BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] (457 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] 912 0.0 gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] 808 0.0 gi|45580709 unc-93 homolog B1 [Homo sapiens] 120 3e-27 gi|13236549 major facilitator superfamily domain containing 11 [... 86 7e-17 gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 59 7e-09 gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 47 4e-05 gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 47 4e-05 gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 45 1e-04 gi|22749525 major facilitator superfamily domain containing 8 [H... 34 0.32 gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens] 31 2.0 gi|12232393 major facilitator superfamily domain containing 1 [H... 31 2.0 gi|4502455 bombesin-like receptor 3 [Homo sapiens] 31 2.0 gi|144953907 major facilitator superfamily domain containing 6 [... 31 2.7 gi|5902148 uroplakin 1A [Homo sapiens] 29 7.8 >gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] Length = 457 Score = 912 bits (2357), Expect = 0.0 Identities = 457/457 (100%), Positives = 457/457 (100%) Query: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL Sbjct: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60 Query: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN Sbjct: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120 Query: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS Sbjct: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180 Query: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP Sbjct: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240 Query: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS Sbjct: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300 Query: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA Sbjct: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360 Query: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL Sbjct: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420 Query: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM Sbjct: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457 >gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] Length = 415 Score = 808 bits (2088), Expect = 0.0 Identities = 415/457 (90%), Positives = 415/457 (90%), Gaps = 42/457 (9%) Query: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL Sbjct: 1 MDRSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPL 60 Query: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN Sbjct: 61 LIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGN 120 Query: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGAS 180 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQ Sbjct: 121 THAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQ-------------- 166 Query: 181 DCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 240 GSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP Sbjct: 167 ----------------------------GSGVLAVLMIAAFLQPIRDVQRESEGEKKSVP 198 Query: 241 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 300 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS Sbjct: 199 FWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFS 258 Query: 301 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 360 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA Sbjct: 259 ATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVA 318 Query: 361 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 420 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL Sbjct: 319 DAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSL 378 Query: 421 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 457 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM Sbjct: 379 TMVAYGLVECVESKNPIRPHAPGQVNQAEDEEIQTKM 415 >gi|45580709 unc-93 homolog B1 [Homo sapiens] Length = 597 Score = 120 bits (301), Expect = 3e-27 Identities = 115/461 (24%), Positives = 192/461 (41%), Gaps = 50/461 (10%) Query: 5 LRNVLVVSFGFLLLFTAYGGLQSLQSSL-----YSEEGLGVTALSTLYGGMLL------- 52 L+NVL S G +L + Y GL +Q L Y E G L + ML+ Sbjct: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120 Query: 53 SSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQC 112 +++ P+LI G K + L++ Y F N++ +YTL+P+++ LG+ PLW++ Sbjct: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 Query: 113 TYLTITGNTHAEKAGKRGKDMVNQ---------------YFGIFFLIFQSSGVWGNL--I 155 Y+T + E + + +D + IF+ F S L I Sbjct: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240 Query: 156 SSLVFGQTPSQETLPEEQLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAV 215 L TL Q + L T P + + + LA+ Sbjct: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300 Query: 216 LMI----AAFLQPIRDVQRESEGEKKSVPFWSTLLST-FKLYRDKRLCLLILLPLYSGLQ 270 L++ A +P ++ S G W + FK RD RL L+ +YSG + Sbjct: 301 LLVLGLCGAAYRPTEEIDLRSVG-------WGNIFQLPFKHVRDYRLRHLVPFFIYSGFE 353 Query: 271 QGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTH 330 F + Y C++G++ + Y+++ +S + S+L G + + R V V GA H Sbjct: 354 VLFACTGIALGYGVCSVGLERLAYLLVAYSLGASAASLL-GLLGLWLPRPVPLVAGAGVH 412 Query: 331 VSCMIALLLWRP---RADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFA 385 + L W P H + +V + LWGV A+ +T + L G+L+E + ++ F Sbjct: 413 LLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFT 472 Query: 386 NYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425 Y W+A+ F + G S+ + KL +LL L V+Y Sbjct: 473 IYHWWQAVAIFTVYLGSSLHM--KAKLAVLLVTLVAAAVSY 511 >gi|13236549 major facilitator superfamily domain containing 11 [Homo sapiens] Length = 449 Score = 85.9 bits (211), Expect = 7e-17 Identities = 100/445 (22%), Positives = 188/445 (42%), Gaps = 63/445 (14%) Query: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56 + L N++++ F+ +FTA+ ++ ++ G G T+++ +YG + +S Sbjct: 6 KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64 Query: 57 LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113 + P ++ +G + ++ S Y+A + F S+YT S+ +G+ AA LW+AQ Sbjct: 65 ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121 Query: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQETLPEE 172 LTI + H+ + + GIF+ + QSS +GNL + G+T Sbjct: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKT--------- 162 Query: 173 QLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRES 232 Q++ +A T + LV T+L ++ +D++ Sbjct: 163 QISESDRRTVFIALTVIS--------LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNE 214 Query: 233 EGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ- 290 + +FKL K + LL + Y+GL+ F S Y T T G + Sbjct: 215 SAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEE 274 Query: 291 --FVGYVMICFSATDALCSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADH 346 +G I + L L+G +S+ GR + +LG + H + L P Sbjct: 275 KSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAP 334 Query: 347 LA----------------VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLW 390 +A V + S L G+ D+ + TQ ++ G L+ + AFA ++ Sbjct: 335 IAPVKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFV 394 Query: 391 EALGFVIAFGYSMFLCVHVKLYILL 415 +++ +AF YS +L +H +L +++ Sbjct: 395 QSICAAVAFFYSNYLLLHWQLLVMV 419 >gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo sapiens] Length = 319 Score = 59.3 bits (142), Expect = 7e-09 Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%) Query: 280 RSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLL 339 + Y C++G++++ Y+++ +S + S+L G + + R V V GA H+ L Sbjct: 3 QGYGVCSVGLEWLAYLLVPYSLGASATSLL-GLLGLWLPRPVPLVAGAGVHLLLTFILFF 61 Query: 340 WRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFANYRLWEALG 394 W P H + +V + LW V ++ +T + L G+L+E + ++ F Y W+A+ Sbjct: 62 WAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVA 121 Query: 395 -FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425 F + G S+ + KL +LL L V+Y Sbjct: 122 IFTVYLGSSLHM--KAKLALLLVTLVAATVSY 151 >gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 312 Score = 47.0 bits (110), Expect = 4e-05 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 309 LYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQ 365 L G + + R V V GA H+ L W P H + V + LWGV A+ Sbjct: 12 LLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAALWGVGSALNN 71 Query: 366 TQNNALYGVLF--EKSKEAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTM 422 T + L G+L+ ++ ++ F Y W+A+ F + G S+ + KL +LL L Sbjct: 72 TGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAA 129 Query: 423 VAY 425 V+Y Sbjct: 130 VSY 132 >gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 529 Score = 47.0 bits (110), Expect = 4e-05 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 309 LYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQ 365 L G + + R V V GA H+ L W P H + V + LWGV A+ Sbjct: 12 LLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAALWGVGSALNN 71 Query: 366 TQNNALYGVLF--EKSKEAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTM 422 T + L G+L+ ++ ++ F Y W+A+ F + G S+ + KL +LL L Sbjct: 72 TGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAA 129 Query: 423 VAY 425 V+Y Sbjct: 130 VSY 132 >gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 503 Score = 45.4 bits (106), Expect = 1e-04 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 326 GAVTHVSCMIALLLWRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSK 380 GA H+ L W P H+ + V + LWGV A+ T + L G+L+E + + Sbjct: 3 GAGVHLLLTFILFFWAPVPRVLQHIWILCVAAALWGVGSALNNTGLSTLLGILYEDKERQ 62 Query: 381 EAAFANYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425 + F Y W+A+ F + G S+ + KL +LL L V+Y Sbjct: 63 DFIFTIYHWWQAVAIFTVYLGSSLHM--KAKLAMLLVTLVAAAVSY 106 >gi|22749525 major facilitator superfamily domain containing 8 [Homo sapiens] Length = 518 Score = 33.9 bits (76), Expect = 0.32 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 3/114 (2%) Query: 286 TLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHV--SCMIALLLWRPR 343 T F+G+V+ +S + S ++G S Y R ++ + V +C+ A L P Sbjct: 70 TADTSFLGWVIASYSLGQMVASPIFGLWSNYRPRKEPLIVSILISVAANCLYA-YLHIPA 128 Query: 344 ADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVI 397 + + V GL G+ + G + + ++ AN + +ALGF++ Sbjct: 129 SHNKYYMLVARGLLGIGAGNVAVVRSYTAGATSLQERTSSMANISMCQALGFIL 182 >gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens] Length = 316 Score = 31.2 bits (69), Expect = 2.0 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 22/115 (19%) Query: 200 VYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFKLYRDKRLC- 258 VYT+L I LAV+ + F P++D + + G +W++ F Y C Sbjct: 106 VYTILLIQL-LVTLAVVALFTFCDPVKDYVQANPGW-----YWASYAVFFATYLTLACCS 159 Query: 259 -----------LLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSAT 302 LL + L G LSS Y + V LGI ++C S T Sbjct: 160 GPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGIT----ALVCLSVT 210 >gi|12232393 major facilitator superfamily domain containing 1 [Homo sapiens] Length = 465 Score = 31.2 bits (69), Expect = 2.0 Identities = 84/362 (23%), Positives = 145/362 (40%), Gaps = 70/362 (19%) Query: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSM---FLPP 59 R L +L+ GF F Y +LQ+ + + + T LY ++ F Sbjct: 42 RLLVLLLMCFLGFGSYF-CYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGG 100 Query: 60 LLIERL-GCK-GTIILS--MC-GYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTY 114 LI+R+ G + GTII S +C G V F++G F +++ + + G+G L AQ TY Sbjct: 101 FLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTY 160 Query: 115 LTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQL 174 + +GK++ N FG+ S G+ ++ + G S+ E L Sbjct: 161 AV---------SWFKGKEL-NLVFGLQL----SMARIGSTVNMNLMGWLYSK---IEALL 203 Query: 175 TSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEG 234 S G TT T + G+ ++ L +A Q + + +G Sbjct: 204 GSAG-------HTTLGIT--------LMIGGVTCILSLICALALAYLDQRAERILHKEQG 248 Query: 235 EKK-----------SVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYV 283 + S+P W + +C + + + GL + F + ++ S Sbjct: 249 KTGEVIKLTDVKDFSLPLWLIFIIC--------VCYYVAVFPFIGLGKVFFTEKFGFSSQ 300 Query: 284 TCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAV--THVS-CMIALLLW 340 + I V YV+ A S ++G + TG+ +++VL AV T VS M+A +W Sbjct: 301 AAS-AINSVVYVI------SAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMW 353 Query: 341 RP 342 P Sbjct: 354 NP 355 >gi|4502455 bombesin-like receptor 3 [Homo sapiens] Length = 399 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/48 (35%), Positives = 25/48 (52%) Query: 140 IFFLIFQSSGVWGNLISSLVFGQTPSQETLPEEQLTSCGASDCLMATT 187 I + + S G+ GN I VF +T S +T+P +TS D L+ T Sbjct: 52 ITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLT 99 >gi|144953907 major facilitator superfamily domain containing 6 [Homo sapiens] Length = 791 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 15/112 (13%) Query: 11 VSFGFLLLFT-AYGGLQSLQSSLYSEEGLGVTAL----STLYGGMLLSSMFLPPLLIERL 65 + FG+ +FT Y L+ L G T L S L L++ F LIE + Sbjct: 457 MGFGYGFVFTFLYWHLEDLN---------GTTTLFGVCSVLSHVSELTAYFFSHKLIELI 507 Query: 66 GCKGTIILSM-CGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLT 116 G + + + C + ++ + +T++P +L G+ A +W+A +YL+ Sbjct: 508 GHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLS 559 >gi|5902148 uroplakin 1A [Homo sapiens] Length = 258 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Query: 349 VFFVFSGLWGVADAVWQTQNN-ALYGVLFEKSKEAAFANYRLWEALGF----VIAFGYSM 403 + + SGL A+ +W T + +Y ++ K+ FA + GF V +FG Sbjct: 25 IIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGA 84 Query: 404 FLCVHVKLYILLGVLSLTMVAYGLVECVES 433 LC + + VL L + + C+ S Sbjct: 85 ALCRRRSMVLTYLVLMLIVYIFECASCITS 114 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.325 0.138 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,846,971 Number of Sequences: 37866 Number of extensions: 636672 Number of successful extensions: 1805 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1790 Number of HSP's gapped (non-prelim): 18 length of query: 457 length of database: 18,247,518 effective HSP length: 106 effective length of query: 351 effective length of database: 14,233,722 effective search space: 4996036422 effective search space used: 4996036422 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.