Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL15 Sequence: fasta or formatted (162aa) NCBI GI: 26787984
Description:

interleukin 15 preproprotein

Referenced in:

Interleukins and Their Receptors
Hematopoiesis and Erythrocytes

Other entries for this name:
alt mRNA [162aa] interleukin 15 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          7           1
 C cysteine            4.3          7           1
 D aspartate           3.7          6           1
 E glutamate           8.6         14           2
 F phenylalanine       4.3          7           1
 G glycine             3.7          6           1
 H histidine           4.3          7           1
 I isoleucine          9.9         16           2
 K lysine              5.6          9           2
 L leucine            12.3         20           3
 M methionine          2.5          4           1
 N asparagine          6.2         10           2
 P proline             1.9          3           1
 Q glutamine           3.1          5           1
 R arginine            1.2          2           1
 S serine             11.1         18           2
 T threonine           4.9          8           1
 V valine              6.2         10           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 15 preproprotein 
IL15                  1.000   interleukin 15 preproprotein 
IL21                  0.043   interleukin 21 
AGTRAP                0.017   angiotensin II receptor-associated protein isoform e...
AGTRAP                0.017   angiotensin II receptor-associated protein isoform d...
CHL1                  0.010   cell adhesion molecule with homology to L1CAM precur...
G3BP2                 0.010   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.010   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.010   Ras-GTPase activating protein SH3 domain-binding pro...
HSPG2                 0.007   heparan sulfate proteoglycan 2 
CCDC110               0.007   coiled-coil domain containing 110 isoform b 
CCDC110               0.007   coiled-coil domain containing 110 isoform a 
OR6N1                 0.007   olfactory receptor, family 6, subfamily N, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press