Search of human proteins with 239757907

Search of human proteins with 239757907

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757907 PREDICTED: similar to translocase of inner
mitochondrial membrane 8 homolog B (yeast) [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757907 PREDICTED: similar to translocase of inner mitochon...   283   3e-77
gi|239752419 PREDICTED: similar to translocase of inner mitochon...   228   9e-61
gi|239746934 PREDICTED: similar to translocase of inner mitochon...   228   9e-61
gi|6912712 translocase of inner mitochondrial membrane 8 homolog...   157   3e-39
gi|4758152 translocase of inner mitochondrial membrane 8 homolog...    74   4e-14
gi|11024700 translocase of inner mitochondrial membrane 13 [Homo...    40   6e-04
gi|225543159 translocase of inner mitochondrial membrane 8 homol...    33   0.055
gi|6912382 fractured callus expressed transcript 1 [Homo sapiens]      31   0.36 
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s...    28   2.3  
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]       27   5.1  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     26   8.8  
gi|87116668 hypothetical protein LOC9870 [Homo sapiens]                26   8.8  
gi|14149738 neurolysin [Homo sapiens]                                  26   8.8  
gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]           26   8.8  

>gi|239757907 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B (yeast) [Homo
           sapiens]
          Length = 136

 Score =  283 bits (724), Expect = 3e-77
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEA 60
           MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLR TKAELGEA
Sbjct: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEA 60

Query: 61  DGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 120
           DGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT
Sbjct: 61  DGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 120

Query: 121 LAITSRFAQIVQKGGQ 136
           LAITSRFAQIVQKGGQ
Sbjct: 121 LAITSRFAQIVQKGGQ 136


>gi|239752419 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B [Homo sapiens]
          Length = 116

 Score =  228 bits (582), Expect = 9e-61
 Identities = 115/136 (84%), Positives = 115/136 (84%), Gaps = 20/136 (14%)

Query: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEA 60
           MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELT                    AELGEA
Sbjct: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELT--------------------AELGEA 40

Query: 61  DGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 120
           DGAE QHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT
Sbjct: 41  DGAELQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 100

Query: 121 LAITSRFAQIVQKGGQ 136
           LAITSRFAQIVQKGGQ
Sbjct: 101 LAITSRFAQIVQKGGQ 116


>gi|239746934 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B [Homo sapiens]
          Length = 116

 Score =  228 bits (582), Expect = 9e-61
 Identities = 115/136 (84%), Positives = 115/136 (84%), Gaps = 20/136 (14%)

Query: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEA 60
           MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELT                    AELGEA
Sbjct: 1   MNAHTDDLGKPWDIKLPSEPKIEIIPGSASTELT--------------------AELGEA 40

Query: 61  DGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 120
           DGAE QHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT
Sbjct: 41  DGAELQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTT 100

Query: 121 LAITSRFAQIVQKGGQ 136
           LAITSRFAQIVQKGGQ
Sbjct: 101 LAITSRFAQIVQKGGQ 116


>gi|6912712 translocase of inner mitochondrial membrane 8 homolog B
           [Homo sapiens]
          Length = 83

 Score =  157 bits (396), Expect = 3e-39
 Identities = 77/82 (93%), Positives = 77/82 (93%)

Query: 55  AELGEADGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVD 114
           AELGEAD AE Q LVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDS TENCLSSCVD
Sbjct: 2   AELGEADEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSRTENCLSSCVD 61

Query: 115 HFIDTTLAITSRFAQIVQKGGQ 136
            FIDTTLAITSRFAQIVQKGGQ
Sbjct: 62  RFIDTTLAITSRFAQIVQKGGQ 83


>gi|4758152 translocase of inner mitochondrial membrane 8 homolog A
           isoform 1 [Homo sapiens]
          Length = 97

 Score = 73.9 bits (180), Expect = 4e-14
 Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 55  AELGEADGAESQHLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSCTENCLSSCVD 114
           A LG  D  + QH +  E QK +F   VH   ELCW+KC++KPG +LDS  E C  +CV+
Sbjct: 10  AGLGAVD-PQLQHFIEVETQKQRFQQLVHQMTELCWEKCMDKPGPKLDSRAEACFVNCVE 68

Query: 115 HFIDTTLAITSRFAQ 129
            FIDT+  I +R  Q
Sbjct: 69  RFIDTSQFILNRLEQ 83


>gi|11024700 translocase of inner mitochondrial membrane 13 [Homo
           sapiens]
          Length = 95

 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 72  EQQKAQFTAQ-----VHHFMELCWDKCVEKPGNRLDSCTENCLSSCVDHFIDTTLAITSR 126
           EQ K Q         +    + C+ KC+ KPG  LD+  + C++ C+D ++D    ++  
Sbjct: 24  EQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQKCIAMCMDRYMDAWNTVSRA 83

Query: 127 FAQIVQK 133
           +   +Q+
Sbjct: 84  YNSRLQR 90


>gi|225543159 translocase of inner mitochondrial membrane 8
          homolog A isoform 2 [Homo sapiens]
          Length = 48

 Score = 33.5 bits (75), Expect = 0.055
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 55 AELGEADGAESQHLVAAEQQKAQFTAQVHHFMELCW 90
          A LG  D  + QH +  E QK +F   VH   ELCW
Sbjct: 10 AGLGAVD-PQLQHFIEVETQKQRFQQLVHQMTELCW 44


>gi|6912382 fractured callus expressed transcript 1 [Homo sapiens]
          Length = 103

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 72  EQQKAQFTAQVHHFM-------ELCWDKCVEKPGNR-LDSCTENCLSSCVDHFIDTTLAI 123
           +QQ+ Q    +  F+       ELC+ +CV    +R LD+  E CL SC    I +   +
Sbjct: 4   QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63

Query: 124 TSRFAQIV 131
            + + Q++
Sbjct: 64  MAAYVQLM 71


>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1052

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 26  PGSASTELTTNDFNAKHLKNYWISLRXTKAELGEADGAESQHLVAAEQQKAQFTAQV 82
           P S   EL   + +A  L+     ++  + +LGE    +++HL AA QQ  Q TAQ+
Sbjct: 408 PQSIFKELNNENKSALQLEQ---QVKELQEKLGEVK--DTEHLEAASQQNQQLTAQL 459


>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
          Length = 526

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 11 PWDIKLPSEPKIEIIPGSASTELTTN-DFNAKHLKNYWISLRXTKAELGEADGAESQ 66
          P+D+  P EP + ++   A      + + +A+HL+  W   + + A L   DG E +
Sbjct: 28 PFDVIGPPEPILAVVGEDAELPCRLSPNASAEHLELRWFRKKVSPAVLVHRDGREQE 84


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 50  LRXTKAELGEADGAESQHLVAAEQQKAQFTAQVHHFMELCWD 91
           L   K +L E   AE++    AE+ +A+ TA+     E+C D
Sbjct: 878 LMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHD 919


>gi|87116668 hypothetical protein LOC9870 [Homo sapiens]
          Length = 823

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 14/73 (19%), Positives = 30/73 (41%)

Query: 22  IEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEADGAESQHLVAAEQQKAQFTAQ 81
           ++I+P       T N  + +   NY +S+     +  E+ G   +  V + +Q  Q   +
Sbjct: 187 LQIVPRDEYDNPTNNSMSLRDEHNYTLSIHELGPQEEESTGVSFEKSVTSNRQTFQVFLR 246

Query: 82  VHHFMELCWDKCV 94
           +      C+  C+
Sbjct: 247 LTLHSRGCFHACI 259


>gi|14149738 neurolysin [Homo sapiens]
          Length = 704

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 8   LGKPWDIKLPSEPKIEIIPGSASTELTTNDFNAKHLKNYWISLRXTKAELGEADGAESQH 67
           +GK   + LP + + EI            DFN K+L      L  +KAELG         
Sbjct: 172 MGKRNGLHLPEQVQNEIKSMKKRMSELCIDFN-KNLNEDDTFLVFSKAELGALPDDFIDS 230

Query: 68  LVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLD 102
           L   +  K + T +  H+  +    C+ +   R++
Sbjct: 231 LEKTDDDKYKITLKYPHYFPVMKKCCIPETRRRME 265


>gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]
          Length = 1564

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 41 KHLKNYWISLRXTKAELGEADGAESQHLVAAEQQKAQFTA 80
          K+  N W+ +    AEL + D A+S +  AAE +  Q  A
Sbjct: 37 KNNYNAWVFIGVAAAELEQPDQAQSAYKKAAELEPDQLLA 76


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,341,931
Number of Sequences: 37866
Number of extensions: 201909
Number of successful extensions: 489
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 476
Number of HSP's gapped (non-prelim): 14
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.