Guide to the Human Genome
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Search of human proteins with 24431939

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo
sapiens]
         (341 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo s...   689   0.0  
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s...    62   1e-09
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s...    62   1e-09
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...    60   4e-09
gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...    60   4e-09
gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo sa...    59   5e-09
gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]         59   8e-09
gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo sa...    57   2e-08
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap...    54   2e-07
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap...    54   3e-07
gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sap...    52   1e-06
gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo s...    52   1e-06
gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    51   1e-06
gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    51   1e-06
gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...    51   1e-06
gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    51   2e-06
gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    51   2e-06
gi|5031741 DnaJ subfamily A member 2 [Homo sapiens]                    50   4e-06
gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    49   5e-06
gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    49   5e-06
gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    49   6e-06
gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    49   6e-06
gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sap...    49   8e-06
gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo sa...    48   1e-05
gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    47   3e-05
gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    47   3e-05
gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...    47   3e-05
gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...    46   4e-05
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    45   9e-05
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    45   9e-05

>gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo
           sapiens]
          Length = 341

 Score =  689 bits (1779), Expect = 0.0
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MAKGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQAN 60
           MAKGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQAN
Sbjct: 1   MAKGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQAN 60

Query: 61  RAQGQRQSPRGVTPPLSPIRFAAQVIVGIYFGLVALISLSSMVNFYIVALPLAVGLGVLL 120
           RAQGQRQSPRGVTPPLSPIRFAAQVIVGIYFGLVALISLSSMVNFYIVALPLAVGLGVLL
Sbjct: 61  RAQGQRQSPRGVTPPLSPIRFAAQVIVGIYFGLVALISLSSMVNFYIVALPLAVGLGVLL 120

Query: 121 VAAVGNQTSDFKNTLGSAFLTSPIFYGRPIAILPISVAASITAQRHRRYKALVASEPLSV 180
           VAAVGNQTSDFKNTLGSAFLTSPIFYGRPIAILPISVAASITAQRHRRYKALVASEPLSV
Sbjct: 121 VAAVGNQTSDFKNTLGSAFLTSPIFYGRPIAILPISVAASITAQRHRRYKALVASEPLSV 180

Query: 181 RLYRLGLAYLAFTGPLAYSALCNTAATLSYVAETFGSFLNWFSFFPLLGRLMEFVLLLPY 240
           RLYRLGLAYLAFTGPLAYSALCNTAATLSYVAETFGSFLNWFSFFPLLGRLMEFVLLLPY
Sbjct: 181 RLYRLGLAYLAFTGPLAYSALCNTAATLSYVAETFGSFLNWFSFFPLLGRLMEFVLLLPY 240

Query: 241 RIWRLLMGETGFNSSCFQEWAKLYEFVHSFQDEKRQLAYQVLGLSEGATNEEIHRSYQEL 300
           RIWRLLMGETGFNSSCFQEWAKLYEFVHSFQDEKRQLAYQVLGLSEGATNEEIHRSYQEL
Sbjct: 241 RIWRLLMGETGFNSSCFQEWAKLYEFVHSFQDEKRQLAYQVLGLSEGATNEEIHRSYQEL 300

Query: 301 VKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRKPWGSRR 341
           VKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRKPWGSRR
Sbjct: 301 VKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRKPWGSRR 341


>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
           sapiens]
          Length = 576

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+ LG+   A+ EE+ ++Y++L   WHPD NLD   EA   F  IQAAY+VLS P++
Sbjct: 5   YEALGVRRDASEEELKKAYRKLALKWHPDKNLDNAAEAAEQFKLIQAAYDVLSDPQE 61


>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
           sapiens]
          Length = 531

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+ LG+   A+ EE+ ++Y++L   WHPD NLD   EA   F  IQAAY+VLS P++
Sbjct: 5   YEALGVRRDASEEELKKAYRKLALKWHPDKNLDNAAEAAEQFKLIQAAYDVLSDPQE 61


>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
           [Homo sapiens]
          Length = 326

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VLG+   A+ E+I ++Y++L   WHPD N +  EEA+R F ++  AYEVLS  +K
Sbjct: 5   YEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKK 61


>gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b
           [Homo sapiens]
          Length = 241

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VLG+   A+ E+I ++Y++L   WHPD N +  EEA+R F ++  AYEVLS  +K
Sbjct: 5   YEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKK 61


>gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo
           sapiens]
          Length = 309

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 27/57 (47%), Positives = 37/57 (64%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VLGL   A+ E+I ++Y ++   WHPD N +  EEA+R F E+  AYEVLS   K
Sbjct: 5   YEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEK 61


>gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]
          Length = 232

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 26/57 (45%), Positives = 38/57 (66%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VLG+   A+ E+I ++Y++L   WHPD N D  EEA++ F  +  AYEVLS  +K
Sbjct: 5   YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 61


>gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo
           sapiens]
          Length = 145

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 25/57 (43%), Positives = 38/57 (66%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VL +   A++E I ++Y++L   WHPD N +  EEA+R F ++  AYEVLS  +K
Sbjct: 5   YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 61


>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
           sapiens]
          Length = 340

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           YQ LGL+ GA++EEI R+Y+     +HPD N  +   A+  F EI  AY+VLS PRK
Sbjct: 6   YQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDPRK 60


>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
           sapiens]
          Length = 504

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 271 QDEKRQLAYQVLGLSEGATNEEIHRSYQELVKVWHPDH--NLDQTEEAQRHFLEIQAAYE 328
           Q +KR   Y++LG+   A  +EI ++Y++L   WHPD+  N ++ ++A++ F++I AA E
Sbjct: 389 QSQKRDY-YKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKE 447

Query: 329 VLSQP 333
           VLS P
Sbjct: 448 VLSDP 452


>gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo
           sapiens]
          Length = 337

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y +LG+ +GA++E+I ++Y++    +HPD N  ++ +A+  F E+  AYEVLS P+K
Sbjct: 6   YCILGIEKGASDEDIKKAYRKQALKFHPDKN--KSPQAEEKFKEVAEAYEVLSDPKK 60


>gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo
           sapiens]
          Length = 782

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y+VLG+S  A+  +I ++Y++L + WHPD N D    A+  F++I  AYE+LS   K
Sbjct: 31  YRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDKFIQISKAYEILSNEEK 85


>gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1
           [Homo sapiens]
          Length = 420

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+  GA  +EI ++Y+++   +HPD N  +   A+  F EI  AY+VLS P+K
Sbjct: 78  YKILGIPSGANEDEIKKAYRKMALKYHPDKN--KEPNAEEKFKEIAEAYDVLSDPKK 132


>gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 2
           [Homo sapiens]
          Length = 382

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+  GA  +EI ++Y+++   +HPD N  +   A+  F EI  AY+VLS P+K
Sbjct: 40  YKILGIPSGANEDEIKKAYRKMALKYHPDKN--KEPNAEEKFKEIAEAYDVLSDPKK 94


>gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
           [Homo sapiens]
          Length = 348

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+  GA  +EI ++Y+++   +HPD N  +   A+  F EI  AY+VLS P+K
Sbjct: 6   YKILGIPSGANEDEIKKAYRKMALKYHPDKN--KEPNAEEKFKEIAEAYDVLSDPKK 60


>gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform a
           [Homo sapiens]
          Length = 277

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++L +   A+ ++I ++Y+     WHPD N D  E A++ F E+  AYEVLS   K
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61


>gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform b
           [Homo sapiens]
          Length = 324

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++L +   A+ ++I ++Y+     WHPD N D  E A++ F E+  AYEVLS   K
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61


>gi|5031741 DnaJ subfamily A member 2 [Homo sapiens]
          Length = 412

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y +LG+  GA+  E+ ++Y++L K +HPD N      A   F EI  AYEVLS P K
Sbjct: 10  YDILGVPPGASENELKKAYRKLAKEYHPDKN----PNAGDKFKEISFAYEVLSNPEK 62


>gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2
           [Homo sapiens]
          Length = 397

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 4/57 (7%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y +LG+   A+ EEI ++Y++L   +HPD N D+ E+    F  I  AYEVLS P+K
Sbjct: 8   YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEK----FKLISQAYEVLSDPKK 60


>gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
           [Homo sapiens]
          Length = 426

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 4/57 (7%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y +LG+   A+ EEI ++Y++L   +HPD N D+ E+    F  I  AYEVLS P+K
Sbjct: 37  YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEK----FKLISQAYEVLSDPKK 89


>gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
           [Homo sapiens]
          Length = 453

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           YQ+LG+   A+ +EI ++Y +L K +HPD N D   +A+  F ++  AYEVLS   K
Sbjct: 95  YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVK 150


>gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1
           [Homo sapiens]
          Length = 480

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           YQ+LG+   A+ +EI ++Y +L K +HPD N D   +A+  F ++  AYEVLS   K
Sbjct: 95  YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVK 150


>gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo
           sapiens]
          Length = 397

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 274 KRQLAYQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQP 333
           K    Y VLG+   AT EE+ ++Y++L   +HPD N ++ E+    F +I  AYEVLS  
Sbjct: 3   KETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEK----FKQISQAYEVLSDA 58

Query: 334 RK 335
           +K
Sbjct: 59  KK 60


>gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo
           sapiens]
          Length = 198

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y VLGL + AT+++I +SY++L   +HPD N D  E A + F EI  A+ +L+   K
Sbjct: 17  YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADK-FKEINNAHAILTDATK 72


>gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
           sapiens]
          Length = 409

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+S GA++E++ ++Y+ L   +HPD N      A   F  I  AY VLS P K
Sbjct: 146 YEILGVSRGASDEDLKKAYRRLALKFHPDKN--HAPGATEAFKAIGTAYAVLSNPEK 200


>gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
           sapiens]
          Length = 409

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+S GA++E++ ++Y+ L   +HPD N      A   F  I  AY VLS P K
Sbjct: 146 YEILGVSRGASDEDLKKAYRRLALKFHPDKN--HAPGATEAFKAIGTAYAVLSNPEK 200


>gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Homo
           sapiens]
          Length = 199

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LGL +GA+NEEI ++Y++L    HPD N D     ++ F EI  A+ +L+   K
Sbjct: 21  YEILGLHKGASNEEIKKTYRKLALKHHPDKNPDDPAATEK-FKEINNAHAILTDISK 76


>gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precursor
           [Homo sapiens]
          Length = 358

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 279 YQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRK 335
           Y++LG+   A+ ++I ++Y++L    HPD N D   +AQ  F ++ AAYEVLS   K
Sbjct: 27  YKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD-PQAQEKFQDLGAAYEVLSDSEK 82


>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
           [Homo sapiens]
          Length = 438

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 274 KRQLAYQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRH----FLEIQAAYEV 329
           KR+  Y++LG+ + A+ +EI ++Y++   + HPD +   + E Q+     F E+  A+ +
Sbjct: 322 KRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTI 381

Query: 330 LSQPRK 335
           LS P+K
Sbjct: 382 LSDPKK 387


>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
           [Homo sapiens]
          Length = 494

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 274 KRQLAYQVLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRH----FLEIQAAYEV 329
           KR+  Y++LG+ + A+ +EI ++Y++   + HPD +   + E Q+     F E+  A+ +
Sbjct: 378 KRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTI 437

Query: 330 LSQPRK 335
           LS P+K
Sbjct: 438 LSDPKK 443


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.139    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,625,095
Number of Sequences: 37866
Number of extensions: 538432
Number of successful extensions: 1732
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1659
Number of HSP's gapped (non-prelim): 60
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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