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Search of human proteins with 31542547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542547 dullard homolog [Homo sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219555649 dullard homolog [Homo sapiens] 492 e-139
gi|31542547 dullard homolog [Homo sapiens] 492 e-139
gi|56549683 small CTD phosphatase 3 isoform 1 [Homo sapiens] 148 4e-36
gi|56549681 small CTD phosphatase 3 isoform 2 [Homo sapiens] 147 6e-36
gi|10864009 CTD (carboxy-terminal domain, RNA polymerase II, pol... 140 8e-34
gi|32813443 CTD (carboxy-terminal domain, RNA polymerase II, pol... 140 8e-34
gi|93004102 nuclear LIM interactor-interacting factor 2 [Homo sa... 136 2e-32
gi|100815975 CTD (carboxy-terminal domain, RNA polymerase II, po... 123 2e-28
gi|48526509 translocase of inner mitochondrial membrane 50 homol... 63 3e-10
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 47 1e-05
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 47 1e-05
gi|188595687 gamma filamin isoform b [Homo sapiens] 33 0.30
gi|116805322 gamma filamin isoform a [Homo sapiens] 33 0.30
gi|6005846 twinfilin-like protein [Homo sapiens] 31 0.86
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 31 1.1
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun... 28 5.6
gi|55749804 aminopeptidase Fxna [Homo sapiens] 28 7.3
>gi|219555649 dullard homolog [Homo sapiens]
Length = 244
Score = 492 bits (1266), Expect = e-139
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK 60
MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK
Sbjct: 1 MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK 60
Query: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV
Sbjct: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
Query: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS
Sbjct: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
Query: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ 240
SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ
Sbjct: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ 240
Query: 241 HRLW 244
HRLW
Sbjct: 241 HRLW 244
>gi|31542547 dullard homolog [Homo sapiens]
Length = 244
Score = 492 bits (1266), Expect = e-139
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK 60
MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK
Sbjct: 1 MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVK 60
Query: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV
Sbjct: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
Query: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS
Sbjct: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
Query: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ 240
SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ
Sbjct: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQ 240
Query: 241 HRLW 244
HRLW
Sbjct: 241 HRLW 244
>gi|56549683 small CTD phosphatase 3 isoform 1 [Homo sapiens]
Length = 276
Score = 148 bits (374), Expect = 4e-36
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 15/198 (7%)
Query: 45 ILPL-SPVSRNRLAQVK-----RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVV 98
++P+ SP ++ L +V +K +V+DLDETL+HS + +P + DFI+ V
Sbjct: 84 VIPIPSPPAKYLLPEVTVLDYGKKCVVIDLDETLVHS--------SFKPISNADFIVPVE 135
Query: 99 IDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYR 158
ID + +V KRPHVD FL+ + Q +E V+FTAS+ Y VAD LD + + R +R
Sbjct: 136 IDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRW-GVFRARLFR 194
Query: 159 QHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLL 218
+ C G+Y+KDLS + +LS ++I+DNSP +Y HP+NA+P++SWF D +DT LL+L+
Sbjct: 195 ESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLI 254
Query: 219 PMLDALRFTADVRSVLSR 236
P + L DV S+L R
Sbjct: 255 PFFEGLSREDDVYSMLHR 272
>gi|56549681 small CTD phosphatase 3 isoform 2 [Homo sapiens]
Length = 265
Score = 147 bits (372), Expect = 6e-36
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 9/176 (5%)
Query: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
+K +V+DLDETL+HS + +P + DFI+ V ID + +V KRPHVD FL+
Sbjct: 95 KKCVVIDLDETLVHS--------SFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQR 146
Query: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
+ Q +E V+FTAS+ Y VAD LD + + R +R+ C G+Y+KDLS + +LS
Sbjct: 147 MGQLFECVLFTASLAKYADPVADLLDRW-GVFRARLFRESCVFHRGNYVKDLSRLGRELS 205
Query: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
++I+DNSP +Y HP+NA+P++SWF D +DT LL+L+P + L DV S+L R
Sbjct: 206 KVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHR 261
>gi|10864009 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) small phosphatase 1 isoform 1 [Homo
sapiens]
Length = 261
Score = 140 bits (354), Expect = 8e-34
Identities = 81/179 (45%), Positives = 110/179 (61%), Gaps = 10/179 (5%)
Query: 57 AQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVD 115
AQ KI +V+DLDETL+HS + +P DFI+ V ID + +V KRPHVD
Sbjct: 85 AQDSDKICVVIDLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVD 136
Query: 116 FFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVV 175
FL+ + + +E V+FTAS+ Y VAD LD + + R +R+ C G+Y+KDLS +
Sbjct: 137 EFLQRMGELFECVLFTASLAKYADPVADLLDKWGAF-RARLFRESCVFHRGNYVKDLSRL 195
Query: 176 HSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVL 234
DL ++ILDNSP +Y HPDNA+P+ SWF + SDT L +LLP + L DV SVL
Sbjct: 196 GRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVL 254
>gi|32813443 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) small phosphatase 1 isoform 2 [Homo
sapiens]
Length = 260
Score = 140 bits (354), Expect = 8e-34
Identities = 81/179 (45%), Positives = 110/179 (61%), Gaps = 10/179 (5%)
Query: 57 AQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVD 115
AQ KI +V+DLDETL+HS + +P DFI+ V ID + +V KRPHVD
Sbjct: 84 AQDSDKICVVIDLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVD 135
Query: 116 FFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVV 175
FL+ + + +E V+FTAS+ Y VAD LD + + R +R+ C G+Y+KDLS +
Sbjct: 136 EFLQRMGELFECVLFTASLAKYADPVADLLDKWGAF-RARLFRESCVFHRGNYVKDLSRL 194
Query: 176 HSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVL 234
DL ++ILDNSP +Y HPDNA+P+ SWF + SDT L +LLP + L DV SVL
Sbjct: 195 GRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVL 253
>gi|93004102 nuclear LIM interactor-interacting factor 2 [Homo
sapiens]
Length = 271
Score = 136 bits (342), Expect = 2e-32
Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 9/176 (5%)
Query: 61 RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEV 120
R +V+DLDETL+HS + +P DFI+ + I+ + +V KRP+VD FL
Sbjct: 101 RICVVIDLDETLVHS--------SFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRR 152
Query: 121 VSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLS 180
+ + +E V+FTAS+ Y V D LD + + R +R+ C G Y+KDLS + DL
Sbjct: 153 MGELFECVLFTASLAKYADPVTDLLDRC-GVFRARLFRESCVFHQGCYVKDLSRLGRDLR 211
Query: 181 SIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
+ILDNSP +Y HP+NA+P++SWF D +DT LLNL+P+ + L DV + L +
Sbjct: 212 KTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDVYTSLGQ 267
>gi|100815975 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) small phosphatase like 2 [Homo sapiens]
Length = 466
Score = 123 bits (308), Expect = 2e-28
Identities = 79/226 (34%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 21 WSFFI-YLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVKRKILVLDLDETLIHSHHDG 79
W F Y + + + + Q R LPL S + LVLDLDETL+H +
Sbjct: 252 WEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFS------LVLDLDETLVHCSLNE 305
Query: 80 VLRPTVR-PGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYG 138
+ + P D I +V +V RP FLE +SQ YE+++FTAS ++Y
Sbjct: 306 LEDAALTFPVLFQDVIYQV---------YVRLRPFFREFLERMSQMYEIILFTASKKVYA 356
Query: 139 SAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDN 198
+ + LD + +++ R +R+HC G+YIKDL+++ DLS +I+DNSP A+ N
Sbjct: 357 DKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSN 416
Query: 199 AIPIKSWFSDPSDTALLNLLPMLDAL-RFTADVRSVLSRNLHQHRL 243
IPI+SWF D +D LL L+P L+ L DVR + H L
Sbjct: 417 GIPIESWFMDKNDNELLKLIPFLEKLVELNEDVRPHIRDRFRLHDL 462
>gi|48526509 translocase of inner mitochondrial membrane 50 homolog
[Homo sapiens]
Length = 456
Score = 62.8 bits (151), Expect = 3e-10
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 110 KRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYI 169
KRP ++ + ++ YE+V+FT+ + + D +D + R +R G ++
Sbjct: 276 KRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVD-PHGFISYRLFRDATRYMDGHHV 334
Query: 170 KDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLD--ALRFT 227
KD+S ++ D + +V++D A+R P N + ++ W + D LL+L L AL
Sbjct: 335 KDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGV 394
Query: 228 ADVRSVL 234
DVR+VL
Sbjct: 395 EDVRTVL 401
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 47.4 bits (111), Expect = 1e-05
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 53 RNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
+ RL + ++ +L++DLD+TLIH+ + + + I + + RP
Sbjct: 174 QQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKG------IFHFQLGRGEPMLHTRLRP 227
Query: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYY-RQHCTLELGSYIKD 171
H FLE +++ YEL VFT +Y +A LD + + R R C
Sbjct: 228 HCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNL 287
Query: 172 LSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
++ S + I+D+ ++ P N I +K +
Sbjct: 288 RNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKY 320
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 47.4 bits (111), Expect = 1e-05
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 53 RNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
+ RL + ++ +L++DLD+TLIH+ + + + I + + RP
Sbjct: 174 QQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKG------IFHFQLGRGEPMLHTRLRP 227
Query: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYY-RQHCTLELGSYIKD 171
H FLE +++ YEL VFT +Y +A LD + + R R C
Sbjct: 228 HCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNL 287
Query: 172 LSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
++ S + I+D+ ++ P N I +K +
Sbjct: 288 RNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKY 320
>gi|188595687 gamma filamin isoform b [Homo sapiens]
Length = 2692
Score = 32.7 bits (73), Expect = 0.30
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 70 ETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF---VHKRPHVD 115
E LIH++ DG T P P + + + HPV F VH +P VD
Sbjct: 1201 EVLIHNNADGTYHITYSPAFPGTYTITIKYGGHPVPKFPTRVHVQPAVD 1249
>gi|116805322 gamma filamin isoform a [Homo sapiens]
Length = 2725
Score = 32.7 bits (73), Expect = 0.30
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 70 ETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF---VHKRPHVD 115
E LIH++ DG T P P + + + HPV F VH +P VD
Sbjct: 1201 EVLIHNNADGTYHITYSPAFPGTYTITIKYGGHPVPKFPTRVHVQPAVD 1249
>gi|6005846 twinfilin-like protein [Homo sapiens]
Length = 349
Score = 31.2 bits (69), Expect = 0.86
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 15/128 (11%)
Query: 28 LRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVKRKI-----LVLDLDETLIHSHHDGVLR 82
++ +I ++QT++ PL P ++ L Q+K+K+ + LDL+ I H
Sbjct: 162 VKTEISVESKHQTLQGLAFPLQPEAQRALQQLKQKMVNYIQMKLDLERETIELVH----- 216
Query: 83 PTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASME---IYGS 139
P +V D FF++K H LE V Y + + S++ +Y S
Sbjct: 217 --TEPTDVAQLPSRVPRDAARYHFFLYKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSS 274
Query: 140 AVADKLDN 147
+ LD+
Sbjct: 275 CKSRLLDS 282
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 30.8 bits (68), Expect = 1.1
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 67 DLDETLIHSHHDGVLRP--TVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQW 124
DL + D + +P +VR P FI+++++D ++F ++D FL V
Sbjct: 374 DLTLVSMQDFTDLIAQPPDSVRAFEHPGFIMRLILDNDTIKFEPELSDYIDIFLNVYDVM 433
Query: 125 YELVVFTASME 135
+ V F +E
Sbjct: 434 IKAVSFVPRVE 444
>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
[Homo sapiens]
Length = 1137
Score = 28.5 bits (62), Expect = 5.6
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 12/144 (8%)
Query: 104 VRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDN------SRSILKRRYY 157
+RF K P ++ E+V + V TA ME Y +A+A + + L R
Sbjct: 706 IRFLTRKDPDLECDEELVREVLFDAVVTAPMEAYWTALALNMSEESEHVVDMAFLGTRAG 765
Query: 158 RQHCTLELGS-YIKDLS-VVHSDLSSIVILDNSPGAYR---SHPDNAIPIK-SWFSDPSD 211
+L +GS + D + D +S+ LD P YR HP + W P
Sbjct: 766 LLRSSLFVGSEKVSDRKFLTPEDEASVFTLDRFPLWYRQASEHPAGSFVFNLRWAEGPES 825
Query: 212 TALLNLLPMLDALRFTADVRSVLS 235
++ A+ T D R+ ++
Sbjct: 826 AGEPMVVTASTAVAVTVDKRTAIA 849
>gi|55749804 aminopeptidase Fxna [Homo sapiens]
Length = 904
Score = 28.1 bits (61), Expect = 7.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 117 FLEVVSQ---WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLS 173
F+ ++ Q WY F S+ +YG+A K+ ++ KR YY LG D+S
Sbjct: 474 FISLIGQSLSWYNH--FYVSVCLYGTATVAKIILIHTLAKRFYYMNASAQYLGEVFFDIS 531
Query: 174 V 174
+
Sbjct: 532 L 532
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,884,160
Number of Sequences: 37866
Number of extensions: 359338
Number of successful extensions: 1013
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 19
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.