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Search of human proteins with 29336077
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens]
(457 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] 912 0.0
gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] 808 0.0
gi|45580709 unc-93 homolog B1 [Homo sapiens] 120 3e-27
gi|13236549 major facilitator superfamily domain containing 11 [... 86 7e-17
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 59 7e-09
gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 47 4e-05
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 47 4e-05
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 45 1e-04
gi|22749525 major facilitator superfamily domain containing 8 [H... 34 0.32
gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens] 31 2.0
gi|12232393 major facilitator superfamily domain containing 1 [H... 31 2.0
gi|4502455 bombesin-like receptor 3 [Homo sapiens] 31 2.0
gi|144953907 major facilitator superfamily domain containing 6 [... 31 2.7
gi|5902148 uroplakin 1A [Homo sapiens] 29 7.8
>gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens]
Length = 457
Score = 912 bits (2357), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60
MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL
Sbjct: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60
Query: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120
LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN
Sbjct: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120
Query: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180
THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS
Sbjct: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180
Query: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240
DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP
Sbjct: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240
Query: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300
FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS
Sbjct: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300
Query: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360
ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA
Sbjct: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360
Query: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420
DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL
Sbjct: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420
Query: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457
TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM
Sbjct: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457
>gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens]
Length = 415
Score = 808 bits (2088), Expect = 0.0
Identities = 415/457 (90%), Positives = 415/457 (90%), Gaps = 42/457 (9%)
Query: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60
MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL
Sbjct: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60
Query: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120
LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN
Sbjct: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120
Query: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180
THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQ
Sbjct: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQ-------------- 166
Query: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240
GSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP
Sbjct: 167 ----------------------------GSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 198
Query: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300
FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS
Sbjct: 199 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 258
Query: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360
ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA
Sbjct: 259 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 318
Query: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420
DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL
Sbjct: 319 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 378
Query: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457
TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM
Sbjct: 379 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 415
>gi|45580709 unc-93 homolog B1 [Homo sapiens]
Length = 597
Score = 120 bits (301), Expect = 3e-27
Identities = 115/461 (24%), Positives = 192/461 (41%), Gaps = 50/461 (10%)
Query: 5 LRNVLVVSFGFLLLFTAYGGLQSLQSSL-----YSEEGLGVTALSTLYGGMLL------- 52
L+NVL S G +L + Y GL +Q L Y E G L + ML+
Sbjct: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120
Query: 53 SSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQC 112
+++ P+LI G K + L++ Y F N++ +YTL+P+++ LG+ PLW++
Sbjct: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180
Query: 113 TYLTITGNTHAEKAGKRGKDMVNQ---------------YFGIFFLIFQSSGVWGNL--I 155
Y+T + E + + +D + IF+ F S L I
Sbjct: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240
Query: 156 SSLVFGQTPSQETLPEEQLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAV 215
L TL Q + L T P + + + LA+
Sbjct: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300
Query: 216 LMI----AAFLQPIRDVQRESEGEKKSVPFWSTLLST-FKLYRDKRLCLLILLPLYSGLQ 270
L++ A +P ++ S G W + FK RD RL L+ +YSG +
Sbjct: 301 LLVLGLCGAAYRPTEEIDLRSVG-------WGNIFQLPFKHVRDYRLRHLVPFFIYSGFE 353
Query: 271 QGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTH 330
F + Y C++G++ + Y+++ +S + S+L G + + R V V GA H
Sbjct: 354 VLFACTGIALGYGVCSVGLERLAYLLVAYSLGASAASLL-GLLGLWLPRPVPLVAGAGVH 412
Query: 331 VSCMIALLLWRP---RADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFA 385
+ L W P H + +V + LWGV A+ +T + L G+L+E + ++ F
Sbjct: 413 LLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFT 472
Query: 386 NYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425
Y W+A+ F + G S+ + KL +LL L V+Y
Sbjct: 473 IYHWWQAVAIFTVYLGSSLHM--KAKLAVLLVTLVAAAVSY 511
>gi|13236549 major facilitator superfamily domain containing 11
[Homo sapiens]
Length = 449
Score = 85.9 bits (211), Expect = 7e-17
Identities = 100/445 (22%), Positives = 188/445 (42%), Gaps = 63/445 (14%)
Query: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56
+ L N++++ F+ +FTA+ ++ ++ G G T+++ +YG + +S
Sbjct: 6 KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64
Query: 57 LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113
+ P ++ +G + ++ S Y+A + F S+YT S+ +G+ AA LW+AQ
Sbjct: 65 ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121
Query: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQETLPEE 172
LTI + H+ + + GIF+ + QSS +GNL + G+T
Sbjct: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKT--------- 162
Query: 173 QLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRES 232
Q++ +A T + LV T+L ++ +D++
Sbjct: 163 QISESDRRTVFIALTVIS--------LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNE 214
Query: 233 EGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ- 290
+ +FKL K + LL + Y+GL+ F S Y T T G +
Sbjct: 215 SAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEE 274
Query: 291 --FVGYVMICFSATDALCSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADH 346
+G I + L L+G +S+ GR + +LG + H + L P
Sbjct: 275 KSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAP 334
Query: 347 LA----------------VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLW 390
+A V + S L G+ D+ + TQ ++ G L+ + AFA ++
Sbjct: 335 IAPVKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFV 394
Query: 391 EALGFVIAFGYSMFLCVHVKLYILL 415
+++ +AF YS +L +H +L +++
Sbjct: 395 QSICAAVAFFYSNYLLLHWQLLVMV 419
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 59.3 bits (142), Expect = 7e-09
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 280 RSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLL 339
+ Y C++G++++ Y+++ +S + S+L G + + R V V GA H+ L
Sbjct: 3 QGYGVCSVGLEWLAYLLVPYSLGASATSLL-GLLGLWLPRPVPLVAGAGVHLLLTFILFF 61
Query: 340 WRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFANYRLWEALG 394
W P H + +V + LW V ++ +T + L G+L+E + ++ F Y W+A+
Sbjct: 62 WAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVA 121
Query: 395 -FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425
F + G S+ + KL +LL L V+Y
Sbjct: 122 IFTVYLGSSLHM--KAKLALLLVTLVAATVSY 151
>gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 312
Score = 47.0 bits (110), Expect = 4e-05
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 309 LYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQ 365
L G + + R V V GA H+ L W P H + V + LWGV A+
Sbjct: 12 LLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAALWGVGSALNN 71
Query: 366 TQNNALYGVLF--EKSKEAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTM 422
T + L G+L+ ++ ++ F Y W+A+ F + G S+ + KL +LL L
Sbjct: 72 TGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAA 129
Query: 423 VAY 425
V+Y
Sbjct: 130 VSY 132
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 47.0 bits (110), Expect = 4e-05
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 309 LYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQ 365
L G + + R V V GA H+ L W P H + V + LWGV A+
Sbjct: 12 LLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAALWGVGSALNN 71
Query: 366 TQNNALYGVLF--EKSKEAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTM 422
T + L G+L+ ++ ++ F Y W+A+ F + G S+ + KL +LL L
Sbjct: 72 TGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAA 129
Query: 423 VAY 425
V+Y
Sbjct: 130 VSY 132
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 1e-04
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 326 GAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSK 380
GA H+ L W P H+ + V + LWGV A+ T + L G+L+E + +
Sbjct: 3 GAGVHLLLTFILFFWAPVPRVLQHIWILCVAAALWGVGSALNNTGLSTLLGILYEDKERQ 62
Query: 381 EAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425
+ F Y W+A+ F + G S+ + KL +LL L V+Y
Sbjct: 63 DFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAAVSY 106
>gi|22749525 major facilitator superfamily domain containing 8 [Homo
sapiens]
Length = 518
Score = 33.9 bits (76), Expect = 0.32
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 286 TLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHV--SCMIALLLWRPR 343
T F+G+V+ +S + S ++G S Y R ++ + V +C+ A L P
Sbjct: 70 TADTSFLGWVIASYSLGQMVASPIFGLWSNYRPRKEPLIVSILISVAANCLYA-YLHIPA 128
Query: 344 ADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVI 397
+ + V GL G+ + G + + ++ AN + +ALGF++
Sbjct: 129 SHNKYYMLVARGLLGIGAGNVAVVRSYTAGATSLQERTSSMANISMCQALGFIL 182
>gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens]
Length = 316
Score = 31.2 bits (69), Expect = 2.0
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 22/115 (19%)
Query: 200 VYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFKLYRDKRLC- 258
VYT+L I LAV+ + F P++D + + G +W++ F Y C
Sbjct: 106 VYTILLIQL-LVTLAVVALFTFCDPVKDYVQANPGW-----YWASYAVFFATYLTLACCS 159
Query: 259 -----------LLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSAT 302
LL + L G LSS Y + V LGI ++C S T
Sbjct: 160 GPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGIT----ALVCLSVT 210
>gi|12232393 major facilitator superfamily domain containing 1 [Homo
sapiens]
Length = 465
Score = 31.2 bits (69), Expect = 2.0
Identities = 84/362 (23%), Positives = 145/362 (40%), Gaps = 70/362 (19%)
Query: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSM---FLPP 59
R L +L+ GF F Y +LQ+ + + + T LY ++ F
Sbjct: 42 RLLVLLLMCFLGFGSYF-CYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGG 100
Query: 60 LLIERL-GCK-GTIILS--MC-GYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTY 114
LI+R+ G + GTII S +C G V F++G F +++ + + G+G L AQ TY
Sbjct: 101 FLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTY 160
Query: 115 LTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQL 174
+ +GK++ N FG+ S G+ ++ + G S+ E L
Sbjct: 161 AV---------SWFKGKEL-NLVFGLQL----SMARIGSTVNMNLMGWLYSK---IEALL 203
Query: 175 TSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEG 234
S G TT T + G+ ++ L +A Q + + +G
Sbjct: 204 GSAG-------HTTLGIT--------LMIGGVTCILSLICALALAYLDQRAERILHKEQG 248
Query: 235 EKK-----------SVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYV 283
+ S+P W + +C + + + GL + F + ++ S
Sbjct: 249 KTGEVIKLTDVKDFSLPLWLIFIIC--------VCYYVAVFPFIGLGKVFFTEKFGFSSQ 300
Query: 284 TCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAV--THVS-CMIALLLW 340
+ I V YV+ A S ++G + TG+ +++VL AV T VS M+A +W
Sbjct: 301 AAS-AINSVVYVI------SAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMW 353
Query: 341 RP 342
P
Sbjct: 354 NP 355
>gi|4502455 bombesin-like receptor 3 [Homo sapiens]
Length = 399
Score = 31.2 bits (69), Expect = 2.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 140 IFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGASDCLMATT 187
I + + S G+ GN I VF +T S +T+P +TS D L+ T
Sbjct: 52 ITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLT 99
>gi|144953907 major facilitator superfamily domain containing 6
[Homo sapiens]
Length = 791
Score = 30.8 bits (68), Expect = 2.7
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 11 VSFGFLLLFT-AYGGLQSLQSSLYSEEGLGVTAL----STLYGGMLLSSMFLPPLLIERL 65
+ FG+ +FT Y L+ L G T L S L L++ F LIE +
Sbjct: 457 MGFGYGFVFTFLYWHLEDLN---------GTTTLFGVCSVLSHVSELTAYFFSHKLIELI 507
Query: 66 GCKGTIILSM-CGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLT 116
G + + + C + ++ + +T++P +L G+ A +W+A +YL+
Sbjct: 508 GHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLS 559
>gi|5902148 uroplakin 1A [Homo sapiens]
Length = 258
Score = 29.3 bits (64), Expect = 7.8
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 349 VFFVFSGLWGVADAVWQTQNN-ALYGVLFEKSKEAAFANYRLWEALGF----VIAFGYSM 403
+ + SGL A+ +W T + +Y ++ K+ FA + GF V +FG
Sbjct: 25 IIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGA 84
Query: 404 FLCVHVKLYILLGVLSLTMVAYGLVECVES 433
LC + + VL L + + C+ S
Sbjct: 85 ALCRRRSMVLTYLVLMLIVYIFECASCITS 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,846,971
Number of Sequences: 37866
Number of extensions: 636672
Number of successful extensions: 1805
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1790
Number of HSP's gapped (non-prelim): 18
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.