Guide to the Human Genome
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Name: MRPL11 Sequence: fasta or formatted (166aa) NCBI GI: 25306272
Description:

mitochondrial ribosomal protein L11 isoform b

Referenced in:

Ribosomes

Other entries for this name:
alt prot [181aa] mitochondrial ribosomal protein L11 isoform c
alt prot [192aa] mitochondrial ribosomal protein L11 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.3         22           3
 C cysteine            0.6          1           1
 D aspartate           3.6          6           1
 E glutamate           9.0         15           2
 F phenylalanine       4.2          7           1
 G glycine             6.6         11           1
 H histidine           0.6          1           1
 I isoleucine          7.8         13           2
 K lysine             10.8         18           2
 L leucine             8.4         14           1
 M methionine          0.6          1           1
 N asparagine          1.2          2           1
 P proline             3.6          6           1
 Q glutamine           4.8          8           1
 R arginine            7.2         12           1
 S serine              6.0         10           2
 T threonine           3.6          6           1
 V valine              6.6         11           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L11 isoform b 
MRPL11                0.948   mitochondrial ribosomal protein L11 isoform a 
MRPL11                0.739   mitochondrial ribosomal protein L11 isoform c 
GGA1                  0.021   golgi associated, gamma adaptin ear containing, ARF b...
GGA1                  0.021   golgi associated, gamma adaptin ear containing, ARF ...
FAM178B               0.017   hypothetical protein LOC51252 isoform A 
SLC1A6                0.017   solute carrier family 1 (high affinity aspartate/glut...
GGA1                  0.017   golgi associated, gamma adaptin ear containing, ARF ...
CIT                   0.017   citron 
OSBPL7                0.010   oxysterol-binding protein-like protein 7 
CNN2                  0.010   calponin 2 isoform a 
CYP7B1                0.007   cytochrome P450, family 7, subfamily B, polypeptide 1...
RAD21L1               0.007   RAD21-like 1 
LOC100292655          0.007   PREDICTED: similar to armadillo repeat containing, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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