Guide to the Human Genome
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Name: ST3GAL3 Sequence: fasta or formatted (170aa) NCBI GI: 28373072
Description:

sialyltransferase 6 isoform c

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [444aa] sialyltransferase 6 isoform a
alt prot [390aa] sialyltransferase 6 isoform b
alt prot [277aa] sialyltransferase 6 isoform d
alt prot [155aa] sialyltransferase 6 isoform e
alt prot [429aa] sialyltransferase 6 isoform f
alt prot [359aa] sialyltransferase 6 isoform g
alt prot [139aa] sialyltransferase 6 isoform h
alt prot [413aa] sialyltransferase 6 isoform i
alt prot [375aa] sialyltransferase 6 isoform j
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         17           1
 C cysteine            1.2          2           1
 D aspartate           4.7          8           2
 E glutamate           5.9         10           2
 F phenylalanine       7.1         12           1
 G glycine             5.9         10           1
 H histidine           2.4          4           2
 I isoleucine          1.8          3           1
 K lysine              5.3          9           1
 L leucine            14.1         24           3
 M methionine          1.8          3           1
 N asparagine          1.8          3           1
 P proline             5.9         10           2
 Q glutamine           2.9          5           1
 R arginine            5.3          9           1
 S serine             11.2         19           3
 T threonine           1.8          3           1
 V valine              5.3          9           2
 W tryptophan          1.8          3           1
 Y tyrosine            4.1          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialyltransferase 6 isoform c 
ST3GAL3               0.871   sialyltransferase 6 isoform e 
ST3GAL3               0.859   sialyltransferase 6 isoform b 
ST3GAL3               0.762   sialyltransferase 6 isoform a 
ST3GAL3               0.762   sialyltransferase 6 isoform h 
ST3GAL3               0.730   sialyltransferase 6 isoform d 
ST3GAL3               0.730   sialyltransferase 6 isoform j 
ST3GAL3               0.621   sialyltransferase 6 isoform g 
ST3GAL3               0.530   sialyltransferase 6 isoform i 
ST3GAL3               0.514   sialyltransferase 6 isoform f 
MUC5AC                0.016   mucin 5AC 
LOC100132635          0.016   PREDICTED: similar to mucin 5, partial 
ANGEL1                0.009   angel homolog 1 
SPAG1                 0.009   sperm associated antigen 1 
SPAG1                 0.009   sperm associated antigen 1 
ARID3A                0.006   AT rich interactive domain 3A (BRIGHT- like) protein ...
SLC6A4                0.006   solute carrier family 6 member 4 
DPEP3                 0.006   dipeptidase 3 isoform b 
DPEP3                 0.006   dipeptidase 3 isoform a 
RND2                  0.006   Rho family GTPase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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