Guide to the Human Genome
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Name: A3GALT2 Sequence: fasta or formatted (340aa) NCBI GI: 122937275
Description:

alpha 1,3-galactosyltransferase 2

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         38           3
 C cysteine            1.5          5           1
 D aspartate           3.8         13           1
 E glutamate           5.6         19           1
 F phenylalanine       5.6         19           2
 G glycine             8.5         29           2
 H histidine           4.1         14           1
 I isoleucine          2.6          9           2
 K lysine              2.6          9           1
 L leucine            12.1         41           2
 M methionine          2.9         10           1
 N asparagine          1.5          5           1
 P proline             6.5         22           1
 Q glutamine           3.2         11           2
 R arginine            9.1         31           2
 S serine              4.1         14           1
 T threonine           3.5         12           1
 V valine              4.7         16           1
 W tryptophan          4.4         15           1
 Y tyrosine            2.4          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha 1,3-galactosyltransferase 2 
ABO                   0.293   ABO blood group (alpha 1-3-N-acetylgalactosaminyltra...
GBGT1                 0.269   globoside alpha-1,3-N-acetylgalactosaminyltransferas...
GLT6D1                0.207   glycosyltransferase 6 domain containing 1 
MRC2                  0.006   mannose receptor, C type 2 
PIGV                  0.006   phosphatidylinositol glycan class V 
HIAT1                 0.006   hippocampus abundant transcript 1 
XKR8                  0.006   XK, Kell blood group complex subunit-related family,...
MYO3B                 0.004   myosin IIIB isoform 1 
MYO3B                 0.004   myosin IIIB isoform 2 
RABEPK                0.004   Rab9 effector protein with kelch motifs 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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