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Search of human proteins with 32261307
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32261307 aarF domain containing kinase 2 [Homo sapiens]
(626 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32261307 aarF domain containing kinase 2 [Homo sapiens] 1243 0.0
gi|217035081 aarF domain containing kinase 1 isoform b [Homo sap... 65 2e-10
gi|40254938 aarF domain containing kinase 1 isoform a [Homo sapi... 65 2e-10
gi|41393593 aarF domain containing kinase 5 [Homo sapiens] 54 6e-07
gi|217416386 aarF domain containing kinase 4 isoform b [Homo sap... 44 6e-04
gi|27363457 aarF domain containing kinase 4 isoform a [Homo sapi... 44 6e-04
gi|120659787 protein kinase D2 isoform B [Homo sapiens] 33 0.60
gi|120659785 protein kinase D2 isoform A [Homo sapiens] 33 0.60
gi|120659782 protein kinase D2 isoform A [Homo sapiens] 33 0.60
gi|19923468 protein kinase D2 isoform A [Homo sapiens] 33 0.60
gi|115529463 protein kinase D1 [Homo sapiens] 33 1.0
gi|5031689 protein kinase D3 [Homo sapiens] 32 2.3
gi|47519913 5-hydroxytryptamine receptor 3 subunit E [Homo sapiens] 32 2.3
gi|16418413 solute carrier family 26, member 9 isoform a [Homo s... 30 5.1
gi|217272867 solute carrier family 26, member 9 isoform b [Homo ... 30 5.1
gi|21361116 versican isoform 1 [Homo sapiens] 30 6.7
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 30 8.7
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 30 8.7
>gi|32261307 aarF domain containing kinase 2 [Homo sapiens]
Length = 626
Score = 1243 bits (3216), Expect = 0.0
Identities = 626/626 (100%), Positives = 626/626 (100%)
Query: 1 MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEG 60
MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEG
Sbjct: 1 MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEG 60
Query: 61 APDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLT 120
APDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLT
Sbjct: 61 APDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLT 120
Query: 121 YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWT 180
YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWT
Sbjct: 121 YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWT 180
Query: 181 HTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPP 240
HTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPP
Sbjct: 181 HTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPP 240
Query: 241 FSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQP 300
FSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQP
Sbjct: 241 FSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQP 300
Query: 301 EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQ 360
EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQ
Sbjct: 301 EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQ 360
Query: 361 IDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL 420
IDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL
Sbjct: 361 IDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL 420
Query: 421 KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAV 480
KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAV
Sbjct: 421 KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAV 480
Query: 481 PSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVE 540
PSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVE
Sbjct: 481 PSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVE 540
Query: 541 GFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGL 600
GFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGL
Sbjct: 541 GFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGL 600
Query: 601 GRSLDPKLDILEAARPFLLTGPVCPP 626
GRSLDPKLDILEAARPFLLTGPVCPP
Sbjct: 601 GRSLDPKLDILEAARPFLLTGPVCPP 626
>gi|217035081 aarF domain containing kinase 1 isoform b [Homo
sapiens]
Length = 455
Score = 64.7 bits (156), Expect = 2e-10
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 307 SVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYE 366
+VAVKV HP + AQ D+LLM++ VL V +V+E +K + ++D E
Sbjct: 104 TVAVKVQHPKVRAQSSKDILLMEV--LVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNE 161
Query: 367 AQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSS--YQQAGIPVDLKRKI 424
+N E R+ +K P T VL+ + + V+ Y + +D+
Sbjct: 162 GRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERN-KIDVNEIS 220
Query: 425 ARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQ 463
LG M +MIFV+ FVH D HPGN+LV+ G ++
Sbjct: 221 RHLG-KMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAE 258
>gi|40254938 aarF domain containing kinase 1 isoform a [Homo
sapiens]
Length = 523
Score = 64.7 bits (156), Expect = 2e-10
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 307 SVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYE 366
+VAVKV HP + AQ D+LLM++ VL V +V+E +K + ++D E
Sbjct: 172 TVAVKVQHPKVRAQSSKDILLMEV--LVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNE 229
Query: 367 AQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSS--YQQAGIPVDLKRKI 424
+N E R+ +K P T VL+ + + V+ Y + +D+
Sbjct: 230 GRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERN-KIDVNEIS 288
Query: 425 ARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQ 463
LG M +MIFV+ FVH D HPGN+LV+ G ++
Sbjct: 289 RHLG-KMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAE 326
Score = 32.7 bits (73), Expect = 1.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 144 TYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTERFLRQAFGDDWGSILSFENR 203
T+IK+GQ L E + + LH + + +R+ G + + +
Sbjct: 92 TFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDD 151
Query: 204 EPVGSGCVAQVYKA 217
P+G+ +AQV+KA
Sbjct: 152 TPLGTASLAQVHKA 165
>gi|41393593 aarF domain containing kinase 5 [Homo sapiens]
Length = 580
Score = 53.5 bits (127), Expect = 6e-07
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 22/289 (7%)
Query: 288 AGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLP---GIKWL 344
A S AQV H+ + + SVAVKV + L + D+ +++ R++ V+ G W
Sbjct: 207 AAASLAQV--HRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFGFSW- 263
Query: 345 SLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
++++ + + Q++D E +N E + V P ++ VL +
Sbjct: 264 ----VLQDLKGTLAQELDFENEGRNAERCARELAHFPYVVVPRVHWDKSSKRVLTADFCA 319
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQE 464
V+ + IA I + IF F+H+D HPGN+LV+ G E
Sbjct: 320 GCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIHSDPHPGNVLVR--KGPDGKAE 377
Query: 465 AQLQQADICDTLVVAVPSSLCPL-RLVLL--DAGIVAELQAPDLRNFRAVFMAVVMGQGQ 521
L + L ++LC L R ++L DA + A A ++++ +F ++M +
Sbjct: 378 LVLLDHGLYQFLEEKDRAALCQLWRAIILRDDAAMRAHAAALGVQDY-LLFAEMLMQRPV 436
Query: 522 RVAEL----ILHHARASECRDV--EGFKTEMAMLVTQARKNTITLEKLH 564
R+ +L +L A+ D+ E F+ MA+L R + L ++
Sbjct: 437 RLGQLWGSHLLSREEAAYMVDMARERFEAVMAVLRELPRPMLLVLRNIN 485
>gi|217416386 aarF domain containing kinase 4 isoform b [Homo
sapiens]
Length = 503
Score = 43.5 bits (101), Expect = 6e-04
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 288 AGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP 347
A S QV HQ + VAVK+ +PG+ + D+ + ++ LP L
Sbjct: 175 AAASIGQV--HQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPA--GLFAE 230
Query: 348 EIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVP 407
+ ++ ++ + + D R EA ++F+ N + P ++ T VL VP
Sbjct: 231 QSLQALQQELAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVP 290
Query: 408 VSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ Q G+ DL+ +I + + L+ +F F+ D + N L ++
Sbjct: 291 LDQCQ--GLSQDLRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASS 338
>gi|27363457 aarF domain containing kinase 4 isoform a [Homo
sapiens]
Length = 544
Score = 43.5 bits (101), Expect = 6e-04
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 288 AGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP 347
A S QV HQ + VAVK+ +PG+ + D+ + ++ LP L
Sbjct: 216 AAASIGQV--HQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPA--GLFAE 271
Query: 348 EIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVP 407
+ ++ ++ + + D R EA ++F+ N + P ++ T VL VP
Sbjct: 272 QSLQALQQELAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVP 331
Query: 408 VSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ Q G+ DL+ +I + + L+ +F F+ D + N L ++
Sbjct: 332 LDQCQ--GLSQDLRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASS 379
>gi|120659787 protein kinase D2 isoform B [Homo sapiens]
Length = 721
Score = 33.5 bits (75), Expect = 0.60
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 296 PGHQPEATNLISVAV---KVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP----- 347
PGH P +S++V ++ +A V+ +GS GV+ G K
Sbjct: 363 PGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAV 422
Query: 348 EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
+++++ Q+ LR E Q+L H N++ + F TP + FV E L E
Sbjct: 423 KVIDKLRFPTKQESQLRNEVAILQSLRH--PGIVNLECM-FETPEKVFVVMEKLHGDMLE 479
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ S ++ +P L K I + L+ + N VH DL P N+L+ A+
Sbjct: 480 MI--LSSEKGRLPERLT-KFLITQILVALRHLHFKNIVHCDLKPENVLLASAD 529
>gi|120659785 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 33.5 bits (75), Expect = 0.60
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 296 PGHQPEATNLISVAV---KVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP----- 347
PGH P +S++V ++ +A V+ +GS GV+ G K
Sbjct: 520 PGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAV 579
Query: 348 EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
+++++ Q+ LR E Q+L H N++ + F TP + FV E L E
Sbjct: 580 KVIDKLRFPTKQESQLRNEVAILQSLRH--PGIVNLECM-FETPEKVFVVMEKLHGDMLE 636
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ S ++ +P L K I + L+ + N VH DL P N+L+ A+
Sbjct: 637 MI--LSSEKGRLPERLT-KFLITQILVALRHLHFKNIVHCDLKPENVLLASAD 686
>gi|120659782 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 33.5 bits (75), Expect = 0.60
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 296 PGHQPEATNLISVAV---KVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP----- 347
PGH P +S++V ++ +A V+ +GS GV+ G K
Sbjct: 520 PGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAV 579
Query: 348 EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
+++++ Q+ LR E Q+L H N++ + F TP + FV E L E
Sbjct: 580 KVIDKLRFPTKQESQLRNEVAILQSLRH--PGIVNLECM-FETPEKVFVVMEKLHGDMLE 636
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ S ++ +P L K I + L+ + N VH DL P N+L+ A+
Sbjct: 637 MI--LSSEKGRLPERLT-KFLITQILVALRHLHFKNIVHCDLKPENVLLASAD 686
>gi|19923468 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 33.5 bits (75), Expect = 0.60
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 296 PGHQPEATNLISVAV---KVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP----- 347
PGH P +S++V ++ +A V+ +GS GV+ G K
Sbjct: 520 PGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAV 579
Query: 348 EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
+++++ Q+ LR E Q+L H N++ + F TP + FV E L E
Sbjct: 580 KVIDKLRFPTKQESQLRNEVAILQSLRH--PGIVNLECM-FETPEKVFVVMEKLHGDMLE 636
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
+ S ++ +P L K I + L+ + N VH DL P N+L+ A+
Sbjct: 637 MI--LSSEKGRLPERLT-KFLITQILVALRHLHFKNIVHCDLKPENVLLASAD 686
>gi|115529463 protein kinase D1 [Homo sapiens]
Length = 912
Score = 32.7 bits (73), Expect = 1.0
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 31/194 (15%)
Query: 277 LLPKADLVGSNAGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLM-----KIG 331
++PK VG+ + R ISV++ V + + V + + +G
Sbjct: 543 VIPKGSSVGTGTNLHRD------------ISVSISVSNCQIQENVDISTVYQIFPDEVLG 590
Query: 332 SRVLGVLPGIKWLSLP-----EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAV 383
S G++ G K +I+++ Q+ LR E QNL H V N++ +
Sbjct: 591 SGQFGIVYGGKHRKTGRDVAIKIIDKLRFPTKQESQLRNEVAILQNLHHPGVV--NLECM 648
Query: 384 KFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVH 443
F TP R FV E L E + S ++ +P + K I + L+ + N VH
Sbjct: 649 -FETPERVFVVMEKLHGDMLEMI--LSSEKGRLPEHIT-KFLITQILVALRHLHFKNIVH 704
Query: 444 ADLHPGNILVQGAN 457
DL P N+L+ A+
Sbjct: 705 CDLKPENVLLASAD 718
>gi|5031689 protein kinase D3 [Homo sapiens]
Length = 890
Score = 31.6 bits (70), Expect = 2.3
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 348 EIVEEFEKLMVQQIDLRYEA---QNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEE 404
+++++ Q+ LR E QNL H N++ + F TP R FV E L E
Sbjct: 605 KVIDKMRFPTKQESQLRNEVAILQNLHH--PGIVNLECM-FETPERVFVVMEKLHGDMLE 661
Query: 405 SVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGA 456
+ S +++ +P + K I + L+ + N VH DL P N+L+ A
Sbjct: 662 MI--LSSEKSRLPERIT-KFMVTQILVALRNLHFKNIVHCDLKPENVLLASA 710
>gi|47519913 5-hydroxytryptamine receptor 3 subunit E [Homo sapiens]
Length = 471
Score = 31.6 bits (70), Expect = 2.3
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 81 AESLPRAG-PLGGVFLHLRLWLRAGALLVKFFPLLLLYPLTYLAPSVSTLWLHLLLKATE 139
++ LP +G PL GV+ L L L G+LL F LL+ T P + WLH LL
Sbjct: 312 SDLLPTSGTPLIGVYFALCLSLMVGSLLETIFITHLLHVATTQPPPLPR-WLHSLLLHCN 370
Query: 140 TSG 142
+ G
Sbjct: 371 SPG 373
>gi|16418413 solute carrier family 26, member 9 isoform a [Homo
sapiens]
Length = 791
Score = 30.4 bits (67), Expect = 5.1
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 19/134 (14%)
Query: 385 FPTPLRPFVTREVLVETYEESVPVSSY-----------QQAGIPVDLKRKIARLGINMLL 433
FPTP+ P V++ + S+ + SY + G VD +++ LG +
Sbjct: 319 FPTPVSPVVSQWKDMIGTAFSLAIVSYVINLAMGRTLANKHGYDVDSNQEMIALGCSNFF 378
Query: 434 KMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAVPSSLCPLRLVLLD 493
F + + L + V GA G S Q A +C +LVV + + + L L
Sbjct: 379 GSFFKIHVICCALSV-TLAVDGAGGKS-------QVASLCVSLVVMITMLVLGIYLYPLP 430
Query: 494 AGIVAELQAPDLRN 507
++ L A +L+N
Sbjct: 431 KSVLGALIAVNLKN 444
>gi|217272867 solute carrier family 26, member 9 isoform b [Homo
sapiens]
Length = 887
Score = 30.4 bits (67), Expect = 5.1
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 19/134 (14%)
Query: 385 FPTPLRPFVTREVLVETYEESVPVSSY-----------QQAGIPVDLKRKIARLGINMLL 433
FPTP+ P V++ + S+ + SY + G VD +++ LG +
Sbjct: 319 FPTPVSPVVSQWKDMIGTAFSLAIVSYVINLAMGRTLANKHGYDVDSNQEMIALGCSNFF 378
Query: 434 KMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAVPSSLCPLRLVLLD 493
F + + L + V GA G S Q A +C +LVV + + + L L
Sbjct: 379 GSFFKIHVICCALSV-TLAVDGAGGKS-------QVASLCVSLVVMITMLVLGIYLYPLP 430
Query: 494 AGIVAELQAPDLRN 507
++ L A +L+N
Sbjct: 431 KSVLGALIAVNLKN 444
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 30.0 bits (66), Expect = 6.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 201 ENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPPFSHTGAVGGLRELFGYLGNG 260
E + P + QVY +A E + V S +P F+HT V GL F +
Sbjct: 903 EEKVPPITSTEGQVYATMEGSALGEVEDVDLSKPVSTVPQFAHTSEVEGL--AFVSYSST 960
Query: 261 RKPPENLADQSFLERLLLPKAD 282
++P + + ++PK D
Sbjct: 961 QEPTTYVDSSHTIPLSVIPKTD 982
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 29.6 bits (65), Expect = 8.7
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 39 LCWLL-LGTLPKVVSLCGDVGEGAPDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHL 97
+ W L L L V+S D G G P+V+S G AG P G LH+
Sbjct: 1 MVWCLGLAVLSLVISQGAD-GRGKPEVVS-----VVGRAGESVVLGCDLLPPAGRPPLHV 54
Query: 98 RLWLRAGALLVKFFPLLLLYP 118
WLR G LL F L P
Sbjct: 55 IEWLRFGFLLPIFIQFGLYSP 75
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 29.6 bits (65), Expect = 8.7
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 39 LCWLL-LGTLPKVVSLCGDVGEGAPDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHL 97
+ W L L L V+S D G G P+V+S G AG P G LH+
Sbjct: 1 MVWCLGLAVLSLVISQGAD-GRGKPEVVS-----VVGRAGESVVLGCDLLPPAGRPPLHV 54
Query: 98 RLWLRAGALLVKFFPLLLLYP 118
WLR G LL F L P
Sbjct: 55 IEWLRFGFLLPIFIQFGLYSP 75
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,561,035
Number of Sequences: 37866
Number of extensions: 1052602
Number of successful extensions: 2676
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2661
Number of HSP's gapped (non-prelim): 25
length of query: 626
length of database: 18,247,518
effective HSP length: 108
effective length of query: 518
effective length of database: 14,157,990
effective search space: 7333838820
effective search space used: 7333838820
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.