Search of human proteins with 27734925

Search of human proteins with 27734925

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27734925 hypothetical protein LOC285315 [Homo sapiens]
         (251 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27734925 hypothetical protein LOC285315 [Homo sapiens]             499   e-141
gi|24497438 interleukin 12B precursor [Homo sapiens]                   32   0.40 
gi|21396489 mitochondrial lon peptidase 1 [Homo sapiens]               30   1.5  
gi|115527120 nebulin [Homo sapiens]                                    30   1.5  
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik...    29   3.4  
gi|157427659 coiled-coil domain containing 70 precursor [Homo sa...    29   3.4  
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    28   5.8  
gi|19923959 serine dehydratase-like [Homo sapiens]                     28   5.8  
gi|82617626 paralemmin 2 isoform b [Homo sapiens]                      28   7.6  
gi|82524851 paralemmin 2 isoform a [Homo sapiens]                      28   7.6  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               28   7.6  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                28   7.6  
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa...    28   9.9  
gi|38788416 laminin, alpha 1 precursor [Homo sapiens]                  28   9.9  
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    28   9.9  
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    28   9.9  

>gi|27734925 hypothetical protein LOC285315 [Homo sapiens]
          Length = 251

 Score =  499 bits (1284), Expect = e-141
 Identities = 251/251 (100%), Positives = 251/251 (100%)

Query: 1   MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 60
           MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII
Sbjct: 1   MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 60

Query: 61  ASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGG 120
           ASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGG
Sbjct: 61  ASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGG 120

Query: 121 YFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKE 180
           YFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKE
Sbjct: 121 YFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKE 180

Query: 181 SYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKDNMNNCSLILKFRE 240
           SYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKDNMNNCSLILKFRE
Sbjct: 181 SYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKDNMNNCSLILKFRE 240

Query: 241 LISRINFRRKG 251
           LISRINFRRKG
Sbjct: 241 LISRINFRRKG 251


>gi|24497438 interleukin 12B precursor [Homo sapiens]
          Length = 328

 Score = 32.3 bits (72), Expect = 0.40
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 88  LQKELKPSQLLWFQLLGKENSALFCYLLVSKGGYFSVNLNEEILRRGLGKTVLVKGLKYD 147
           L+K++   +L W+     E   L C      G  ++++ + E+L  G GKT+ ++  ++ 
Sbjct: 26  LKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITWTLDQSSEVL--GSGKTLTIQVKEFG 83

Query: 148 SKIYWTVHRN---LLKAELTALKKGEGIWKEDSEKESYLEKFK 187
               +T H+    L  + L   KK +GIW  D  K+    K K
Sbjct: 84  DAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNK 126


>gi|21396489 mitochondrial lon peptidase 1 [Homo sapiens]
          Length = 959

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 143 GLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREI 193
           G + + KI  T  + LL+ +L  +KK  G+ K+D  K++  EKF++  +E+
Sbjct: 380 GREVEEKIKQTHRKYLLQEQLKIIKKELGLEKDD--KDAIEEKFRERLKEL 428


>gi|115527120 nebulin [Homo sapiens]
          Length = 6669

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 24/164 (14%)

Query: 16   TSKFTSSSDIPVEFIRRNVKLRGRLRRITE---NGLEIEHIPITLP--IIASLRKEPRGA 70
            T KFTS +D P + + +N  L    R  TE   N  +  H+    P  ++A L +     
Sbjct: 3425 TLKFTSITDTPEQVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSD 3484

Query: 71   LLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGGYFSVNLNEEI 130
             L KLA  E  + G   L+ +  P Q        ++ ++ + Y    K GY         
Sbjct: 3485 KLYKLALEESKKEGYD-LRLDAIPIQA---AKASRDIASDYKY----KEGY--------- 3527

Query: 131  LRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWK 174
             R+ LG  +  + +K D K+ W++H   ++++    K+ E  WK
Sbjct: 3528 -RKQLGHHIGARNIKDDPKMMWSIHVAKIQSDREYKKEFEK-WK 3569


>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
           protein 6 [Homo sapiens]
          Length = 724

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 12/72 (16%), Positives = 33/72 (45%)

Query: 152 WTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKK 211
           W     + + E    K+ E +W+++ +     EK ++   ++W+++  ++        ++
Sbjct: 539 WRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQE 598

Query: 212 ESYYEKLKRTYE 223
           E   E+ + T E
Sbjct: 599 EKIREQEEMTQE 610


>gi|157427659 coiled-coil domain containing 70 precursor [Homo
           sapiens]
          Length = 233

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 142 KGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWRE---IWKKDS 198
           K  + + K +W  +R   K +    K+   +W+ D    + L++ K  W E   +W ++ 
Sbjct: 112 KSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERD---RNLLQEDKALWEEEKALWVEER 168

Query: 199 FLKTTGSDFSLKKESYYEKLKRTYE----IWKDN 228
            L          K S +E+    +E     W +N
Sbjct: 169 ALLEGEKALWEDKTSLWEEENALWEEERAFWMEN 202



 Score = 28.5 bits (62), Expect = 5.8
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 13/54 (24%)

Query: 147 DSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWRE---IWKKD 197
           + K +W + ++  + E T  KK    WKED          K  W+E   +W++D
Sbjct: 103 EEKSFWEMEKSFREEEKTFWKKYRTFWKED----------KAFWKEDNALWERD 146


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 12/72 (16%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 152 WTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKK 211
           W     + + E    ++ E +W+++ +     +K +D    +W++D  L+    +   ++
Sbjct: 358 WEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREK-EERMREQ 416

Query: 212 ESYYEKLKRTYE 223
           E  +E++++  E
Sbjct: 417 EKMWEQVEKMRE 428


>gi|19923959 serine dehydratase-like [Homo sapiens]
          Length = 329

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 55  ITLPIIASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYL 114
           I LP   SL+   R    ++  G E+  TGK W +  L+  +L   +  G EN   F + 
Sbjct: 92  IVLPESTSLQVVQR----LQGEGAEVQLTGKVWDEANLRAQELA--KRDGWENVPPFDHP 145

Query: 115 LVSKGGYFSVNLNEEILRRGLGKTVLVKG 143
           L+ KG    V   + +LR   G  VL  G
Sbjct: 146 LIWKGHASLVQELKAVLRTPPGALVLAVG 174


>gi|82617626 paralemmin 2 isoform b [Homo sapiens]
          Length = 379

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 174 KEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKD 227
           ++  E E  +++ +D+ + + ++   L++  S  S K++   EKLK T + +KD
Sbjct: 70  RQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKD 123


>gi|82524851 paralemmin 2 isoform a [Homo sapiens]
          Length = 413

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 174 KEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKD 227
           ++  E E  +++ +D+ + + ++   L++  S  S K++   EKLK T + +KD
Sbjct: 70  RQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKD 123


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 174 KEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKD 227
           ++  E E  +++ +D+ + + ++   L++  S  S K++   EKLK T + +KD
Sbjct: 68  RQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKD 121


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 174 KEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKD 227
           ++  E E  +++ +D+ + + ++   L++  S  S K++   EKLK T + +KD
Sbjct: 68  RQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKD 121


>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 750

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 14/82 (17%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 146 YDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGS 205
           ++ +  W     + + E    K+ E +W+++ +     EK ++   ++W+++   K    
Sbjct: 486 HEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEE--KIREQ 543

Query: 206 DFSLKKESYYEKLKRTYEIWKD 227
           +   ++E   EK+    +IW++
Sbjct: 544 EEMWREE---EKMHEQEKIWEE 562


>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
          Length = 3075

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 121  YFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKE 180
            Y   +L +E +++ LGK + ++G+  ++         +L +     +  E I+KE  +  
Sbjct: 1600 YLQESLLKENMQKDLGK-IKLEGVAEETDNLQKKLTRMLASTQKVNRATERIFKESQDLA 1658

Query: 181  SYLEKFKDSWREIWKKDSFLKTTGSDFSL 209
              +E+ + S  EI +K +  +T   DF L
Sbjct: 1659 IAIERLQMSITEIMEKTTLNQTLDEDFLL 1687


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 9/50 (18%), Positives = 24/50 (48%)

Query: 152 WTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLK 201
           W     + + E    ++ E +W+++ +     +K +D    +W++D  L+
Sbjct: 320 WEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLR 369


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 167 KKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFS-----LKKESYYEKLKRT 221
           ++GE    E  E++  +   KDS + + KK S   ++ S++       K+E  Y+K KR 
Sbjct: 553 EEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRR 612

Query: 222 YE 223
            E
Sbjct: 613 IE 614


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,769,749
Number of Sequences: 37866
Number of extensions: 380059
Number of successful extensions: 1184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1157
Number of HSP's gapped (non-prelim): 34
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.