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Search of human proteins with 239758111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758111 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
(106 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758111 PREDICTED: similar to facioscapulohumeral muscular ... 228 8e-61
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 183 3e-47
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 183 3e-47
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 183 3e-47
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 183 3e-47
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 183 3e-47
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|194272172 double homeobox, 4 [Homo sapiens] 183 3e-47
gi|194272217 double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|194272216 double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|194272215 double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|194272192 double homeobox, 4-like [Homo sapiens] 183 3e-47
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 182 5e-47
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 159 6e-40
gi|239758001 PREDICTED: similar to facioscapulohumeral muscular ... 157 2e-39
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 156 3e-39
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa... 156 3e-39
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 154 1e-38
gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo ... 154 2e-38
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi... 152 7e-38
gi|207442678 double homeobox, 3 [Homo sapiens] 143 3e-35
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 143 3e-35
gi|207442670 double homeobox, 5 [Homo sapiens] 143 3e-35
gi|11120736 double homeobox, 1 [Homo sapiens] 143 3e-35
gi|61969662 double homeobox A [Homo sapiens] 65 2e-11
gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo ... 63 6e-11
gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo ... 63 6e-11
gi|4885363 goosecoid homeobox 2 [Homo sapiens] 61 2e-10
gi|122937484 dorsal root ganglia homeobox [Homo sapiens] 60 5e-10
>gi|239758111 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 106
Score = 228 bits (581), Expect = 8e-61
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ
Sbjct: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRSLH 106
PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRSLH
Sbjct: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRSLH 106
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 183 bits (464), Expect = 3e-47
Identities = 89/104 (85%), Positives = 94/104 (90%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT S
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGS 165
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 182 bits (462), Expect = 5e-47
Identities = 88/102 (86%), Positives = 93/102 (91%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSD TLPAEA+GRGRR+RL+WT SQSEALRACFERNPYP IATRERLAQAIGIP+
Sbjct: 62 MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVT 102
PRVQIWF NERSR LRQH+ ES PWPGRRG EGRRKRTAVT
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVT 163
Score = 57.8 bits (138), Expect = 2e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T Q+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 155 GRRKRTAVTGFQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 159 bits (401), Expect = 6e-40
Identities = 76/93 (81%), Positives = 82/93 (88%)
Query: 12 PAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNER 71
P ++GRGRR+RL+WT SQSE LRACFERNPYP IATRERLAQAIGIP+PRVQIWF NER
Sbjct: 150 PLTSRGRGRRRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNER 209
Query: 72 SRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
SR LRQH+ ES PWPGRRG QEGRRKRTAVT S
Sbjct: 210 SRQLRQHRRESRPWPGRRGLQEGRRKRTAVTGS 242
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+
Sbjct: 232 GRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 287
>gi|239758001 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 300
Score = 157 bits (396), Expect = 2e-39
Identities = 77/104 (74%), Positives = 85/104 (81%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTP DGT AEAQGRGRR+R++WT SQ EALRACFERNPY I TRE+LAQAIGI +
Sbjct: 95 MALPTPLDGTHTAEAQGRGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 154
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS LRQH+ +S PWPGR G EGRRK+T VT S
Sbjct: 155 PRVQIWFQNERSSQLRQHRQKSRPWPGRHGPPEGRRKQTTVTGS 198
Score = 52.4 bits (124), Expect = 8e-08
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRK+ T SQ+ FE++ +P IA +E LA+ +P+ R+QIWF N R+R+
Sbjct: 188 GRRKQTTVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARH 243
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 156 bits (395), Expect = 3e-39
Identities = 78/104 (75%), Positives = 83/104 (79%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTP TLP E+QGRG R+RL+WT S+SEALRACFE NPYP I T RLAQAIGI +
Sbjct: 1 MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS L Q Q ESWPWPGR GTQEGRRK TAVT S
Sbjct: 61 PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGS 104
Score = 52.4 bits (124), Expect = 8e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRK T SQ+ FE++ +P IA RE LA+ G+P+ R +IWF N R+R+
Sbjct: 94 GRRKPTAVTGSQTALYLQAFEKDRFPDIAAREELARETGLPESRSEIWFQNRRARH 149
>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 156 bits (395), Expect = 3e-39
Identities = 78/104 (75%), Positives = 83/104 (79%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTP TLP E+QGRG R+RL+WT S+SEALRACFE NPYP I T RLAQAIGI +
Sbjct: 1 MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS L Q Q ESWPWPGR GTQEGRRK TAVT S
Sbjct: 61 PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGS 104
Score = 52.4 bits (124), Expect = 8e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GRRK T SQ+ FE++ +P IA RE LA+ G+P+ R +IWF N R+R+
Sbjct: 94 GRRKPTAVTGSQTALYLQAFEKDRFPDIAAREELARETGLPESRSEIWFQNRRARH 149
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 154 bits (390), Expect = 1e-38
Identities = 77/104 (74%), Positives = 84/104 (80%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSDGT AEAQG GRR+R++WT SQ EALRACFERNPY I TRE+LAQAIGI +
Sbjct: 95 MALPTPSDGTHTAEAQGSGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 154
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRV IWF NERS LRQH+ +S PWPGR G EGR KRTAVT S
Sbjct: 155 PRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGRGKRTAVTGS 198
Score = 51.2 bits (121), Expect = 2e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GR KR T SQ+ FE++ +P IA +E LA+ +P+ R+QIWF N R+R+
Sbjct: 188 GRGKRTAVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARH 243
>gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo
sapiens]
Length = 236
Score = 154 bits (388), Expect = 2e-38
Identities = 77/104 (74%), Positives = 84/104 (80%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSDGT AEAQG GRR+R++WT SQ EALRACFERNPY I TRE+LAQAIGI +
Sbjct: 39 MALPTPSDGTHTAEAQGWGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 98
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRV IWF NERS LRQH+ +S PWPGR G EGR KRTAVT S
Sbjct: 99 PRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGRGKRTAVTGS 142
Score = 51.2 bits (121), Expect = 2e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 19 GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
GR KR T SQ+ FE++ +P IA +E LA+ +P+ R+QIWF N R+R+
Sbjct: 132 GRGKRTAVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARH 187
>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 479
Score = 152 bits (383), Expect = 7e-38
Identities = 77/104 (74%), Positives = 86/104 (82%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MA PTPSDGTL AEAQG G R+RL+WT SQS AL+AC+ERNPY IATRERLAQAI I +
Sbjct: 58 MAFPTPSDGTLTAEAQGWGLRRRLVWTPSQSXALQACYERNPYLGIATRERLAQAIVILE 117
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERSR LRQH+ +S PWPGRRG +E +KRTAVT S
Sbjct: 118 PRVQIWFQNERSRQLRQHRRDSRPWPGRRGLKEVWQKRTAVTGS 161
Score = 50.1 bits (118), Expect = 4e-07
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 21 RKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
+KR T S++ L FE++ + IATRE LA+ G P+ R+QIWF N R+R+
Sbjct: 153 QKRTAVTGSRTYLLLRAFEKDRFTGIATREELARETGTPESRIQIWFQNRRARH 206
>gi|207442678 double homeobox, 3 [Homo sapiens]
Length = 197
Score = 143 bits (361), Expect = 3e-35
Identities = 74/104 (71%), Positives = 82/104 (78%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MAL T D TLP EAQG GRR LL T SQS+ALRACFERN YP IAT+E+LAQ I IP+
Sbjct: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS LRQH+ +S PWPGRR Q+GRRKRTA+T S
Sbjct: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGS 131
Score = 60.8 bits (146), Expect = 2e-10
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 18 RGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQ 77
+GRRKR T SQ+ L FE++ +P I RE LA+ G+P+ R+Q+WF N R+R+
Sbjct: 120 KGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARH--- 176
Query: 78 HQWESWPWPGRRGTQEGRRKRTA 100
W GR TQ R A
Sbjct: 177 -----WGQSGRAPTQASIRCNAA 194
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 143 bits (360), Expect = 3e-35
Identities = 74/104 (71%), Positives = 83/104 (79%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MALPTPSDGTLPAEA GRGRR+RL+W+ +S+AL A E+NPY IATRERL +AI IP+
Sbjct: 1 MALPTPSDGTLPAEAWGRGRRRRLVWSPXESQALGASVEQNPYLGIATRERLTRAIVIPE 60
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
RVQI F NERSR LRQH+WES P P R QEGRRKRTAVT S
Sbjct: 61 SRVQICFQNERSRQLRQHRWESRPRPRRCAPQEGRRKRTAVTGS 104
Score = 59.3 bits (142), Expect = 6e-10
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 15 AQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY 74
A GRRKR T SQ+ L FE++ +P IATRE LA+ G+P R+Q+WF N R+R+
Sbjct: 90 APQEGRRKRTAVTGSQTTLLLRAFEKDRFPGIATREELARETGLPASRIQMWFPNRRARH 149
>gi|207442670 double homeobox, 5 [Homo sapiens]
Length = 197
Score = 143 bits (360), Expect = 3e-35
Identities = 74/104 (71%), Positives = 81/104 (77%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MAL T D TLP EAQG GRR LL T SQS+ALRACFERN YP IAT+E LAQ I IP+
Sbjct: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 87
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS LRQH+ +S PWPGRR Q+GRRKRTA+T S
Sbjct: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGS 131
Score = 61.2 bits (147), Expect = 2e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 18 RGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQ 77
+GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+ Q
Sbjct: 120 KGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQ 179
>gi|11120736 double homeobox, 1 [Homo sapiens]
Length = 170
Score = 143 bits (360), Expect = 3e-35
Identities = 74/104 (71%), Positives = 81/104 (77%)
Query: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
MAL T D TLP EAQG GRR LL T SQS+ALRACFERN YP IAT+E LAQ I IP+
Sbjct: 1 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
Query: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
PRVQIWF NERS LRQH+ +S PWPGRR Q+GRRKRTA+T S
Sbjct: 61 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGS 104
Score = 61.2 bits (147), Expect = 2e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 18 RGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQ 77
+GRRKR T SQ+ L FE++ +P IA RE LA+ G+P+ R+QIWF N R+R+ Q
Sbjct: 93 KGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQ 152
>gi|61969662 double homeobox A [Homo sapiens]
Length = 204
Score = 64.7 bits (156), Expect = 2e-11
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 14 EAQGR-GRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERS 72
E Q R RR R ++ SQ L F +NPYP I +RE LA+ IG+P+ RVQIWF N RS
Sbjct: 95 EFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRS 154
Query: 73 RYLRQHQWE 81
R L Q + E
Sbjct: 155 RLLLQRKRE 163
Score = 49.7 bits (117), Expect = 5e-07
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 20 RRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRY----- 74
RR R +T Q + L F + PYP AT+++LA I + R+QIWF N R+R+
Sbjct: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
Query: 75 -----LRQHQWESWPWPG-RRGTQEGRRKRTAVTRS 104
L Q + PG ++E RR RT + S
Sbjct: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSAS 111
>gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo
sapiens]
Length = 345
Score = 62.8 bits (151), Expect = 6e-11
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 11 LPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNE 70
LP EA R+K+ T +Q L FERNP+P IATR++LA+ G+ + R+Q+WF +
Sbjct: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
Query: 71 RSRYLRQHQWE 81
RS YL++ + E
Sbjct: 154 RSLYLKKSRME 164
Score = 53.1 bits (126), Expect = 5e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 8 DGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWF 67
+GT Q R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+P+ +Q+WF
Sbjct: 4 EGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWF 63
Query: 68 HNER 71
N R
Sbjct: 64 KNYR 67
>gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
sapiens]
Length = 345
Score = 62.8 bits (151), Expect = 6e-11
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 11 LPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNE 70
LP EA R+K+ T +Q L FERNP+P IATR++LA+ G+ + R+Q+WF +
Sbjct: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
Query: 71 RSRYLRQHQWE 81
RS YL++ + E
Sbjct: 154 RSLYLKKSRME 164
Score = 53.1 bits (126), Expect = 5e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 8 DGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWF 67
+GT Q R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+P+ +Q+WF
Sbjct: 4 EGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWF 63
Query: 68 HNER 71
N R
Sbjct: 64 KNYR 67
>gi|4885363 goosecoid homeobox 2 [Homo sapiens]
Length = 205
Score = 60.8 bits (146), Expect = 2e-10
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 1 MALPTPSDGTLPAE----AQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAI 56
+ P G LP +Q R RR R +++ Q +AL A F +N YP ++TRERLA I
Sbjct: 104 LGAPAGGSGALPGAVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRI 163
Query: 57 GIPQPRVQIWFHNERSRYLRQ 77
+ + RV++WF N R+++ Q
Sbjct: 164 RLREERVEVWFKNRRAKWRHQ 184
>gi|122937484 dorsal root ganglia homeobox [Homo sapiens]
Length = 268
Score = 59.7 bits (143), Expect = 5e-10
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 20 RRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQHQ 79
RR R +TL Q EAL A F + YP + TRE LA I + + RVQ+WF N R+++ + +
Sbjct: 39 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 98
Query: 80 WESWPWPGRR 89
S PG +
Sbjct: 99 GASDQEPGAK 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,801,183
Number of Sequences: 37866
Number of extensions: 209895
Number of successful extensions: 899
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 569
Number of HSP's gapped (non-prelim): 342
length of query: 106
length of database: 18,247,518
effective HSP length: 76
effective length of query: 30
effective length of database: 15,369,702
effective search space: 461091060
effective search space used: 461091060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.