Query: 7   SVWMFLPLVFTLFTSAGLWIVYFIAVEDDKILPLNS----------AERKPGVK------ 50
           + W+ LP+  + F+  G+W VY +AV +  + P+ +             + G K      
Sbjct: 2   TAWILLPVSLSAFSITGIWTVYAMAVMNHHVCPVENWSYNESCPPDPAEQGGPKTCCTLD 61

Query: 51  HAPYISIAGDDPPASCVFSQVMNMAAFLALVVAVLRFIQLKPKVLNPWLNISGLVALCLA 110
             P IS  G  PP SC+FS + NM AF+  ++ +LR+ QL  +  + W+N + L+  C  
Sbjct: 62  DVPLISKCGSYPPESCLFSLIGNMGAFMVALICLLRYGQLLEQSRHSWVNTTALITGCTN 121

Query: 111 SFGMTLLGNFQLTNDEEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVIL 170
           + G+ ++GNFQ+ +   +H VG  + F  G L   +  AL+ +         V   R +L
Sbjct: 122 AAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVL 181

Query: 171 SASITLCVVL---YFILMAQSIHMYAARVQWGLVMCFLSYFGTFAVEF 215
           +    + +VL   +F+  +  +   AA  +W  V+  L ++GTF+ EF
Sbjct: 182 AVIAFITLVLSGVFFVHESSQLQHGAALCEWVCVIDILIFYGTFSYEF 229


>gi|166235182 transmembrane protein 77 [Homo sapiens]
          Length = 266

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 48/238 (20%)

Query: 11  FLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGDDPPASCVFSQ 70
           FLP    ++TSA     Y  AV    I P             PYIS  G   P  C+F  
Sbjct: 10  FLPSALVIWTSAAFIFSYITAVTLHHIDPA-----------LPYISDTGTVAPEKCLFGA 58

Query: 71  VMNMAAFLALVVAVLRFIQLKPKVLNPW------LNISGLVALCLASFGMTLLGNFQLTN 124
           ++N+AA L +    +R+ Q+    L+P       LN +GLV   L+  G++++ NFQ T 
Sbjct: 59  MLNIAAVLCIATIYVRYKQVH--ALSPEENVIIKLNKAGLVLGILSCLGLSIVANFQKTT 116

Query: 125 DEEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVLYFIL 184
               H  G  LTFG G+L  ++Q  L+ ++  K  G++V   R++L   +  C V    +
Sbjct: 117 LFAAHVSGAVLTFGMGSLYMFVQTILSYQMQPKIHGKQVFWIRLLL---VIWCGVSALSM 173

Query: 185 MAQS--------------------------IHMYAARVQWGLVMCFLSYFGTFAVEFR 216
           +  S                          +HM     +W +   F  +F T+  +F+
Sbjct: 174 LTCSSVLHSGNFGTDLEQKLHWNPEDKGYVLHMITTAAEWSMSFSFFGFFLTYIRDFQ 231


>gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo
           sapiens]
          Length = 238

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 33/227 (14%)

Query: 11  FLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGDDPPASCVFSQ 70
           F+P +   ++SA   I Y +AV    + P             PYIS  G  PP S +F  
Sbjct: 10  FVPFLLVTWSSAAFIISYVVAVLSGHVNPF-----------LPYISDTGTTPPESGIFGF 58

Query: 71  VMNMAAFLALVVAVLRF--IQLKPKVL---NPWLNISGLVALCLASFGMTLLGNFQLTND 125
           ++N +AFL       R+  +Q + +      P  N+  LV   +  FGM ++ NFQ    
Sbjct: 59  MINFSAFLGAATMYTRYKIVQKQNQTCYFSTPVFNLVSLVLGLVGCFGMGIVANFQELAV 118

Query: 126 EEIHNVGTSLTFGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVLYFILM 185
             +H+ G  L F  G +   +Q+ ++ K   +         R+++SA ++   V+  I+ 
Sbjct: 119 PVVHDGGALLAFVCGVVYTLLQSIISYKSCPQWNSLSTCHIRMVISA-VSCAAVIPMIVC 177

Query: 186 AQSI----------------HMYAARVQWGLVMCFLSYFGTFAVEFR 216
           A  I                H+ +A  +W +   F+ YF TF  +F+
Sbjct: 178 ASLISITKLEWNPREKDYVYHVVSAICEWTVAFGFIFYFLTFIQDFQ 224


>gi|23503273 transmembrane protein 150A isoform 2 [Homo sapiens]
          Length = 218

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 3/138 (2%)

Query: 81  VVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNFQLTNDEEIHNVGTSLTFGFG 140
           ++ +LR+ QL  +  + W+N + L+  C  + G+ ++GNFQ+ +   +H VG  + F  G
Sbjct: 39  LICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAG 98

Query: 141 TLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVL---YFILMAQSIHMYAARVQ 197
            L   +  AL+ +         V   R +L+    + +VL   +F+  +  +   AA  +
Sbjct: 99  LLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALCE 158

Query: 198 WGLVMCFLSYFGTFAVEF 215
           W  V+    ++GTF+ EF
Sbjct: 159 WVCVIDIPIFYGTFSYEF 176


>gi|4507525 translocation protein 1 [Homo sapiens]
          Length = 399

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 1   MDGKKCSVWMFLPLVFTLFTSAGLWIVYFIAVEDDKILPLNSAERKPGVKHAPYISIAGD 60
           +DG +  VW++ P+ F  F    + ++  IAV    + PL  AE + GV    Y+S+   
Sbjct: 179 LDGNEVYVWIYDPVHFKTFV---MGLILVIAVIAATLFPLWPAEMRVGVY---YLSVG-- 230

Query: 61  DPPASCVFSQVMNMAAFLALVVAVLRFI 88
              A C  + ++ +A    ++  ++  I
Sbjct: 231 ---AGCFVASILLLAVARCILFLIIWLI 255


>gi|209954825 minichromosome maintenance complex component-like
           isoform c [Homo sapiens]
          Length = 590

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 137 FGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCV 178
           F F +LT +++     K+NI NE + +GIP  + ++   +C+
Sbjct: 226 FRFQSLTIFLRDESVNKMNIGNEYKIIGIPTCVKTSQTAVCI 267


>gi|209954823 minichromosome maintenance complex component-like
           isoform b [Homo sapiens]
          Length = 632

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 137 FGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCV 178
           F F +LT +++     K+NI NE + +GIP  + ++   +C+
Sbjct: 226 FRFQSLTIFLRDESVNKMNIGNEYKIIGIPTCVKTSQTAVCI 267


>gi|209954821 minichromosome maintenance complex component-like
           isoform a [Homo sapiens]
          Length = 681

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 137 FGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCV 178
           F F +LT +++     K+NI NE + +GIP  + ++   +C+
Sbjct: 226 FRFQSLTIFLRDESVNKMNIGNEYKIIGIPTCVKTSQTAVCI 267


>gi|4885333 free fatty acid receptor 2 [Homo sapiens]
          Length = 330

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 168 VILSASITLCVVLYFILMAQSIHMYAARVQWGLVMCFLS 206
           V+L   + LC+VL+FI MA +I  Y     W  V   LS
Sbjct: 175 VVLPVRLELCLVLFFIPMAVTIFCY-----WRFVWIMLS 208


>gi|170763479 MMS19 nucleotide excision repair homolog [Homo
           sapiens]
          Length = 1030

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 116 LLGNFQLTNDEEIHNVGTSLTFGF 139
           ++ NF  T +EE+ ++G   TFGF
Sbjct: 154 IITNFMRTREEELKSLGADFTFGF 177


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,677,517
Number of Sequences: 37866
Number of extensions: 327890
Number of successful extensions: 835
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 813
Number of HSP's gapped (non-prelim): 13
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.