Search of human proteins with 30039704

Search of human proteins with 30039704

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]
         (220 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]         460   e-130
gi|5031865 lipoma HMGIC fusion partner [Homo sapiens]                 283   6e-77
gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]          89   3e-18
gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]          74   1e-13
gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens]          68   5e-12
gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens]          62   4e-10
gi|48717249 transmembrane protein 211 [Homo sapiens]                   41   7e-04
gi|134304856 solute carrier family 6, member 7 [Homo sapiens]          30   1.6  
gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1 ...    29   2.8  
gi|23463303 purinergic receptor P2Y11 [Homo sapiens]                   29   2.8  
gi|99028871 PPAN-P2RY11 protein [Homo sapiens]                         29   2.8  
gi|4502515 carbonic anhydrase XII isoform 1 precursor [Homo sapi...    28   6.1  
gi|4557237 acetyl-Coenzyme A acetyltransferase 1 precursor [Homo...    28   8.0  

>gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]
          Length = 220

 Score =  460 bits (1183), Expect = e-130
 Identities = 220/220 (100%), Positives = 220/220 (100%)

Query: 1   MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVSFSTFRRCNYPVRGEGHS 60
           MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVSFSTFRRCNYPVRGEGHS
Sbjct: 1   MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVSFSTFRRCNYPVRGEGHS 60

Query: 61  LIMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCM 120
           LIMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCM
Sbjct: 61  LIMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCM 120

Query: 121 GAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAAM 180
           GAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAAM
Sbjct: 121 GAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAAM 180

Query: 181 LICTWLSCFAGRNPKPVILVESIMRNTNSYAMELDHCLKP 220
           LICTWLSCFAGRNPKPVILVESIMRNTNSYAMELDHCLKP
Sbjct: 181 LICTWLSCFAGRNPKPVILVESIMRNTNSYAMELDHCLKP 220


>gi|5031865 lipoma HMGIC fusion partner [Homo sapiens]
          Length = 200

 Score =  283 bits (725), Expect = 6e-77
 Identities = 125/196 (63%), Positives = 151/196 (77%), Gaps = 1/196 (0%)

Query: 1   MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVSFSTFRRCNYPVRGEGHS 60
           M SSLT  G +WA LS + A TS   +F+PYWL+GSQ+GKPVSF TFRRC+YPV  E   
Sbjct: 1   MASSLTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVSFGTFRRCSYPVHDESRQ 60

Query: 61  L-IMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRC 119
           + +MVEECGRYASF  IPS  W++CT+VTG GC LLLLVAL A++GCC+ +LISR +GR 
Sbjct: 61  MMVMVEECGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTALMGCCVSDLISRTVGRV 120

Query: 120 MGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAA 179
            G  QF+GGLLI +GCALYPLGW+S E+ QTCG  S QF LG C +GWAYYC G GA AA
Sbjct: 121 AGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGKCEIGWAYYCTGAGATAA 180

Query: 180 MLICTWLSCFAGRNPK 195
           ML+CTWL+CF+G+  K
Sbjct: 181 MLLCTWLACFSGKKQK 196


>gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
          Length = 228

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 22/204 (10%)

Query: 5   LTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQM------------GKPVSF----STFR 48
           +T    LW  LS+V A     ++    WL G               G P  +      + 
Sbjct: 6   VTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYA 65

Query: 49  RCNYPVRGEGHSLIMVEE-CGRYA-SFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGC 106
           RC   +R  G      +  CG YA SF  I S  WQ   +    G  +L +VAL +V   
Sbjct: 66  RC---IRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTM 122

Query: 107 CMEELISRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLG 166
           C++ ++ + +    G  Q + GL +  G  LYP GW   + +  CG+ ++ ++ G C LG
Sbjct: 123 CVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLG 182

Query: 167 WAYYCAGGGAAAAMLICTWLSCFA 190
           WA+Y A GG      IC   S  A
Sbjct: 183 WAFYTAIGGTVLT-FICAVFSAQA 205


>gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]
          Length = 247

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 20/226 (8%)

Query: 1   MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGS-QMGKPVSFSTFRRCNYPVRGEGH 59
           MR+S   +G LWA  ++  A+ +   +  PYW+  S    KP  F  F  C     G G 
Sbjct: 16  MRNSRA-IGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCV----GSGL 70

Query: 60  SLIMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGC--CMEELI---SR 114
           +   +   G +  F+ IPS A++          A  +L+++  +LGC  C        + 
Sbjct: 71  AGRELTCRGSFTDFSTIPSSAFK--------AAAFFVLLSMVLILGCITCFSLFFFCNTA 122

Query: 115 MMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGG 174
            + +     Q +  L +  GC ++P GW++  I   CG  + ++ LG C + WAY  A  
Sbjct: 123 TVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAII 182

Query: 175 GAAAAMLICTWLSCFAGRNPKPVILVESIMRNTNSYAMELDHCLKP 220
           G   A LI ++L+   G     ++  E    N +     +   L+P
Sbjct: 183 GILNA-LILSFLAFVLGNRQTDLLQEELKPENKDFVGSTVSSVLRP 227


>gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens]
          Length = 236

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 11/177 (6%)

Query: 8   VGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVS--FSTFRRCNYPVRGEGHSLIMVE 65
           +G LWA  ++  A+ +   +  PYW+ G  +  P +  F  F  C     G G S  +  
Sbjct: 36  IGVLWAIFTICFAIVNVVCFIQPYWI-GDGVDTPQAGYFGLFHYCI----GNGFSRELTC 90

Query: 66  ECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCMGAAQF 125
             G +  F+ +PS A++  +   G    L++   +   L        +  + +     Q 
Sbjct: 91  R-GSFTDFSTLPSGAFKAASFFIGLSMMLIIACIICFTLFFFCN---TATVYKICAWMQL 146

Query: 126 VGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAAMLI 182
                +  GC ++P GW+S E+ + CG  ++++ LG C + WAY  A  G   A+++
Sbjct: 147 TSAACLVLGCMIFPDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILAIIGILDALIL 203


>gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens]
          Length = 219

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 8   VGTLWAFLSLVTAVTSSTSYFLPYWLFGSQMGKPVS--FSTFRRCNYPVRGEGHSLIMVE 65
           VG +W  L++  +V     +  PYW+ G  +  P +  F  F  C       G+ L    
Sbjct: 25  VGVMWGTLTICFSVLVMALFIQPYWI-GDSVNTPQAGYFGLFSYC------VGNVLSSEL 77

Query: 66  EC-GRYASFNAIPSLAWQMCTVVTGAGCALLL-LVALAAVLGCCMEELISRMMGRCMGAA 123
            C G    F++IPS A++        G  L++  +   ++   C    + ++      AA
Sbjct: 78  ICKGGPLDFSSIPSRAFKTAMFFVALGMFLIIGSIICFSLFFICNTATVYKICAWMQLAA 137

Query: 124 QFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCA 172
               GL+I  GC +YP GW+S E+ + CG  + ++ LG C + WA+  A
Sbjct: 138 --ATGLMI--GCLVYPDGWDSSEVRRMCGEQTGKYTLGHCTIRWAFMLA 182


>gi|48717249 transmembrane protein 211 [Homo sapiens]
          Length = 129

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 93  ALLLLVALAAVLGCCMEELISRMMG-RCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTC 151
           A+ LL    A  G C       M G + + A   + GLLI      +P+G  SP I + C
Sbjct: 13  AIFLLSWAVAPKGLCPRRSSVPMPGVQAVAATAMIVGLLI------FPIGLASPFIKEVC 66

Query: 152 GNVSNQFQLGTCRLGWAYYCAGGGAAAAMLI 182
              S+ +  G CRLGW Y  A   A  A L+
Sbjct: 67  -EASSMYYGGKCRLGWGYMTAILNAVLASLL 96


>gi|134304856 solute carrier family 6, member 7 [Homo sapiens]
          Length = 636

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 23/97 (23%)

Query: 8   VGTLWAFLSLVTAVTSSTSYFL-PYWLFGSQMGKPVSFSTFRRCNYPVRGEGHSLIMVEE 66
           +G +W F     A T+    FL PY+L  +  G P+ F                      
Sbjct: 57  LGNVWRFP--YRAYTNGGGAFLVPYFLMLAICGIPLFFLEL------------------S 96

Query: 67  CGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAV 103
            G+++S    P   W++  +  GAG A+LL+V L A+
Sbjct: 97  LGQFSSLG--PLAVWKISPLFKGAGAAMLLIVGLVAI 131


>gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1
           [Homo sapiens]
          Length = 925

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 78  SLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCMGAAQFVGGLLISSGCAL 137
           SL   +C + T  GC   L  + A  +  C      R  G C   A  V    + + C  
Sbjct: 79  SLVLSVCVLTTILGCIFGLKPSCAKEVKSCKGRCFERTFGNCRCDAACVE---LGNCCLD 135

Query: 138 YPLGWNSPEIMQTCGNVSNQFQLGTCRL 165
           Y      PE + TC    N+F+ G  RL
Sbjct: 136 YQETCIEPEHIWTC----NKFRCGEKRL 159


>gi|23463303 purinergic receptor P2Y11 [Homo sapiens]
          Length = 374

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 13/123 (10%)

Query: 32  WLFGSQMGKP-VSFSTFRRCNYPVRGEGHSLIMVEE----CGRYASFNAIPSLAWQMCTV 86
           W+  + +  P +SFS  +R   P +G G+  +   E    C   A        A+ +  V
Sbjct: 154 WVLAALLAMPTLSFSHLKR---PQQGAGNCSVARPEACIKCLGTADHGLAAYRAYSL--V 208

Query: 87  VTGAGCALLLLVALAAVLGCCMEELISRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPE 146
           + G GC L LL+ LAA     +   + R  G  + A +     L++SG ALY   +    
Sbjct: 209 LAGLGCGLPLLLTLAAY--GALGRAVLRSPGMTV-AEKLRVAALVASGVALYASSYVPYH 265

Query: 147 IMQ 149
           IM+
Sbjct: 266 IMR 268


>gi|99028871 PPAN-P2RY11 protein [Homo sapiens]
          Length = 794

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 13/123 (10%)

Query: 32  WLFGSQMGKP-VSFSTFRRCNYPVRGEGHSLIMVEE----CGRYASFNAIPSLAWQMCTV 86
           W+  + +  P +SFS  +R   P +G G+  +   E    C   A        A+ +  V
Sbjct: 574 WVLAALLAMPTLSFSHLKR---PQQGAGNCSVARPEACIKCLGTADHGLAAYRAYSL--V 628

Query: 87  VTGAGCALLLLVALAAVLGCCMEELISRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPE 146
           + G GC L LL+ LAA     +   + R  G  + A +     L++SG ALY   +    
Sbjct: 629 LAGLGCGLPLLLTLAAY--GALGRAVLRSPGMTV-AEKLRVAALVASGVALYASSYVPYH 685

Query: 147 IMQ 149
           IM+
Sbjct: 686 IMR 688


>gi|4502515 carbonic anhydrase XII isoform 1 precursor [Homo
           sapiens]
          Length = 354

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 6/44 (13%)

Query: 70  YASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELIS 113
           Y SF+ +     Q+CT   G    ++L +ALA +LG C+  ++S
Sbjct: 286 YTSFSQV-----QVCTAA-GLSLGIILSLALAGILGICIVVVVS 323


>gi|4557237 acetyl-Coenzyme A acetyltransferase 1 precursor [Homo
           sapiens]
          Length = 427

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 126 VGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGGGAAAAMLI 182
           + G  +S G   +P+G +   I+   G++++  + G    G A  C GGG A+AMLI
Sbjct: 376 INGGAVSLG---HPIGMSGARIV---GHLTHALKQG--EYGLASICNGGGGASAMLI 424


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.137    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,236,160
Number of Sequences: 37866
Number of extensions: 342061
Number of successful extensions: 845
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 13
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.