Search of human proteins with 27544927

Search of human proteins with 27544927

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27544927 ORM1-like 3 [Homo sapiens]
         (153 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27544927 ORM1-like 3 [Homo sapiens]                                313   3e-86
gi|189458852 ORM1-like 1 [Homo sapiens]                               282   7e-77
gi|7706009 ORM1-like 1 [Homo sapiens]                                 282   7e-77
gi|7661820 ORMDL2 [Homo sapiens]                                      275   1e-74
gi|122937404 membrane bound O-acyltransferase domain containing ...    29   1.8  
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    28   3.1  
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa...    28   3.1  
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa...    28   3.1  
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa...    28   3.1  
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa...    28   3.1  
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa...    28   3.1  
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa...    28   3.1  
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap...    28   3.1  
gi|21264602 laminin alpha 5 [Homo sapiens]                             28   3.1  

>gi|27544927 ORM1-like 3 [Homo sapiens]
          Length = 153

 Score =  313 bits (803), Expect = 3e-86
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60
           MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60

Query: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
           YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120

Query: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153
           QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153


>gi|189458852 ORM1-like 1 [Homo sapiens]
          Length = 153

 Score =  282 bits (722), Expect = 7e-77
 Identities = 129/153 (84%), Positives = 142/153 (92%)

Query: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60
           MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLHIVLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60

Query: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
           Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61  YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120

Query: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153
             HF+LNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153


>gi|7706009 ORM1-like 1 [Homo sapiens]
          Length = 153

 Score =  282 bits (722), Expect = 7e-77
 Identities = 129/153 (84%), Positives = 142/153 (92%)

Query: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60
           MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLHIVLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60

Query: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
           Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61  YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120

Query: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153
             HF+LNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153


>gi|7661820 ORMDL2 [Homo sapiens]
          Length = 153

 Score =  275 bits (703), Expect = 1e-74
 Identities = 124/153 (81%), Positives = 142/153 (92%)

Query: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60
           MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLH+VLLSIPF S+PVVWTLTN+IHN+  
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60

Query: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
           Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120

Query: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153
             HF++NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153


>gi|122937404 membrane bound O-acyltransferase domain containing 1
           [Homo sapiens]
          Length = 495

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 103 TITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVL-IPKLPQLHGVR 146
           T+ P V+  +    + Y  ++F L+ +SL+ +L +P  PQ H  R
Sbjct: 437 TVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPMKPQAHTQR 481


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 846 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 885


>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
           sapiens]
          Length = 1276

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 854 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 893


>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
           sapiens]
          Length = 1297

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 875 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 914


>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
           sapiens]
          Length = 1305

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 883 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 922


>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
           sapiens]
          Length = 1323

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 901 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 940


>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
           sapiens]
          Length = 1331

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 909 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 948


>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
           sapiens]
          Length = 1352

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 930 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 969


>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
           sapiens]
          Length = 1360

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGVQF-TASRKFLTITPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    + TP V
Sbjct: 938 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 977


>gi|21264602 laminin alpha 5 [Homo sapiens]
          Length = 3695

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 7    HSEVNPNTRVMNSRGIWLSYVLAI 30
            HSE+    RV   R +WL YVL +
Sbjct: 1356 HSELTVTVRVPKGRWLWLDYVLVV 1379


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.141    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,310,735
Number of Sequences: 37866
Number of extensions: 204441
Number of successful extensions: 426
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 14
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.