Search of human proteins with 27436891

Search of human proteins with 27436891

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27436891 protein O-fucosyltransferase 1 isoform 2 precursor
[Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27436891 protein O-fucosyltransferase 1 isoform 2 precursor [...   419   e-118
gi|27436889 protein O-fucosyltransferase 1 isoform 1 precursor [...   391   e-109
gi|197209974 coiled-coil and C2 domain containing 2A isoform a [...    31   0.76 
gi|197209817 coiled-coil and C2 domain containing 2A isoform b [...    31   0.76 
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa...    29   2.9  
gi|52856424 olfactory receptor, family 5, subfamily H, member 1 ...    28   3.7  
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa...    28   4.9  
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi...    28   4.9  
gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens]        28   4.9  
gi|150456471 doublecortin domain containing 2B [Homo sapiens]          28   4.9  
gi|47551347 protease, serine-like 1 [Homo sapiens]                     28   6.4  
gi|53933284 olfactory receptor, family 5, subfamily H, member 15...    28   6.4  

>gi|27436891 protein O-fucosyltransferase 1 isoform 2 precursor
           [Homo sapiens]
          Length = 194

 Score =  419 bits (1077), Expect = e-118
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL 60
           MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL
Sbjct: 1   MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL 60

Query: 61  LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE 120
           LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE
Sbjct: 61  LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE 120

Query: 121 KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ 180
           KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ
Sbjct: 121 KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ 180

Query: 181 RRENHSCVTLLFPR 194
           RRENHSCVTLLFPR
Sbjct: 181 RRENHSCVTLLFPR 194


>gi|27436889 protein O-fucosyltransferase 1 isoform 1 precursor
           [Homo sapiens]
          Length = 388

 Score =  391 bits (1005), Expect = e-109
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL 60
           MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL
Sbjct: 1   MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL 60

Query: 61  LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE 120
           LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE
Sbjct: 61  LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE 120

Query: 121 KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ 180
           KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ
Sbjct: 121 KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ 180

Query: 181 R 181
           R
Sbjct: 181 R 181


>gi|197209974 coiled-coil and C2 domain containing 2A isoform a [Homo
            sapiens]
          Length = 1620

 Score = 30.8 bits (68), Expect = 0.76
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)

Query: 13   SFLLLLLPLPGMPAG---SWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPP 69
            ++LL+   +P  P     +W+   YL++ PC G F  Q D       F  L N    + P
Sbjct: 1383 AWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFD------TFCPLKNVGCLIGP 1436

Query: 70   ---WIEYQHHKPPF-TNLHVSYQKYFK 92
               W   Q ++ P   N  V+  K +K
Sbjct: 1437 DNIWFNIQRYESPLRINFDVTRPKLWK 1463


>gi|197209817 coiled-coil and C2 domain containing 2A isoform b [Homo
            sapiens]
          Length = 1512

 Score = 30.8 bits (68), Expect = 0.76
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)

Query: 13   SFLLLLLPLPGMPAG---SWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPP 69
            ++LL+   +P  P     +W+   YL++ PC G F  Q D       F  L N    + P
Sbjct: 1275 AWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFD------TFCPLKNVGCLIGP 1328

Query: 70   ---WIEYQHHKPPF-TNLHVSYQKYFK 92
               W   Q ++ P   N  V+  K +K
Sbjct: 1329 DNIWFNIQRYESPLRINFDVTRPKLWK 1355


>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
           sapiens]
          Length = 601

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 119 PEKRV---AYCFEVAAQR-SPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTG-ISFSAS 173
           PE R+   A+ FE+   + SP    C  K      P W  F  S  K++ F G I  SA 
Sbjct: 254 PETRIMTSAHGFEILCSKCSPHFSDCK-KSLVTASPLWASFLESLKKNDYFKGLIEGSAQ 312

Query: 174 YREQWSQRRENHSCVTLLFP 193
           YRE+  +  EN+  +++ +P
Sbjct: 313 YRER-LEMAENYFQLSVDWP 331


>gi|52856424 olfactory receptor, family 5, subfamily H, member 1
           [Homo sapiens]
          Length = 313

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 6   WARPLSVSFLLLLLPLP----GMPAGSW-DPAGYLLYCPCMGRFGNQA--DHFLGSLAFA 58
           W  PL ++FL++ L       G+ A  W DP    L+ P     GN A  D ++ S    
Sbjct: 23  WKIPLFLAFLVIYLITIMGNLGLIAVIWKDPH---LHIPMYLLLGNLAFVDAWISSTVTP 79

Query: 59  KLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISL 105
           K+LN  LA    I     K  F +  +S      L    AY R +++
Sbjct: 80  KMLNNFLAKSKMISLSECKIQFFSFAISVTTECFLLATMAYDRYVAI 126


>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 122 RVAYCFEVAAQR-SPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTG-ISFSASYREQWS 179
           ++A+ FE+   + SP    C  K      P W  F  S  K++ F G I  SA YRE+  
Sbjct: 303 KLAHGFEILCSKCSPHFSDCK-KSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRER-L 360

Query: 180 QRRENHSCVTLLFP 193
           +  EN+  +++ +P
Sbjct: 361 EMAENYFQLSVDWP 374


>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
           sapiens]
          Length = 644

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 122 RVAYCFEVAAQR-SPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTG-ISFSASYREQWS 179
           ++A+ FE+   + SP    C  K      P W  F  S  K++ F G I  SA YRE+  
Sbjct: 303 KLAHGFEILCSKCSPHFSDCK-KSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRER-L 360

Query: 180 QRRENHSCVTLLFP 193
           +  EN+  +++ +P
Sbjct: 361 EMAENYFQLSVDWP 374


>gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens]
          Length = 270

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 22 PGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFT 81
          PG+PA  W   G LL    +   G Q+    G    A L N  ++    I Y  + P F 
Sbjct: 18 PGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTAISFSCRITYP-YTPQFK 76

Query: 82 NLHVSY 87
             VSY
Sbjct: 77 VFTVSY 82


>gi|150456471 doublecortin domain containing 2B [Homo sapiens]
          Length = 349

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 14  FLLLLLPLPGMPAGSWDPAG 33
           +L LL+P P +P G W P G
Sbjct: 210 YLELLVPSPSLPRGCWQPPG 229


>gi|47551347 protease, serine-like 1 [Homo sapiens]
          Length = 283

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 1  MGAAAWARPLSVSFLLLLLPLPGMPAGSW 29
          +G   W RPL      L+LP+   PAGSW
Sbjct: 3  LGLRGWGRPLLTVATALMLPVK-PPAGSW 30


>gi|53933284 olfactory receptor, family 5, subfamily H, member 15
           [Homo sapiens]
          Length = 313

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 6   WARPLSVSFLLLLLPLP----GMPAGSW-DPAGYLLYCPCMGRFGNQA--DHFLGSLAFA 58
           W  PL ++FL++ L       G+ A  W DP    L+ P     GN A  D ++ S    
Sbjct: 23  WKIPLFLAFLVIYLITIMGNLGLIAVIWKDPH---LHIPMYLLLGNLAFVDAWISSTVTP 79

Query: 59  KLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISL 105
           K+LN  LA    I     K  F ++ +       L    AY R +++
Sbjct: 80  KMLNNFLAKSKMISLSECKIQFFSIAIGVTTECFLLATMAYDRYVAI 126


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,854,711
Number of Sequences: 37866
Number of extensions: 408834
Number of successful extensions: 1034
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 12
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.