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Search of human proteins with 239756165
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756165 PREDICTED: hypothetical protein [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756165 PREDICTED: hypothetical protein [Homo sapiens] 548 e-156
gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo ... 442 e-124
gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo ... 441 e-124
gi|146134388 YLP motif containing 1 [Homo sapiens] 33 0.34
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 30 1.7
gi|38679909 testis expressed sequence 2 [Homo sapiens] 30 2.9
gi|24308354 hypothetical protein LOC89927 isoform 1 [Homo sapiens] 29 4.9
gi|239756735 PREDICTED: similar to Os05g0242100 isoform 2 [Homo ... 28 6.5
gi|239756733 PREDICTED: similar to Os05g0242100 [Homo sapiens] 28 6.5
gi|239756731 PREDICTED: similar to Os05g0242100 [Homo sapiens] 28 6.5
gi|239751234 PREDICTED: hypothetical protein isoform 2 [Homo sap... 28 6.5
gi|239751232 PREDICTED: hypothetical protein [Homo sapiens] 28 6.5
gi|239751230 PREDICTED: hypothetical protein [Homo sapiens] 28 6.5
gi|239745727 PREDICTED: similar to Os05g0242100 isoform 2 [Homo ... 28 6.5
gi|239745725 PREDICTED: similar to Os05g0242100 [Homo sapiens] 28 6.5
gi|239745723 PREDICTED: similar to Os05g0242100 [Homo sapiens] 28 6.5
gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo... 28 8.4
gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo... 28 8.4
>gi|239756165 PREDICTED: hypothetical protein [Homo sapiens]
Length = 270
Score = 548 bits (1412), Expect = e-156
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MNSVAPSYPTGRVEVKPLRVQGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPL 60
MNSVAPSYPTGRVEVKPLRVQGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPL
Sbjct: 1 MNSVAPSYPTGRVEVKPLRVQGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPL 60
Query: 61 SLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSHNAEGAQC 120
SLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSHNAEGAQC
Sbjct: 61 SLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSHNAEGAQC 120
Query: 121 KLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDAGC 180
KLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDAGC
Sbjct: 121 KLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDAGC 180
Query: 181 RSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASNLTQITVL 240
RSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASNLTQITVL
Sbjct: 181 RSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASNLTQITVL 240
Query: 241 SISTRNIQHFSPSSQRMGSVYTECHLKHPH 270
SISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 241 SISTRNIQHFSPSSQRMGSVYTECHLKHPH 270
>gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo
sapiens]
Length = 217
Score = 442 bits (1138), Expect = e-124
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 54 MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 113
MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH
Sbjct: 1 MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60
Query: 114 NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 173
NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS
Sbjct: 61 NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120
Query: 174 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 233
PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN
Sbjct: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180
Query: 234 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 270
LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 181 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217
>gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo
sapiens]
Length = 217
Score = 441 bits (1133), Expect = e-124
Identities = 216/217 (99%), Positives = 216/217 (99%)
Query: 54 MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 113
MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH
Sbjct: 1 MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60
Query: 114 NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 173
NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS
Sbjct: 61 NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120
Query: 174 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 233
PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN
Sbjct: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180
Query: 234 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 270
LTQIT LSISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 181 LTQITFLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 32.7 bits (73), Expect = 0.34
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 2 NSVAPSYPTGRVEVKPLRVQGHRPEKPFSSHLLSREGPEILG 43
+S APS P V+ P+R G P+ P SS+L S GP G
Sbjct: 723 SSAAPSQPITAVKDMPVRSGGLLPDPPRSSYLESPRGPRFDG 764
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2
[Homo sapiens]
Length = 581
Score = 30.4 bits (67), Expect = 1.7
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 116 EGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSI--FLQKLREVTSPSSPLAS 173
EGA K+P LL+G AE+++ A+F + KD+++ P F+ +L P A+
Sbjct: 125 EGAGSKVPRCLLLGTDMAENQKQIAQFSQ---KDAQVFPKYEEFMHRLALAIDPLLD-AA 180
Query: 174 PSTDAGCRSFFLLPRHRGL 192
P A + LL R R L
Sbjct: 181 PVDMAAFQHGSLLQRMRSL 199
>gi|38679909 testis expressed sequence 2 [Homo sapiens]
Length = 1134
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 127 LVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLR-------EVTSPSSPLASPSTDAG 179
LV ++ R ++ K DSKL +F Q + T+PSSPL SPS
Sbjct: 217 LVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPS---D 273
Query: 180 CRSFFLLP 187
RSFF +P
Sbjct: 274 TRSFFKVP 281
>gi|24308354 hypothetical protein LOC89927 isoform 1 [Homo
sapiens]
Length = 204
Score = 28.9 bits (63), Expect = 4.9
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 16 KPLRVQGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLSLTHVEKMDEIKI 73
KPLR G E + + L R +I+ +AE +P E+ L + ++++ E+ +
Sbjct: 15 KPLRRYGAVEETAWKTERLGRNQLDIISMAETTMMPEEIE----LEMAKIQRLREVLV 68
>gi|239756735 PREDICTED: similar to Os05g0242100 isoform 2 [Homo
sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239756733 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239756731 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239751234 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239751232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239751230 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239745727 PREDICTED: similar to Os05g0242100 isoform 2 [Homo
sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239745725 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|239745723 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 21 QGHRPEKPFSSHLLSREGPEILGLAELAFLPREMRKISPLS 61
QGH+ +H P+ GLAE F+ R +R +SPL+
Sbjct: 264 QGHK-----QAHPTKPTAPKCSGLAERKFMQRVLRHLSPLT 299
>gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo
sapiens]
Length = 581
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 134 ESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDA 178
E ++ AE EK KD KLQ L+ L+E S +S L + + D+
Sbjct: 445 EYKKKEAELEK--LKDDKLQVEKMLENLKEKESCASRLCASNQDS 487
>gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo
sapiens]
Length = 610
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 134 ESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDA 178
E ++ AE EK KD KLQ L+ L+E S +S L + + D+
Sbjct: 474 EYKKKEAELEK--LKDDKLQVEKMLENLKEKESCASRLCASNQDS 516
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,748,511
Number of Sequences: 37866
Number of extensions: 483412
Number of successful extensions: 1132
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1127
Number of HSP's gapped (non-prelim): 19
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.