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Search of human proteins with 239754143
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754143 PREDICTED: similar to cytochrome c oxidase subunit
II [Homo sapiens]
(64 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754143 PREDICTED: similar to cytochrome c oxidase subunit ... 124 2e-29
gi|239748610 PREDICTED: hypothetical protein XP_002346731 [Homo ... 124 2e-29
gi|239742628 PREDICTED: hypothetical protein XP_002342599 [Homo ... 124 2e-29
gi|239755520 PREDICTED: similar to Cytochrome c oxidase subunit ... 102 7e-23
gi|239750010 PREDICTED: hypothetical protein XP_002347252 [Homo ... 102 7e-23
gi|239744323 PREDICTED: hypothetical protein XP_002343117 [Homo ... 102 7e-23
gi|239753397 PREDICTED: similar to Cytochrome c oxidase subunit ... 99 6e-22
gi|239747968 PREDICTED: hypothetical protein XP_002346519 [Homo ... 99 6e-22
gi|239741863 PREDICTED: hypothetical protein XP_002342327 [Homo ... 99 6e-22
gi|239755319 PREDICTED: similar to cytochrome c oxidase subunit ... 98 2e-21
gi|239749812 PREDICTED: hypothetical protein XP_002347169 [Homo ... 98 2e-21
gi|239744102 PREDICTED: hypothetical protein XP_002343062 [Homo ... 98 2e-21
gi|239753932 PREDICTED: similar to Cytochrome c oxidase subunit ... 91 3e-19
gi|239748474 PREDICTED: similar to Cytochrome c oxidase subunit ... 91 3e-19
gi|239742438 PREDICTED: hypothetical protein XP_002342515 [Homo ... 91 3e-19
gi|239754134 PREDICTED: similar to Cytochrome c oxidase subunit ... 84 2e-17
gi|239742635 PREDICTED: hypothetical protein XP_002342601 [Homo ... 84 2e-17
gi|251831110 cytochrome c oxidase subunit II [Homo sapiens] 83 4e-17
gi|196123582 cytochrome c oxidase subunit II [Homo sapiens neand... 82 9e-17
gi|239752847 PREDICTED: hypothetical protein XP_002345402 [Homo ... 77 2e-15
gi|239747402 PREDICTED: hypothetical protein XP_002346644 [Homo ... 77 2e-15
gi|239741228 PREDICTED: hypothetical protein XP_002342139 [Homo ... 77 2e-15
gi|239753950 PREDICTED: similar to cytochrome c oxidase subunit ... 67 2e-12
gi|239748490 PREDICTED: hypothetical protein XP_002346674 [Homo ... 67 2e-12
gi|239742454 PREDICTED: hypothetical protein XP_002342519 [Homo ... 67 2e-12
gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo ... 64 2e-11
gi|239747883 PREDICTED: hypothetical protein [Homo sapiens] 64 3e-11
gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo ... 64 3e-11
gi|239757854 PREDICTED: hypothetical protein [Homo sapiens] 58 2e-09
gi|52317176 olfactory receptor, family 10, subfamily K, member 2... 26 6.0
>gi|239754143 PREDICTED: similar to cytochrome c oxidase subunit
II [Homo sapiens]
Length = 64
Score = 124 bits (311), Expect = 2e-29
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE
Sbjct: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239748610 PREDICTED: hypothetical protein XP_002346731 [Homo
sapiens]
Length = 64
Score = 124 bits (311), Expect = 2e-29
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE
Sbjct: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239742628 PREDICTED: hypothetical protein XP_002342599 [Homo
sapiens]
Length = 64
Score = 124 bits (311), Expect = 2e-29
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE
Sbjct: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239755520 PREDICTED: similar to Cytochrome c oxidase subunit 2
[Homo sapiens]
Length = 64
Score = 102 bits (254), Expect = 7e-23
Identities = 54/64 (84%), Positives = 55/64 (85%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDA SPIIEELLTFH HALIII LISSLVLY ISLIL T LTH S I AQE
Sbjct: 1 MAHPVQLGLQDATSPIIEELLTFHGHALIIILLISSLVLYVISLILTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IKTV 64
>gi|239750010 PREDICTED: hypothetical protein XP_002347252 [Homo
sapiens]
Length = 64
Score = 102 bits (254), Expect = 7e-23
Identities = 54/64 (84%), Positives = 55/64 (85%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDA SPIIEELLTFH HALIII LISSLVLY ISLIL T LTH S I AQE
Sbjct: 1 MAHPVQLGLQDATSPIIEELLTFHGHALIIILLISSLVLYVISLILTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IKTV 64
>gi|239744323 PREDICTED: hypothetical protein XP_002343117 [Homo
sapiens]
Length = 64
Score = 102 bits (254), Expect = 7e-23
Identities = 54/64 (84%), Positives = 55/64 (85%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHPVQLGLQDA SPIIEELLTFH HALIII LISSLVLY ISLIL T LTH S I AQE
Sbjct: 1 MAHPVQLGLQDATSPIIEELLTFHGHALIIILLISSLVLYVISLILTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IKTV 64
>gi|239753397 PREDICTED: similar to Cytochrome c oxidase subunit 2
[Homo sapiens]
Length = 64
Score = 99.4 bits (246), Expect = 6e-22
Identities = 53/64 (82%), Positives = 54/64 (84%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MA+PVQLGLQD SPIIEELLTFHDHALIIIFLISSLVL ISLIL T LTH I AQE
Sbjct: 1 MAYPVQLGLQDTTSPIIEELLTFHDHALIIIFLISSLVLDIISLILTTKLTHTGTIDAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239747968 PREDICTED: hypothetical protein XP_002346519 [Homo
sapiens]
Length = 64
Score = 99.4 bits (246), Expect = 6e-22
Identities = 53/64 (82%), Positives = 54/64 (84%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MA+PVQLGLQD SPIIEELLTFHDHALIIIFLISSLVL ISLIL T LTH I AQE
Sbjct: 1 MAYPVQLGLQDTTSPIIEELLTFHDHALIIIFLISSLVLDIISLILTTKLTHTGTIDAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239741863 PREDICTED: hypothetical protein XP_002342327 [Homo
sapiens]
Length = 64
Score = 99.4 bits (246), Expect = 6e-22
Identities = 53/64 (82%), Positives = 54/64 (84%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MA+PVQLGLQD SPIIEELLTFHDHALIIIFLISSLVL ISLIL T LTH I AQE
Sbjct: 1 MAYPVQLGLQDTTSPIIEELLTFHDHALIIIFLISSLVLDIISLILTTKLTHTGTIDAQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239755319 PREDICTED: similar to cytochrome c oxidase subunit
II [Homo sapiens]
Length = 64
Score = 97.8 bits (242), Expect = 2e-21
Identities = 51/64 (79%), Positives = 52/64 (81%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHP QLGLQDA SPIIEELL FHDH LIIIFLISSLVLY ISLIL T L H S AQE
Sbjct: 1 MAHPFQLGLQDATSPIIEELLHFHDHTLIIIFLISSLVLYIISLILTTKLMHTSTTDAQE 60
Query: 61 IETV 64
+ETV
Sbjct: 61 VETV 64
>gi|239749812 PREDICTED: hypothetical protein XP_002347169 [Homo
sapiens]
Length = 64
Score = 97.8 bits (242), Expect = 2e-21
Identities = 51/64 (79%), Positives = 52/64 (81%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHP QLGLQDA SPIIEELL FHDH LIIIFLISSLVLY ISLIL T L H S AQE
Sbjct: 1 MAHPFQLGLQDATSPIIEELLHFHDHTLIIIFLISSLVLYIISLILTTKLMHTSTTDAQE 60
Query: 61 IETV 64
+ETV
Sbjct: 61 VETV 64
>gi|239744102 PREDICTED: hypothetical protein XP_002343062 [Homo
sapiens]
Length = 64
Score = 97.8 bits (242), Expect = 2e-21
Identities = 51/64 (79%), Positives = 52/64 (81%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAHP QLGLQDA SPIIEELL FHDH LIIIFLISSLVLY ISLIL T L H S AQE
Sbjct: 1 MAHPFQLGLQDATSPIIEELLHFHDHTLIIIFLISSLVLYIISLILTTKLMHTSTTDAQE 60
Query: 61 IETV 64
+ETV
Sbjct: 61 VETV 64
>gi|239753932 PREDICTED: similar to Cytochrome c oxidase subunit 2
[Homo sapiens]
Length = 64
Score = 90.5 bits (223), Expect = 3e-19
Identities = 48/64 (75%), Positives = 50/64 (78%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH VQLGLQD I+EELLTFHDH LIIIFLIS LVLY ISLI T LTH S I AQE
Sbjct: 1 MAHAVQLGLQDTTFLIMEELLTFHDHTLIIIFLISPLVLYIISLIFTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IQTV 64
>gi|239748474 PREDICTED: similar to Cytochrome c oxidase subunit 2
[Homo sapiens]
Length = 64
Score = 90.5 bits (223), Expect = 3e-19
Identities = 48/64 (75%), Positives = 50/64 (78%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH VQLGLQD I+EELLTFHDH LIIIFLIS LVLY ISLI T LTH S I AQE
Sbjct: 1 MAHAVQLGLQDTTFLIMEELLTFHDHTLIIIFLISPLVLYIISLIFTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IQTV 64
>gi|239742438 PREDICTED: hypothetical protein XP_002342515 [Homo
sapiens]
Length = 64
Score = 90.5 bits (223), Expect = 3e-19
Identities = 48/64 (75%), Positives = 50/64 (78%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH VQLGLQD I+EELLTFHDH LIIIFLIS LVLY ISLI T LTH S I AQE
Sbjct: 1 MAHAVQLGLQDTTFLIMEELLTFHDHTLIIIFLISPLVLYIISLIFTTKLTHTSTIDAQE 60
Query: 61 IETV 64
I+TV
Sbjct: 61 IQTV 64
>gi|239754134 PREDICTED: similar to Cytochrome c oxidase subunit 2
[Homo sapiens]
Length = 64
Score = 84.0 bits (206), Expect = 2e-17
Identities = 44/64 (68%), Positives = 48/64 (75%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH Q+GLQDA SPIIEEL+ FHDHALIIIFLI LVLY + L L T LT+ S QE
Sbjct: 1 MAHAAQVGLQDATSPIIEELIIFHDHALIIIFLICFLVLYALFLTLTTKLTNTSISDVQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|239742635 PREDICTED: hypothetical protein XP_002342601 [Homo
sapiens]
Length = 64
Score = 84.0 bits (206), Expect = 2e-17
Identities = 44/64 (68%), Positives = 48/64 (75%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH Q+GLQDA SPIIEEL+ FHDHALIIIFLI LVLY + L L T LT+ S QE
Sbjct: 1 MAHAAQVGLQDATSPIIEELIIFHDHALIIIFLICFLVLYALFLTLTTKLTNTSISDVQE 60
Query: 61 IETV 64
IETV
Sbjct: 61 IETV 64
>gi|251831110 cytochrome c oxidase subunit II [Homo sapiens]
Length = 227
Score = 83.2 bits (204), Expect = 4e-17
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH Q+GLQDA SPI+EEL+TFHDHAL+IIFLI LVLY + L L T LT+ + AQE
Sbjct: 1 MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQE 60
Query: 61 IETV 64
+ETV
Sbjct: 61 METV 64
>gi|196123582 cytochrome c oxidase subunit II [Homo sapiens
neanderthalensis]
Length = 227
Score = 82.0 bits (201), Expect = 9e-17
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 1 MAHPVQLGLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQE 60
MAH Q+GLQDA SPI+EEL+ FHDHAL+IIFLI LVLY + L L T LT+ S AQE
Sbjct: 1 MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTSISDAQE 60
Query: 61 IETV 64
+ETV
Sbjct: 61 METV 64
>gi|239752847 PREDICTED: hypothetical protein XP_002345402 [Homo
sapiens]
Length = 53
Score = 77.4 bits (189), Expect = 2e-15
Identities = 40/52 (76%), Positives = 42/52 (80%)
Query: 13 ISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ P +LLTFHDHALIIIFLISSLVLY ISLIL T LTH S HAQEIETV
Sbjct: 2 LHPYYRKLLTFHDHALIIIFLISSLVLYIISLILTTKLTHTSTKHAQEIETV 53
>gi|239747402 PREDICTED: hypothetical protein XP_002346644 [Homo
sapiens]
Length = 53
Score = 77.4 bits (189), Expect = 2e-15
Identities = 40/52 (76%), Positives = 42/52 (80%)
Query: 13 ISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ P +LLTFHDHALIIIFLISSLVLY ISLIL T LTH S HAQEIETV
Sbjct: 2 LHPYYRKLLTFHDHALIIIFLISSLVLYIISLILTTKLTHTSTKHAQEIETV 53
>gi|239741228 PREDICTED: hypothetical protein XP_002342139 [Homo
sapiens]
Length = 53
Score = 77.4 bits (189), Expect = 2e-15
Identities = 40/52 (76%), Positives = 42/52 (80%)
Query: 13 ISPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ P +LLTFHDHALIIIFLISSLVLY ISLIL T LTH S HAQEIETV
Sbjct: 2 LHPYYRKLLTFHDHALIIIFLISSLVLYIISLILTTKLTHTSTKHAQEIETV 53
>gi|239753950 PREDICTED: similar to cytochrome c oxidase subunit
II [Homo sapiens]
Length = 63
Score = 67.4 bits (163), Expect = 2e-12
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 14 SPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
SPIIEEL+ FHDHALIIIFLIS LVLY + L L T L + S AQE+ETV
Sbjct: 6 SPIIEELIAFHDHALIIIFLISFLVLYVLFLTLTTKLANTSITDAQEMETV 56
>gi|239748490 PREDICTED: hypothetical protein XP_002346674 [Homo
sapiens]
Length = 63
Score = 67.4 bits (163), Expect = 2e-12
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 14 SPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
SPIIEEL+ FHDHALIIIFLIS LVLY + L L T L + S AQE+ETV
Sbjct: 6 SPIIEELIAFHDHALIIIFLISFLVLYVLFLTLTTKLANTSITDAQEMETV 56
>gi|239742454 PREDICTED: hypothetical protein XP_002342519 [Homo
sapiens]
Length = 63
Score = 67.4 bits (163), Expect = 2e-12
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 14 SPIIEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
SPIIEEL+ FHDHALIIIFLIS LVLY + L L T L + S AQE+ETV
Sbjct: 6 SPIIEELIAFHDHALIIIFLISFLVLYVLFLTLTTKLANTSITDAQEMETV 56
>gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo
sapiens]
Length = 415
Score = 64.3 bits (155), Expect = 2e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 17 IEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ + +TFHDH L+I+FLISSLVLY ISLIL LT+ S I AQEIETV
Sbjct: 368 LRDEITFHDHTLVIVFLISSLVLYVISLILTIKLTNNSTIDAQEIETV 415
>gi|239747883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 63.9 bits (154), Expect = 3e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 17 IEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ + +TFHDH L+I+FLISSLVLY ISLIL LT+ S I AQEIETV
Sbjct: 198 LRDEITFHDHILVIVFLISSLVLYVISLILTIKLTNNSTIDAQEIETV 245
>gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo
sapiens]
Length = 433
Score = 63.9 bits (154), Expect = 3e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 17 IEELLTFHDHALIIIFLISSLVLYTISLILRTNLTHISAIHAQEIETV 64
+ + +TFHDH L+I+FLISSLVLY ISLIL LT+ S I AQEIETV
Sbjct: 386 LRDEITFHDHILVIVFLISSLVLYVISLILTIKLTNNSTIDAQEIETV 433
>gi|239757854 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 57.8 bits (138), Expect = 2e-09
Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 8 GLQDAISPIIEELLTFHDHALIIIFLISSLVLYTISL---ILRTNLTHISAIHAQEIET 63
G +S ELL FH H L+IIFLISSLV Y ISL IL T LTH S + QE+ET
Sbjct: 11 GKVQTVSSTWLELLHFHSHTLMIIFLISSLVFYIISLILTILTTKLTHTSTVDVQEVET 69
>gi|52317176 olfactory receptor, family 10, subfamily K, member 2
[Homo sapiens]
Length = 312
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 13 ISPIIEELLTFHDH-ALIIIFLISSLVLYTISLILRTNLTHI 53
I+P+++ L + H+H + I+IF++ +LVL L++ + HI
Sbjct: 181 IAPVLK-LASHHNHFSQIVIFMLCTLVLAIPLLLILVSYVHI 221
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.141 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,867,167
Number of Sequences: 37866
Number of extensions: 48171
Number of successful extensions: 159
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 129
Number of HSP's gapped (non-prelim): 30
length of query: 64
length of database: 18,247,518
effective HSP length: 37
effective length of query: 27
effective length of database: 16,846,476
effective search space: 454854852
effective search space used: 454854852
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.