Search of human proteins with 24308456

Search of human proteins with 24308456

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308456 ELMO/CED-12 domain containing 2 [Homo sapiens]
         (293 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308456 ELMO/CED-12 domain containing 2 [Homo sapiens]            609   e-174
gi|194097484 ELMO/CED-12 domain containing 1 isoform 2 [Homo sap...   306   1e-83
gi|112181294 ELMO/CED-12 domain containing 1 isoform 1 [Homo sap...   303   9e-83
gi|203098650 ELMO/CED-12 domain containing 3 isoform b [Homo sap...    60   2e-09
gi|203098539 ELMO/CED-12 domain containing 3 isoform b [Homo sap...    60   2e-09
gi|203098474 ELMO/CED-12 domain containing 3 isoform b [Homo sap...    60   2e-09
gi|21362032 ELMO/CED-12 domain containing 3 isoform a [Homo sapi...    60   2e-09
gi|87298935 engulfment and cell motility 3 [Homo sapiens]              35   0.060
gi|19482174 cullin 2 [Homo sapiens]                                    35   0.078
gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens]    33   0.30 
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    32   0.51 
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    32   0.51 
gi|55770850 cytochrome P450 family 24 subfamily A polypeptide 1 ...    29   4.3  
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap...    29   4.3  
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap...    29   4.3  
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap...    29   4.3  
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap...    29   4.3  
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]     29   4.3  
gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]     29   4.3  
gi|222537750 ankyrin repeat domain 30B [Homo sapiens]                  29   5.6  
gi|22094987 raptor isoform 1 [Homo sapiens]                            29   5.6  
gi|251823858 raptor isoform 2 [Homo sapiens]                           29   5.6  

>gi|24308456 ELMO/CED-12 domain containing 2 [Homo sapiens]
          Length = 293

 Score =  609 bits (1570), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKNKVLQ 60
           MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKNKVLQ
Sbjct: 1   MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKNKVLQ 60

Query: 61  KATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPY 120
           KATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPY
Sbjct: 61  KATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPY 120

Query: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYF 180
           DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYF
Sbjct: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYF 180

Query: 181 SENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEH 240
           SENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEH
Sbjct: 181 SENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEH 240

Query: 241 FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVALTLKV 293
           FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVALTLKV
Sbjct: 241 FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVALTLKV 293


>gi|194097484 ELMO/CED-12 domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 326

 Score =  306 bits (785), Expect = 1e-83
 Identities = 156/307 (50%), Positives = 207/307 (67%), Gaps = 18/307 (5%)

Query: 1   MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVL 59
           M I +  +FY  F    +K+++R++TG+CELQRI ++T  GA RT +IE SL  SK+K+L
Sbjct: 7   MLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDSKSKLL 66

Query: 60  QKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRP 119
           Q +  V    ++K ++DIM+ K INP+ +    I ++ CLLQI GY+ L  DVE +R+  
Sbjct: 67  QTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVEKLRREA 126

Query: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179
           YDSDN QHEE+L+KLW  L P   L +RISKQW EIGFQGDDPKTDFRGMG+LGL NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186

Query: 180 FSENYTSEAHQILSRSNHPK-----------------LGYSYAIVGINLTEMAYSLLKSE 222
           F+E   + A Q+LS S HPK                 +GYS+AIVGIN+T++AY+LL S 
Sbjct: 187 FAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSG 246

Query: 223 ALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLL 282
           ALK H YN+ P  PT+ HF Q +CYL++EF KFW EE+P  IM FN  REKF ++I   L
Sbjct: 247 ALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRKRIIKQL 306

Query: 283 LDCNVAL 289
            + ++AL
Sbjct: 307 QNPDMAL 313


>gi|112181294 ELMO/CED-12 domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 334

 Score =  303 bits (777), Expect = 9e-83
 Identities = 156/315 (49%), Positives = 207/315 (65%), Gaps = 26/315 (8%)

Query: 1   MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVL 59
           M I +  +FY  F    +K+++R++TG+CELQRI ++T  GA RT +IE SL  SK+K+L
Sbjct: 7   MLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDSKSKLL 66

Query: 60  QKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRP 119
           Q +  V    ++K ++DIM+ K INP+ +    I ++ CLLQI GY+ L  DVE +R+  
Sbjct: 67  QTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVEKLRREA 126

Query: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179
           YDSDN QHEE+L+KLW  L P   L +RISKQW EIGFQGDDPKTDFRGMG+LGL NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186

Query: 180 FSENYTSEAHQILSRSNHPK-------------------------LGYSYAIVGINLTEM 214
           F+E   + A Q+LS S HPK                         +GYS+AIVGIN+T++
Sbjct: 187 FAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDL 246

Query: 215 AYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKF 274
           AY+LL S ALK H YN+ P  PT+ HF Q +CYL++EF KFW EE+P  IM FN  REKF
Sbjct: 247 AYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKF 306

Query: 275 HEKIKGLLLDCNVAL 289
            ++I   L + ++AL
Sbjct: 307 RKRIIKQLQNPDMAL 321


>gi|203098650 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY- 179
           DS +  H  +L  ++  L  +K   A     W ++GFQG +P TD RG G L L++L+Y 
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224

Query: 180 -FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTM 238
                    A +I   S H    + + ++ +N+T +A   L+ E L          IP +
Sbjct: 225 VMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVV 284

Query: 239 EHFH 242
             F+
Sbjct: 285 NSFY 288


>gi|203098539 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY- 179
           DS +  H  +L  ++  L  +K   A     W ++GFQG +P TD RG G L L++L+Y 
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224

Query: 180 -FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTM 238
                    A +I   S H    + + ++ +N+T +A   L+ E L          IP +
Sbjct: 225 VMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVV 284

Query: 239 EHFH 242
             F+
Sbjct: 285 NSFY 288


>gi|203098474 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY- 179
           DS +  H  +L  ++  L  +K   A     W ++GFQG +P TD RG G L L++L+Y 
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224

Query: 180 -FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTM 238
                    A +I   S H    + + ++ +N+T +A   L+ E L          IP +
Sbjct: 225 VMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVV 284

Query: 239 EHFH 242
             F+
Sbjct: 285 NSFY 288


>gi|21362032 ELMO/CED-12 domain containing 3 isoform a [Homo
           sapiens]
          Length = 391

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY- 179
           DS +  H  +L  ++  L  +K   A     W ++GFQG +P TD RG G L L++L+Y 
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224

Query: 180 -FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTM 238
                    A +I   S H    + + ++ +N+T +A   L+ E L          IP +
Sbjct: 225 VMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVV 284

Query: 239 EHFH 242
             F+
Sbjct: 285 NSFY 288


>gi|87298935 engulfment and cell motility 3 [Homo sapiens]
          Length = 773

 Score = 35.4 bits (80), Expect = 0.060
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)

Query: 149 SKQWAEIGFQGDDPKTDFRGM--GILGLINLVYFSENYTSEAHQIL--SRSNHPKLGYSY 204
           ++++ ++GF   +P  D   +  G+L L N++YFS N  S   + +  + S   K    +
Sbjct: 394 AREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPF 453

Query: 205 AIVGINLTEMAYSLLK-SEALKFHLYNLVPGIPTMEH-FHQFYCYLVYEFDKFWFE 258
           A   I LT +   LL+  E       +  P     +  FH+ +C  +   +K W E
Sbjct: 454 ARGSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKE 509


>gi|19482174 cullin 2 [Homo sapiens]
          Length = 745

 Score = 35.0 bits (79), Expect = 0.078
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 3   ISLWEFFYG-HFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKN----- 56
           + ++E FY  HF    + WL    TG+ ++  +   YV    T+++   L ++ +     
Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSY 596

Query: 57  KVLQKATHVVQSEVDKYVDDIMKEKNINPEKD 88
           K LQ +T + + E+ K +  ++  K IN + +
Sbjct: 597 KELQDSTQMNEKELTKTIKSLLDVKMINHDSE 628


>gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens]
          Length = 727

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 7/124 (5%)

Query: 142 KKLNARISKQWAEIGFQGD-DPKTDFRGM--GILGLINLVYFSENYTSEAHQIL--SRSN 196
           +K  +  ++ + ++GF    +P  DF     G+L L N++YF++++     +I+  + S 
Sbjct: 346 EKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSR 405

Query: 197 HPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYN-LVPGIPTMEH-FHQFYCYLVYEFDK 254
             K    +    I LT+M   +LK   L     N   P   T +  F +F+C  +   +K
Sbjct: 406 EDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNK 465

Query: 255 FWFE 258
            W E
Sbjct: 466 TWKE 469


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 12   HFFRFWMKWLLRQMTGKCELQRIFDTYVGA-QRTHRIENSLTYSKNKVLQKATHVVQSEV 70
            H  R W    LR    K E++   +T+V   ++   +   L   +NKVLQ A   ++  +
Sbjct: 5893 HLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCAWLVQMENKVLQTADISIEEMI 5952

Query: 71   DKYVDDIMKEKNINPEKDASFK 92
            +K   D M+E N+  E     K
Sbjct: 5953 EKLQKDCMEEINLFSENKLQLK 5974


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 12   HFFRFWMKWLLRQMTGKCELQRIFDTYVGA-QRTHRIENSLTYSKNKVLQKATHVVQSEV 70
            H  R W    LR    K E++   +T+V   ++   +   L   +NKVLQ A   ++  +
Sbjct: 5893 HLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCAWLVQMENKVLQTADISIEEMI 5952

Query: 71   DKYVDDIMKEKNINPEKDASFK 92
            +K   D M+E N+  E     K
Sbjct: 5953 EKLQKDCMEEINLFSENKLQLK 5974


>gi|55770850 cytochrome P450 family 24 subfamily A polypeptide 1
           isoform 1 precursor [Homo sapiens]
          Length = 514

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 55  KNKVLQKATHVVQSEVDKYVDD--------IMKEKNINPEKDASFKICMKMCLLQITGYK 106
           K  VL   T V+ S  D + D         + +++ INP     F +  +MC+ +     
Sbjct: 411 KGTVLMLNTQVLGSSEDNFEDSSQFRPERWLQEKEKINPFAHLPFGVGKRMCIGRRLAEL 470

Query: 107 QLYLDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKL 144
           QL+L +  +  R YD     +E + M     L+P+++L
Sbjct: 471 QLHLALCWI-VRKYDIQATDNEPVEMLHSGTLVPSREL 507


>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
           sapiens]
          Length = 436

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 28  KCELQRIFDTYVGAQRTHRIENSLTYS-KNKVLQKATHVVQSEV-------DKYVDDIMK 79
           K +LQ  FD    A  T ++E   ++S K ++L+KA     SE+        K ++D++ 
Sbjct: 196 KMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLS 255

Query: 80  EKNINPEK 87
           EK  + EK
Sbjct: 256 EKQESLEK 263


>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
          Length = 1270

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 28   KCELQRIFDTYVGAQRTHRIENSLTYS-KNKVLQKATHVVQSEV-------DKYVDDIMK 79
            K +LQ  FD    A  T ++E   ++S K ++L+KA     SE+        K ++D++ 
Sbjct: 1030 KMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLS 1089

Query: 80   EKNINPEK 87
            EK  + EK
Sbjct: 1090 EKQESLEK 1097


>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
          Length = 1216

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 28   KCELQRIFDTYVGAQRTHRIENSLTYS-KNKVLQKATHVVQSEV-------DKYVDDIMK 79
            K +LQ  FD    A  T ++E   ++S K ++L+KA     SE+        K ++D++ 
Sbjct: 976  KMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLS 1035

Query: 80   EKNINPEK 87
            EK  + EK
Sbjct: 1036 EKQESLEK 1043


>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
           sapiens]
          Length = 517

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 28  KCELQRIFDTYVGAQRTHRIENSLTYS-KNKVLQKATHVVQSEV-------DKYVDDIMK 79
           K +LQ  FD    A  T ++E   ++S K ++L+KA     SE+        K ++D++ 
Sbjct: 277 KMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLS 336

Query: 80  EKNINPEK 87
           EK  + EK
Sbjct: 337 EKQESLEK 344


>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
          Length = 902

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 169 MGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSE 222
           + +LG  N      N    +H++LS  N  K+  ++ + G+N  E+A  LL+S+
Sbjct: 90  LNLLGRCNYSQSERNLCKYSHEVLSEENF-KVLKNHELSGLNKEELAVLLLQSD 142


>gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]
          Length = 699

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 169 MGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSE 222
           + +LG  N      N    +H++LS  N  K+  ++ + G+N  E+A  LL+S+
Sbjct: 90  LNLLGRCNYSQSERNLCKYSHEVLSEENF-KVLKNHELSGLNKEELAVLLLQSD 142


>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
          Length = 1392

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 26/206 (12%)

Query: 30   ELQRIFDTYVGAQRTHRIENSLTYSKNKVLQKATHVVQSEV-----------DKYVDDIM 78
            EL+ +         TH  EN L + +N +L+K   +++ EV           +KY +DI 
Sbjct: 1059 ELKSVTSNLNQVSHTHESENDL-FHENCMLKKEIAMLKLEVATLKHQHQVKENKYFEDIK 1117

Query: 79   KEKNINPEKDASFKICMKMCLLQITGYKQ--LYLDVE-----SVRKRPYDSDNLQH--EE 129
              +  N E   + K+  K    + + Y++    L  E     S  K   D + L+   E 
Sbjct: 1118 ILQEKNAELQMTLKLKQKTVTKRASQYREQLKVLTAENTMLTSKLKEKQDKEILETEIES 1177

Query: 130  LLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAH 189
               +L + L    +       Q       GD P    +G+  + + N +Y +E      +
Sbjct: 1178 HHPRLASALQDHDQSVTSRKNQELAFHSAGDAP---LQGIMNVDVSNTIYNNEVLHQPLY 1234

Query: 190  QILSRSNHPKLGYSYAIVGINLTEMA 215
            +   +S  PK+  +YA  G +L E A
Sbjct: 1235 EAQRKSKSPKINLNYA--GDDLRENA 1258


>gi|22094987 raptor isoform 1 [Homo sapiens]
          Length = 1335

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 230  NLVPGIPTMEHFHQFY-CYLVYEFDK--FWFEEEPESIMYFNLYREKF-----HEKIKGL 281
            N  PG+P++  FH F  C  V + D   FW  E+ E + YF+    ++      E + G 
Sbjct: 1020 NRNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNG- 1078

Query: 282  LLDCNVALT 290
              DC++ LT
Sbjct: 1079 -QDCSLLLT 1086


>gi|251823858 raptor isoform 2 [Homo sapiens]
          Length = 1177

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 230 NLVPGIPTMEHFHQFY-CYLVYEFDK--FWFEEEPESIMYFNLYREKF-----HEKIKGL 281
           N  PG+P++  FH F  C  V + D   FW  E+ E + YF+    ++      E + G 
Sbjct: 862 NRNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNG- 920

Query: 282 LLDCNVALT 290
             DC++ LT
Sbjct: 921 -QDCSLLLT 928


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,750,675
Number of Sequences: 37866
Number of extensions: 446195
Number of successful extensions: 1195
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1172
Number of HSP's gapped (non-prelim): 29
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.