GBGT1 25889

Name: GBGT1	Sequence: fasta or formatted (347aa)		NCBI GI: 32484985
Description: globoside alpha-1,3-N-acetylgalactosaminyltransferase 1		Referenced in: Sphingomyelin, Ceramides, and Glycolipids Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 21 2 C cysteine 1.4 5 1 D aspartate 3.5 12 2 E glutamate 5.8 20 2 F phenylalanine 5.2 18 2 G glycine 5.5 19 2 H histidine 4.3 15 1 I isoleucine 4.6 16 1 K lysine 3.5 12 1 L leucine 11.0 38 2 M methionine 2.3 8 1 N asparagine 2.6 9 1 P proline 8.1 28 2 Q glutamine 3.7 13 2 R arginine 6.9 24 3 S serine 6.6 23 2 T threonine 4.3 15 1 V valine 6.9 24 2 W tryptophan 2.3 8 1 Y tyrosine 5.5 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 globoside alpha-1,3-N-acetylgalactosaminyltransferas... ABO 0.380 ABO blood group (alpha 1-3-N-acetylgalactosaminyltra... A3GALT2 0.266 alpha 1,3-galactosyltransferase 2 GLT6D1 0.206 glycosyltransferase 6 domain containing 1 INPP4A 0.007 inositol polyphosphate-4-phosphatase, type 1 isofor... INPP4A 0.007 inositol polyphosphate-4-phosphatase, type 1 isofor... INPP4A 0.007 inositol polyphosphate-4-phosphatase, type 1 isoform ... INPP4A 0.007 inositol polyphosphate-4-phosphatase, type 1 isoform ... LAMB2 0.007 laminin, beta 2 precursor ELF4 0.006 E74-like factor 4 ELF4 0.006 E74-like factor 4 LAMB1 0.004 laminin, beta 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.