Search of human proteins with 254281335

Search of human proteins with 254281335

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|254281335 glutaminyl-peptide cyclotransferase-like isoform 2
[Homo sapiens]
         (288 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|254281335 glutaminyl-peptide cyclotransferase-like isoform 2 ...   592   e-169
gi|92110027 glutaminyl-peptide cyclotransferase-like isoform 1 [...   360   1e-99
gi|6912618 glutaminyl-peptide cyclotransferase precursor [Homo s...   200   1e-51
gi|19924175 axonal transport of synaptic vesicles [Homo sapiens]       31   1.1  
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]         31   1.4  
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      30   1.9  
gi|115430259 solute carrier family 39 (zinc transporter), member...    30   2.5  
gi|115430255 solute carrier family 39 (zinc transporter), member...    30   2.5  
gi|57634534 nucleoporin 205kDa [Homo sapiens]                          30   2.5  
gi|41393563 kinesin family member 1B isoform b [Homo sapiens]          28   9.3  

>gi|254281335 glutaminyl-peptide cyclotransferase-like isoform 2
           [Homo sapiens]
          Length = 288

 Score =  592 bits (1526), Expect = e-169
 Identities = 288/288 (100%), Positives = 288/288 (100%)

Query: 1   MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE 60
           MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE
Sbjct: 1   MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE 60

Query: 61  ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAP 120
           ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAP
Sbjct: 61  ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAP 120

Query: 121 VTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAP 180
           VTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAP
Sbjct: 121 VTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAP 180

Query: 181 NPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRR 240
           NPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRR
Sbjct: 181 NPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRR 240

Query: 241 GVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL 288
           GVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL
Sbjct: 241 GVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL 288


>gi|92110027 glutaminyl-peptide cyclotransferase-like isoform 1
           [Homo sapiens]
          Length = 382

 Score =  360 bits (923), Expect = 1e-99
 Identities = 171/173 (98%), Positives = 173/173 (100%)

Query: 116 RKAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLD 175
           ++AAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLD
Sbjct: 210 KQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLD 269

Query: 176 LLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHI 235
           LLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHI
Sbjct: 270 LLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHI 329

Query: 236 PFLRRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL 288
           PFLRRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL
Sbjct: 330 PFLRRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL 382



 Score =  241 bits (614), Expect = 7e-64
 Identities = 120/126 (95%), Positives = 121/126 (96%)

Query: 1   MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE 60
           MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE
Sbjct: 1   MRSGGRGRPRLRLGERGLMEPLLPPKRRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTE 60

Query: 61  ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAP 120
           ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRK   
Sbjct: 61  ELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLE 120

Query: 121 VTLQLL 126
            TL+ L
Sbjct: 121 ATLRSL 126


>gi|6912618 glutaminyl-peptide cyclotransferase precursor [Homo
           sapiens]
          Length = 361

 Score =  200 bits (508), Expect = 1e-51
 Identities = 98/171 (57%), Positives = 120/171 (70%), Gaps = 3/171 (1%)

Query: 121 VTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGP---TRIQAIELFMLLDLL 177
           ++LQL+F DGEEA   W P+DSLYGSRHLA  M S PH PG    +++  ++L +LLDL+
Sbjct: 191 LSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLI 250

Query: 178 GAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPF 237
           GAPNPTF + FP + RWF RL++IE  LH L LL+ H  E  YFQ     G ++DDHIPF
Sbjct: 251 GAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPF 310

Query: 238 LRRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLGL 288
           LRRGVPVLHLI +PFP VWHT  D E NL   T+ NL +IL VF+ EYL L
Sbjct: 311 LRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLHL 361



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 27  RRLLPRVRLLPLLLALAVGSAFYTIWSGWHRRTEELPLGRELRVPLIGSLPEARLRRVVG 86
           RR++  + LL L+ AL   S       G        P  +    P I  L  + LR++  
Sbjct: 7   RRVVGTLHLLLLVAALPWASR------GVSPSASAWPEEKNYHQPAI--LNSSALRQIAE 58

Query: 87  QLDPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAPVTLQLLFLD 129
                 +W   L+PLL+ R PGSPG+   R+     +Q L  D
Sbjct: 59  GTSISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQAD 101


>gi|19924175 axonal transport of synaptic vesicles [Homo sapiens]
          Length = 1690

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 55   WHRRTEELPLGRELRVPL-IGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTPGSPGNL 113
            ++ R  +LP  R +R     GSL  +   RV G          Y   L  V   GSPG +
Sbjct: 1291 FYSRDAKLPASRSIRNLFGSGSLRASESNRVTG---------VYELSLCHVADAGSPG-M 1340

Query: 114  QVRKAAPVTLQLLFLDGEEALKEWGPK-DSL 143
            Q R+   +   + ++ GEE L  W P+ DSL
Sbjct: 1341 QRRRRRVLDTSVAYVRGEENLAGWRPRSDSL 1371


>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
          Length = 485

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 6   RGRPRLRLGERGLMEPLLPPKRRLLPRVRLL--PLLLALAVGSAFYTIWS--GWHRRTEE 61
           R RPR+R   RGL  P   P RR +PR   L  PL L         + W+   W RR   
Sbjct: 402 RLRPRIR--RRGLGPPAAAPARRRIPRTPALCTPLALPAPTTRRRQSPWTRFQWRRRAWA 459

Query: 62  LPL 64
            PL
Sbjct: 460 APL 462


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 20/119 (16%)

Query: 48  FYTIWSGWHRRTEELPLGRELRVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPLLVVRTP 107
           ++T+  GW  R E    GREL +P   +          G   P   W    +P     + 
Sbjct: 421 YFTVLPGWEYRQEA---GRELLIPCAAA----------GDPFPVITWRKVGKPSRSKHSA 467

Query: 108 GSPGNLQVRKAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQ 166
              G+LQ R  +          GE          S+  S HL  +  S PH+PG  R+Q
Sbjct: 468 LPSGSLQFRALSKED------HGEWECVATNVVTSITASTHLTVIGTS-PHAPGSVRVQ 519


>gi|115430259 solute carrier family 39 (zinc transporter), member 4
           isoform 1 [Homo sapiens]
          Length = 622

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 11/44 (25%)

Query: 20  EPLLPPKRRLLPRVRLLPLLL-----------ALAVGSAFYTIW 52
           E L P  RRL P +RLLP ++            LAVG+AF + W
Sbjct: 455 ELLNPEPRRLSPELRLLPYMITLGDAVHNFADGLAVGAAFASSW 498


>gi|115430255 solute carrier family 39 (zinc transporter), member 4
           isoform 2 [Homo sapiens]
          Length = 647

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 11/44 (25%)

Query: 20  EPLLPPKRRLLPRVRLLPLLL-----------ALAVGSAFYTIW 52
           E L P  RRL P +RLLP ++            LAVG+AF + W
Sbjct: 480 ELLNPEPRRLSPELRLLPYMITLGDAVHNFADGLAVGAAFASSW 523


>gi|57634534 nucleoporin 205kDa [Homo sapiens]
          Length = 2012

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 170  LFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYF----QPGE 225
            LF  L  L   N  +       + W  +  SIE R+  LN  +SH Q +++      P +
Sbjct: 1091 LFSQLQYLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLLHLLLDDMPVK 1150

Query: 226  PF----GSVEDDH 234
            P+    G +ED++
Sbjct: 1151 PYSDGEGGIEDEN 1163


>gi|41393563 kinesin family member 1B isoform b [Homo sapiens]
          Length = 1770

 Score = 28.1 bits (61), Expect = 9.3
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 89   DPQRLWSTYLRPLLVVRTPGSPGNLQVRKAAPVTLQLLFLDGEEALKEWGPK-DSL 143
            D  R+   Y   L  +   GSPG +Q R+   +   + ++ GEE L  W P+ DSL
Sbjct: 1388 DSNRVTGIYELSLCKMSDTGSPG-MQRRRRKILDTSVAYVRGEENLAGWRPRGDSL 1442


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.143    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,497,037
Number of Sequences: 37866
Number of extensions: 684228
Number of successful extensions: 1964
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1955
Number of HSP's gapped (non-prelim): 16
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.