Search of human proteins with 242332514

Search of human proteins with 242332514

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|242332514 transmembrane protein 217 isoform 2 [Homo sapiens]
         (202 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|242332514 transmembrane protein 217 isoform 2 [Homo sapiens]       413   e-116
gi|31543076 transmembrane protein 217 isoform 1 [Homo sapiens]        411   e-115
gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens]       30   1.1  
gi|221139879 G protein-coupled receptor 63 [Homo sapiens]              28   5.3  
gi|13540557 G protein-coupled receptor 63 [Homo sapiens]               28   5.3  
gi|13376097 NIPA-like domain containing 2 [Homo sapiens]               28   6.9  
gi|40786408 SFT2 domain containing 2 [Homo sapiens]                    28   6.9  
gi|34916000 FERM domain containing 7 [Homo sapiens]                    27   9.0  
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ...    27   9.0  
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ...    27   9.0  

>gi|242332514 transmembrane protein 217 isoform 2 [Homo sapiens]
          Length = 202

 Score =  413 bits (1061), Expect = e-116
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 1   MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI 60
           MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI
Sbjct: 1   MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI 60

Query: 61  ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD 120
           ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD
Sbjct: 61  ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD 120

Query: 121 IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK 180
           IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK
Sbjct: 121 IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK 180

Query: 181 RLSISSGFSGSHLESQYFERQR 202
           RLSISSGFSGSHLESQYFERQR
Sbjct: 181 RLSISSGFSGSHLESQYFERQR 202


>gi|31543076 transmembrane protein 217 isoform 1 [Homo sapiens]
          Length = 229

 Score =  411 bits (1056), Expect = e-115
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI 60
           MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI
Sbjct: 1   MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI 60

Query: 61  ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD 120
           ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD
Sbjct: 61  ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD 120

Query: 121 IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK 180
           IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK
Sbjct: 121 IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK 180

Query: 181 RLSISSGFSGSHLESQYFERQ 201
           RLSISSGFSGSHLESQYFERQ
Sbjct: 181 RLSISSGFSGSHLESQYFERQ 201


>gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens]
          Length = 413

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 116 NNDFDIKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKN 156
           ++ F +KE + ++  G++  T   C+  FF++N  H+   N
Sbjct: 261 SSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN 301


>gi|221139879 G protein-coupled receptor 63 [Homo sapiens]
          Length = 419

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 39  NGSCTEITPKYRGASNIINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYI 98
           N +    TP    + N+     +      +LF+SF+  L+ C ++Y   A +   + I +
Sbjct: 62  NSTAVPTTPAAFKSLNLPLQITLSAIMIFILFVSFLGNLVVCLMVYQ-KAAMRSAINILL 120

Query: 99  VWIFFYETANVVIQILTNNDFDIKEVRIMRW-FG-LVSRTVMHCFWMFFV 146
             + F   A++++ +L N  F +  +   RW FG    R     FW+F +
Sbjct: 121 ASLAF---ADMLLAVL-NMPFALVTILTTRWIFGKFFCRVSAMFFWLFVI 166


>gi|13540557 G protein-coupled receptor 63 [Homo sapiens]
          Length = 419

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 39  NGSCTEITPKYRGASNIINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYI 98
           N +    TP    + N+     +      +LF+SF+  L+ C ++Y   A +   + I +
Sbjct: 62  NSTAVPTTPAAFKSLNLPLQITLSAIMIFILFVSFLGNLVVCLMVYQ-KAAMRSAINILL 120

Query: 99  VWIFFYETANVVIQILTNNDFDIKEVRIMRW-FG-LVSRTVMHCFWMFFV 146
             + F   A++++ +L N  F +  +   RW FG    R     FW+F +
Sbjct: 121 ASLAF---ADMLLAVL-NMPFALVTILTTRWIFGKFFCRVSAMFFWLFVI 166


>gi|13376097 NIPA-like domain containing 2 [Homo sapiens]
          Length = 368

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 52  ASNIINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVI 111
           ++  +  +++ W F I + L    ILI C LLY    +  + +VI +  +    +  V+ 
Sbjct: 169 SARTVQYYLVGWQFLIYVILE---ILIFCILLYFYKRKGMKHMVILLTLVAILASLTVI- 224

Query: 112 QILTNNDFDIKEVRIMRWFGLVSRTVM--HCFWMFFVINYAHITYK 155
                    +K V  M  F ++ +  +    F++ F+I  A   ++
Sbjct: 225 --------SVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQ 262


>gi|40786408 SFT2 domain containing 2 [Homo sapiens]
          Length = 160

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 51  GASNIINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFR-GLVIYIVWIFFYETANV 109
           G S ++    + WS +I  F++   I I C LL +V   + R GL ++ V+  F   A++
Sbjct: 18  GLSEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPRKGLHLFAVFYTFGNIASI 77


>gi|34916000 FERM domain containing 7 [Homo sapiens]
          Length = 714

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 11/82 (13%)

Query: 130 FGLVSRTVMHCFWMFFVINYAHITYKNR----------SQGNIISYKRRISTAEILHSRN 179
           F + SR     FW   V  +A                 S+G+   Y  R     + + R 
Sbjct: 256 FTMASRDACKAFWKTCVEYHAFFRLSEEPKSKPKTLLCSKGSSFRYSGRTQRQLLEYGRK 315

Query: 180 KRLSISSGFSGSHLESQYFERQ 201
            RL  S  F   H  SQY ERQ
Sbjct: 316 GRLK-SLPFERKHYPSQYHERQ 336


>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
           sapiens]
          Length = 391

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/57 (21%), Positives = 31/57 (54%)

Query: 55  IINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVI 111
           +I++ ++  +  +V+F+S I ++ S  ++ +    +   LV+ I  +    T+ VV+
Sbjct: 265 VISSLVVVIASLVVVFISLIVVISSLIVVITSLVVVITSLVVVITSLIVVITSLVVV 321


>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
           sapiens]
          Length = 398

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/57 (21%), Positives = 31/57 (54%)

Query: 55  IINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVI 111
           +I++ ++  +  +V+F+S I ++ S  ++ +    +   LV+ I  +    T+ VV+
Sbjct: 272 VISSLVVVIASLVVVFISLIVVISSLIVVITSLVVVITSLVVVITSLIVVITSLVVV 328


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.141    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,254,630
Number of Sequences: 37866
Number of extensions: 230495
Number of successful extensions: 664
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 14
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.