Search of human proteins with 24430197

Search of human proteins with 24430197

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo
sapiens]
         (791 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo ...  1638   0.0  
gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo ...  1429   0.0  
gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo ...  1382   0.0  
gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]        100   9e-21
gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]        100   9e-21
gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]        100   9e-21
gi|193290182 interleukin 17 receptor E-like [Homo sapiens]             71   4e-12
gi|23238208 interleukin 17A receptor precursor [Homo sapiens]          56   1e-07
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]                       36   0.12 
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]                       36   0.12 
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]                       36   0.12 
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]                       36   0.12 
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    35   0.27 
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    35   0.27 
gi|239756535 PREDICTED: hypothetical protein [Homo sapiens]            34   0.61 
gi|239751051 PREDICTED: hypothetical protein [Homo sapiens]            34   0.61 
gi|239745492 PREDICTED: hypothetical protein XP_002343473 [Homo ...    34   0.61 
gi|115511036 alpha-kinase 3 [Homo sapiens]                             34   0.61 
gi|209862787 hypothetical protein LOC100191040 [Homo sapiens]          33   1.0  
gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens]        33   1.3  
gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens]        33   1.3  
gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens]         33   1.3  
gi|168229174 RNA binding motif protein 27 [Homo sapiens]               33   1.3  
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s...    32   3.0  
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]         31   3.9  

>gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo
           sapiens]
          Length = 791

 Score = 1638 bits (4242), Expect = 0.0
 Identities = 791/791 (100%), Positives = 791/791 (100%)

Query: 1   MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSPVSLEPWGDEERLRVQFLAQQSLSLA 60
           MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSPVSLEPWGDEERLRVQFLAQQSLSLA
Sbjct: 1   MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSPVSLEPWGDEERLRVQFLAQQSLSLA 60

Query: 61  PVTAATARTALSGLSGADGRREERGRGKSWVCLSLGGSGNTEPQKKGLSCRLWDSDILCL 120
           PVTAATARTALSGLSGADGRREERGRGKSWVCLSLGGSGNTEPQKKGLSCRLWDSDILCL
Sbjct: 61  PVTAATARTALSGLSGADGRREERGRGKSWVCLSLGGSGNTEPQKKGLSCRLWDSDILCL 120

Query: 121 PGDIVPAPGPVLAPTHLQTELVLRCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAA 180
           PGDIVPAPGPVLAPTHLQTELVLRCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAA
Sbjct: 121 PGDIVPAPGPVLAPTHLQTELVLRCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAA 180

Query: 181 DSGVEEPRNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGS 240
           DSGVEEPRNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGS
Sbjct: 181 DSGVEEPRNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGS 240

Query: 241 EVRIWSYTQPRYEKELNHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSE 300
           EVRIWSYTQPRYEKELNHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSE
Sbjct: 241 EVRIWSYTQPRYEKELNHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSE 300

Query: 301 EQHFGLSLYWNQVQGPPKPRWHKNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICP 360
           EQHFGLSLYWNQVQGPPKPRWHKNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICP
Sbjct: 301 EQHFGLSLYWNQVQGPPKPRWHKNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICP 360

Query: 361 FREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEN 420
           FREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEN
Sbjct: 361 FREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEN 420

Query: 421 VTVDKVLEFPLLKGHPNLCVQVNSSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSL 480
           VTVDKVLEFPLLKGHPNLCVQVNSSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSL
Sbjct: 421 VTVDKVLEFPLLKGHPNLCVQVNSSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSL 480

Query: 481 CALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWA 540
           CALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWA
Sbjct: 481 CALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWA 540

Query: 541 LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL 600
           LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL
Sbjct: 541 LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL 600

Query: 601 VGALASALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALC 660
           VGALASALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALC
Sbjct: 601 VGALASALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALC 660

Query: 661 SEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRT 720
           SEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRT
Sbjct: 661 SEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRT 720

Query: 721 VPVFTLPSQLPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVG 780
           VPVFTLPSQLPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVG
Sbjct: 721 VPVFTLPSQLPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVG 780

Query: 781 PGAGPGAGDGT 791
           PGAGPGAGDGT
Sbjct: 781 PGAGPGAGDGT 791


>gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo
           sapiens]
          Length = 720

 Score = 1429 bits (3699), Expect = 0.0
 Identities = 692/708 (97%), Positives = 694/708 (98%), Gaps = 3/708 (0%)

Query: 87  GKSWVCLSLG---GSGNTEPQKKGLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL 143
           G+S V LSL    G  +      GLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL
Sbjct: 13  GRSPVVLSLERLVGPQDATHCSPGLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL 72

Query: 144 RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY 203
           RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY
Sbjct: 73  RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY 132

Query: 204 PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP 263
           PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP
Sbjct: 133 PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP 192

Query: 264 DCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK 323
           DCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK
Sbjct: 193 DCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK 252

Query: 324 NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ 383
           NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ
Sbjct: 253 NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ 312

Query: 384 SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN 443
           SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN
Sbjct: 313 SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN 372

Query: 444 SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG 503
           SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG
Sbjct: 373 SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG 432

Query: 504 EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH 563
           EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH
Sbjct: 433 EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH 492

Query: 564 AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR 623
           AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR
Sbjct: 493 AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR 552

Query: 624 ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS 683
           ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS
Sbjct: 553 ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS 612

Query: 684 LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP 743
           LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP
Sbjct: 613 LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP 672

Query: 744 RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT 791
           RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT
Sbjct: 673 RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT 720



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)

Query: 1  MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSP-VSLEPWGDE 44
          MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSP +S   W  +
Sbjct: 1  MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSPGLSCRLWDSD 45


>gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo
           sapiens]
          Length = 705

 Score = 1382 bits (3578), Expect = 0.0
 Identities = 677/708 (95%), Positives = 679/708 (95%), Gaps = 18/708 (2%)

Query: 87  GKSWVCLSLG---GSGNTEPQKKGLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL 143
           G+S V LSL    G  +      GLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL
Sbjct: 13  GRSPVVLSLERLVGPQDATHCSPGLSCRLWDSDILCLPGDIVPAPGPVLAPTHLQTELVL 72

Query: 144 RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY 203
           RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY
Sbjct: 73  RCQKETDCDLCLRVAVHLAVHGHWEEPEDEEKFGGAADSGVEEPRNASLQAQVVLSFQAY 132

Query: 204 PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP 263
           PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP
Sbjct: 133 PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELNHTQQLP 192

Query: 264 DCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK 323
                          ALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK
Sbjct: 193 ---------------ALPWLNVSADGDNVHLVLNVSEEQHFGLSLYWNQVQGPPKPRWHK 237

Query: 324 NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ 383
           NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ
Sbjct: 238 NLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQ 297

Query: 384 SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN 443
           SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN
Sbjct: 298 SWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVN 357

Query: 444 SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG 503
           SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG
Sbjct: 358 SSEKLQLQECLWADSLGPLKDDVLLLETRGPQDNRSLCALEPSGCTSLPSKASTRAARLG 417

Query: 504 EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH 563
           EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH
Sbjct: 418 EYLLQDLQSGQCLQLWDDDLGALWACPMDKYIHKRWALVWLACLLFAAALSLILLLKKDH 477

Query: 564 AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR 623
           AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR
Sbjct: 478 AKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERLVGALASALCQLPLRVAVDLWSRR 537

Query: 624 ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS 683
           ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS
Sbjct: 538 ELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAHGPHDAFRAS 597

Query: 684 LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP 743
           LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP
Sbjct: 598 LSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAP 657

Query: 744 RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT 791
           RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT
Sbjct: 658 RSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGDGT 705



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)

Query: 1  MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSP-VSLEPWGDE 44
          MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSP +S   W  +
Sbjct: 1  MPVPWFLLSLALGRSPVVLSLERLVGPQDATHCSPGLSCRLWDSD 45


>gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 122/463 (26%), Positives = 182/463 (39%), Gaps = 64/463 (13%)

Query: 323 KNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAH-QNLWQAARLRLLT 381
           K ++G   + L +  L+PCLCI+   L+ D+VR   CPF+  P A+  + W++      +
Sbjct: 223 KIVSGGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYS 282

Query: 382 LQSWL---LDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNL 438
             + +   L   C L  EAALC R      C+ L    + E+   D       +  HP L
Sbjct: 283 QHTQMVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATARES---DGWYVLEKVDLHPQL 339

Query: 439 CVQVNSSEKLQLQEC--------LWADSLGPLKDDVLL-LETRGPQDNRSLCALEPSGCT 489
           C + +      + EC         W  S+      ++L   +R      +  +L   G  
Sbjct: 340 CFKFSFGNSSHV-ECPHQTGSLTSWNVSMDTQAQQLILHFSSRMHATFSAAWSLPGLGQD 398

Query: 490 SLPSKASTRAARLG------EYLLQDLQSGQCLQLWDDDLGALW---ACPMDKYIHKRWA 540
           +L     T +   G      + ++  L+ G C+ +W  D+   W    CP   Y H    
Sbjct: 399 TLVPPVYTVSQARGSSPVSLDLIIPFLRPGCCVLVWRSDVQFAWKHLLCPDVSYRHLGLL 458

Query: 541 LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL 600
           ++ L  LL    + L L  ++  +                   R  LLL++AD     RL
Sbjct: 459 ILALLALLTLLGVVLALTCRRPQS--------------GPGPARPVLLLHAADSEAQRRL 504

Query: 601 VGALASALCQL---PLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAV 657
           VGALA  L         V VDLW  R ++  GP+ W  A R +  +E G V+LL+S   +
Sbjct: 505 VGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWLWAARTRVAREQGTVLLLWSGADL 564

Query: 658 ALCSEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPAL 717
                     VSGP    P  A   +L    P  L        + A F RL     +P  
Sbjct: 565 R--------PVSGP---DPRAAPLLALLHAAPRPL-------LLLAYFSRLCAKGDIPPP 606

Query: 718 FRTVPVFTLPSQLPDFLGALQQ---PRAPRSGRLQERAEQVSR 757
            R +P + L   LP  L AL       A   GRL  R  + SR
Sbjct: 607 LRALPRYRLLRDLPRLLRALDARPFAEATSWGRLGARQRRQSR 649


>gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]
          Length = 551

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 122/463 (26%), Positives = 182/463 (39%), Gaps = 64/463 (13%)

Query: 323 KNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAH-QNLWQAARLRLLT 381
           K ++G   + L +  L+PCLCI+   L+ D+VR   CPF+  P A+  + W++      +
Sbjct: 107 KIVSGGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYS 166

Query: 382 LQSWL---LDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNL 438
             + +   L   C L  EAALC R      C+ L    + E+   D       +  HP L
Sbjct: 167 QHTQMVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATARES---DGWYVLEKVDLHPQL 223

Query: 439 CVQVNSSEKLQLQEC--------LWADSLGPLKDDVLL-LETRGPQDNRSLCALEPSGCT 489
           C + +      + EC         W  S+      ++L   +R      +  +L   G  
Sbjct: 224 CFKFSFGNSSHV-ECPHQTGSLTSWNVSMDTQAQQLILHFSSRMHATFSAAWSLPGLGQD 282

Query: 490 SLPSKASTRAARLG------EYLLQDLQSGQCLQLWDDDLGALW---ACPMDKYIHKRWA 540
           +L     T +   G      + ++  L+ G C+ +W  D+   W    CP   Y H    
Sbjct: 283 TLVPPVYTVSQARGSSPVSLDLIIPFLRPGCCVLVWRSDVQFAWKHLLCPDVSYRHLGLL 342

Query: 541 LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL 600
           ++ L  LL    + L L  ++  +                   R  LLL++AD     RL
Sbjct: 343 ILALLALLTLLGVVLALTCRRPQS--------------GPGPARPVLLLHAADSEAQRRL 388

Query: 601 VGALASALCQL---PLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAV 657
           VGALA  L         V VDLW  R ++  GP+ W  A R +  +E G V+LL+S   +
Sbjct: 389 VGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWLWAARTRVAREQGTVLLLWSGADL 448

Query: 658 ALCSEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPAL 717
                     VSGP    P  A   +L    P  L        + A F RL     +P  
Sbjct: 449 R--------PVSGP---DPRAAPLLALLHAAPRPL-------LLLAYFSRLCAKGDIPPP 490

Query: 718 FRTVPVFTLPSQLPDFLGALQQ---PRAPRSGRLQERAEQVSR 757
            R +P + L   LP  L AL       A   GRL  R  + SR
Sbjct: 491 LRALPRYRLLRDLPRLLRALDARPFAEATSWGRLGARQRRQSR 533


>gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 122/463 (26%), Positives = 182/463 (39%), Gaps = 64/463 (13%)

Query: 323 KNLTGPQIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAH-QNLWQAARLRLLT 381
           K ++G   + L +  L+PCLCI+   L+ D+VR   CPF+  P A+  + W++      +
Sbjct: 223 KIVSGGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYS 282

Query: 382 LQSWL---LDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNL 438
             + +   L   C L  EAALC R      C+ L    + E+   D       +  HP L
Sbjct: 283 QHTQMVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATARES---DGWYVLEKVDLHPQL 339

Query: 439 CVQVNSSEKLQLQEC--------LWADSLGPLKDDVLL-LETRGPQDNRSLCALEPSGCT 489
           C + +      + EC         W  S+      ++L   +R      +  +L   G  
Sbjct: 340 CFKFSFGNSSHV-ECPHQTGSLTSWNVSMDTQAQQLILHFSSRMHATFSAAWSLPGLGQD 398

Query: 490 SLPSKASTRAARLG------EYLLQDLQSGQCLQLWDDDLGALW---ACPMDKYIHKRWA 540
           +L     T +   G      + ++  L+ G C+ +W  D+   W    CP   Y H    
Sbjct: 399 TLVPPVYTVSQARGSSPVSLDLIIPFLRPGCCVLVWRSDVQFAWKHLLCPDVSYRHLGLL 458

Query: 541 LVWLACLLFAAALSLILLLKKDHAKGWLRLLKQDVRSGAAARGRAALLLYSADDSGFERL 600
           ++ L  LL    + L L  ++  +                   R  LLL++AD     RL
Sbjct: 459 ILALLALLTLLGVVLALTCRRPQS--------------GPGPARPVLLLHAADSEAQRRL 504

Query: 601 VGALASALCQL---PLRVAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAV 657
           VGALA  L         V VDLW  R ++  GP+ W  A R +  +E G V+LL+S   +
Sbjct: 505 VGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWLWAARTRVAREQGTVLLLWSGADL 564

Query: 658 ALCSEWLQDGVSGPGAHGPHDAFRASLSCVLPDFLQGRAPGSYVGACFDRLLHPDAVPAL 717
                     VSGP    P  A   +L    P  L        + A F RL     +P  
Sbjct: 565 R--------PVSGP---DPRAAPLLALLHAAPRPL-------LLLAYFSRLCAKGDIPPP 606

Query: 718 FRTVPVFTLPSQLPDFLGALQQ---PRAPRSGRLQERAEQVSR 757
            R +P + L   LP  L AL       A   GRL  R  + SR
Sbjct: 607 LRALPRYRLLRDLPRLLRALDARPFAEATSWGRLGARQRRQSR 649


>gi|193290182 interleukin 17 receptor E-like [Homo sapiens]
          Length = 336

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 22/175 (12%)

Query: 329 QIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLD 388
           Q + L ++  +PCLC++ W   PD+VR  ICPF  D  A + LW        + Q+   +
Sbjct: 166 QAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPES-QTLSWE 224

Query: 389 APCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVNSSEKL 448
             C +    +LCWR   G  C+     L   +  V + +++PL+   P LC++ ++S   
Sbjct: 225 PACPVSGHVSLCWRPGPGAGCR----KLQQSSQLVHRRVQYPLVDTQPQLCLKFSTS--- 277

Query: 449 QLQECLWADSLG-PLKDDVLLLETRGPQDNRSLCALEPSGC-TSLPSKASTRAAR 501
                 W   +  P +      + R P    S C     G  +SLP+ A +R AR
Sbjct: 278 ------WGSWVRCPFE------QRRFPTPPTSRCTCVTGGSHSSLPANAHSRPAR 320


>gi|23238208 interleukin 17A receptor precursor [Homo sapiens]
          Length = 866

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 22/198 (11%)

Query: 584 RAALLLYSADDSGFERLVGALAS-ALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTL 642
           R   ++YSAD   +  +V   A   L      VA+DL   + +S  G + W   Q+++ +
Sbjct: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437

Query: 643 QEGGVVVLLFSPGAVALCSEWLQDGVSGPGA-------HGPH--DAFRASLSCVLPDFLQ 693
           +    +++L S G  A   +W    + G GA       HG    D F A+++ +LPDF +
Sbjct: 438 ESNSKIIVLCSRGTRA---KW--QALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPDFKR 492

Query: 694 GRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAPRSGRLQERAE 753
               G+YV   F  +     VP LF   P + L  +  +    +Q     + GR+    E
Sbjct: 493 PACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLEMFQPGRMHRVGE 552

Query: 754 QVSRALQPALDSYFHPPG 771
                     D+Y   PG
Sbjct: 553 LSG-------DNYLRSPG 563


>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
          Length = 844

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 707 RLLHPDAVPALFRTVPVFTLPSQLPDFLGALQ-QPRAPRSGRLQERAEQVSRALQPALDS 765
           RL   D   +L   VP F + S  P+   A+   P AP S RL E+        QP L  
Sbjct: 595 RLSPVDFHYSLATQVPTFEITS--PNSAHAVSLPPAAPISYRLAEQ--------QPLL-- 642

Query: 766 YFHPPGTPAPGRGVGPGAGPGA 787
               P  P PG G GPG GPGA
Sbjct: 643 --RHPAPPGPGPGPGPGPGPGA 662


>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
          Length = 852

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 707 RLLHPDAVPALFRTVPVFTLPSQLPDFLGALQ-QPRAPRSGRLQERAEQVSRALQPALDS 765
           RL   D   +L   VP F + S  P+   A+   P AP S RL E+        QP L  
Sbjct: 603 RLSPVDFHYSLATQVPTFEITS--PNSAHAVSLPPAAPISYRLAEQ--------QPLL-- 650

Query: 766 YFHPPGTPAPGRGVGPGAGPGA 787
               P  P PG G GPG GPGA
Sbjct: 651 --RHPAPPGPGPGPGPGPGPGA 670


>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
          Length = 858

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 707 RLLHPDAVPALFRTVPVFTLPSQLPDFLGALQ-QPRAPRSGRLQERAEQVSRALQPALDS 765
           RL   D   +L   VP F + S  P+   A+   P AP S RL E+        QP L  
Sbjct: 609 RLSPVDFHYSLATQVPTFEITS--PNSAHAVSLPPAAPISYRLAEQ--------QPLL-- 656

Query: 766 YFHPPGTPAPGRGVGPGAGPGA 787
               P  P PG G GPG GPGA
Sbjct: 657 --RHPAPPGPGPGPGPGPGPGA 676


>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
          Length = 850

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 707 RLLHPDAVPALFRTVPVFTLPSQLPDFLGALQ-QPRAPRSGRLQERAEQVSRALQPALDS 765
           RL   D   +L   VP F + S  P+   A+   P AP S RL E+        QP L  
Sbjct: 601 RLSPVDFHYSLATQVPTFEITS--PNSAHAVSLPPAAPISYRLAEQ--------QPLL-- 648

Query: 766 YFHPPGTPAPGRGVGPGAGPGA 787
               P  P PG G GPG GPGA
Sbjct: 649 --RHPAPPGPGPGPGPGPGPGA 668


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 730 LPDFLGALQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPGAGD 789
           LPD L    Q + P  G  Q+          P L     PP   A G G GPG GPG G 
Sbjct: 196 LPDHLQMAVQGKRPMPGMQQQ---------MPTLP----PPSVSATGPGPGPGPGPGPGP 242

Query: 790 G 790
           G
Sbjct: 243 G 243


>gi|239756535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 13/17 (76%), Positives = 13/17 (76%)

Query: 770 PGTPAPGRGVGPGAGPG 786
           PG P  GRGVGPG GPG
Sbjct: 33  PGNPGEGRGVGPGHGPG 49


>gi|239751051 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 13/17 (76%), Positives = 13/17 (76%)

Query: 770 PGTPAPGRGVGPGAGPG 786
           PG P  GRGVGPG GPG
Sbjct: 33  PGNPGEGRGVGPGHGPG 49


>gi|239745492 PREDICTED: hypothetical protein XP_002343473 [Homo
           sapiens]
          Length = 90

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 13/17 (76%), Positives = 13/17 (76%)

Query: 770 PGTPAPGRGVGPGAGPG 786
           PG P  GRGVGPG GPG
Sbjct: 33  PGNPGEGRGVGPGHGPG 49


>gi|115511036 alpha-kinase 3 [Homo sapiens]
          Length = 1907

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query: 737 LQQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAG 784
           + +PR P   R  E  +QV+ A  PA++     P   A   G GPGAG
Sbjct: 135 VSKPRCPGRARPGEGQQQVTTARPPAINRGARQPRAGAAAAGRGPGAG 182


>gi|209862787 hypothetical protein LOC100191040 [Homo sapiens]
          Length = 353

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 22/100 (22%)

Query: 691 FLQGRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAPRSGR--- 747
           F + RAPG    AC   +L PD +P  F       +P +LPD  GA+   R   +GR   
Sbjct: 26  FSKRRAPGPPTSAC-PNVLTPDRIPQFF-------IPPRLPDPGGAVPAARRHVAGRGLP 77

Query: 748 ----LQERAEQVSRALQP------ALDSYFH-PPGTPAPG 776
               L   A +   A  P        +S FH PP  PA G
Sbjct: 78  ATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGG 117


>gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens]
          Length = 1179

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 738 QQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPG 786
           Q P+ P+S +LQ++ +Q  +  QP       P G P P R  G GAG G
Sbjct: 62  QLPQLPQSSQLQQQQQQQQQQQQPQPPQPPFPAGGP-PARRGGAGAGGG 109


>gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens]
          Length = 1192

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 738 QQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPG 786
           Q P+ P+S +LQ++ +Q  +  QP       P G P P R  G GAG G
Sbjct: 62  QLPQLPQSSQLQQQQQQQQQQQQPQPPQPPFPAGGP-PARRGGAGAGGG 109


>gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens]
          Length = 1203

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 738 QQPRAPRSGRLQERAEQVSRALQPALDSYFHPPGTPAPGRGVGPGAGPG 786
           Q P+ P+S +LQ++ +Q  +  QP       P G P P R  G GAG G
Sbjct: 62  QLPQLPQSSQLQQQQQQQQQQQQPQPPQPPFPAGGP-PARRGGAGAGGG 109


>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
          Length = 1060

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)

Query: 770 PGTPAPGRGVGPGAGPGAGDG 790
           P  P PG G GPG GPG G G
Sbjct: 334 PPMPGPGPGPGPGPGPGPGPG 354



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 14/21 (66%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 770 PGTPAPGRGVGPGAGPGAGDG 790
           PG P PG G GPG GPG G G
Sbjct: 337 PG-PGPGPGPGPGPGPGPGPG 356



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 14/21 (66%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 770 PGTPAPGRGVGPGAGPGAGDG 790
           PG P PG G GPG GPG G G
Sbjct: 339 PG-PGPGPGPGPGPGPGPGPG 358


>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
           sapiens]
          Length = 419

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 13/22 (59%), Positives = 13/22 (59%)

Query: 769 PPGTPAPGRGVGPGAGPGAGDG 790
           P G   PG G GPG GPG G G
Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGG 168


>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
          Length = 1962

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 44   EERLRVQFLAQQSLSLAPVTAATARTALSGLS--GADGRREERGRGKSWVCLSLGGSGNT 101
            +E   +QF++ QS+ L P  +A    AL  ++  G       R  G      S+ G GNT
Sbjct: 1285 DESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNP----SMFGVGNT 1340

Query: 102  EPQKKGLSCRLWDSDILCLPGDIVPAPGPVLAP 134
              Q +G+            P      P P+L+P
Sbjct: 1341 AAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSP 1373


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,438,411
Number of Sequences: 37866
Number of extensions: 1960523
Number of successful extensions: 6807
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6542
Number of HSP's gapped (non-prelim): 210
length of query: 791
length of database: 18,247,518
effective HSP length: 110
effective length of query: 681
effective length of database: 14,082,258
effective search space: 9590017698
effective search space used: 9590017698
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.