Search of human proteins with 239753076

Search of human proteins with 239753076

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753076 PREDICTED: similar to acid phosphatase 1, soluble
[Homo sapiens]
         (134 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753076 PREDICTED: similar to acid phosphatase 1, soluble [...   280   2e-76
gi|239741502 PREDICTED: hypothetical protein XP_002342217 [Homo ...   280   2e-76
gi|239747634 PREDICTED: hypothetical protein XP_002347914 [Homo ...   226   6e-60
gi|4757714 acid phosphatase 1, soluble isoform c [Homo sapiens]       196   4e-51
gi|6005988 acid phosphatase 1, soluble isoform b [Homo sapiens]       177   3e-45
gi|96304457 acid phosphatase 1, soluble isoform d [Homo sapiens]       47   5e-06
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    29   1.3  
gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens]        27   3.8  
gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens]        27   3.8  
gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens]        27   3.8  
gi|58219792 RAP1B, member of RAS oncogene family [Homo sapiens]        27   6.4  
gi|7661678 RAP1B, member of RAS oncogene family [Homo sapiens]         27   6.4  
gi|58331202 RAP1A, member of RAS oncogene family [Homo sapiens]        26   8.4  
gi|4506413 RAP1A, member of RAS oncogene family [Homo sapiens]         26   8.4  
gi|18375528 UPF3 regulator of nonsense transcripts homolog B iso...    26   8.4  
gi|41281583 Histidine acid phosphatase domain containing 1 [Homo...    26   8.4  
gi|106879210 Src homology 2 domain containing adaptor protein B ...    26   8.4  
gi|12711674 UPF3 regulator of nonsense transcripts homolog B iso...    26   8.4  

>gi|239753076 PREDICTED: similar to acid phosphatase 1, soluble
           [Homo sapiens]
          Length = 134

 Score =  280 bits (717), Expect = 2e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA 60
           MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA
Sbjct: 1   MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA 60

Query: 61  KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ 120
           KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ
Sbjct: 61  KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ 120

Query: 121 LCVRCYRAFLEKAH 134
           LCVRCYRAFLEKAH
Sbjct: 121 LCVRCYRAFLEKAH 134


>gi|239741502 PREDICTED: hypothetical protein XP_002342217 [Homo
           sapiens]
          Length = 134

 Score =  280 bits (717), Expect = 2e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA 60
           MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA
Sbjct: 1   MGPKQLSADTMMDGAAEAHTSTLRKEKPGTPPDSRGQSFTERHGIPMSHVARQITKENFA 60

Query: 61  KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ 120
           KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ
Sbjct: 61  KFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQ 120

Query: 121 LCVRCYRAFLEKAH 134
           LCVRCYRAFLEKAH
Sbjct: 121 LCVRCYRAFLEKAH 134


>gi|239747634 PREDICTED: hypothetical protein XP_002347914 [Homo
           sapiens]
          Length = 215

 Score =  226 bits (575), Expect = 6e-60
 Identities = 106/108 (98%), Positives = 107/108 (99%)

Query: 27  KPGTPPDSRGQSFTERHGIPMSHVARQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTC 86
           + GTPPDSRGQSFTERHGIPMSHVARQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTC
Sbjct: 108 RKGTPPDSRGQSFTERHGIPMSHVARQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTC 167

Query: 87  KAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLCVRCYRAFLEKAH 134
           KAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLCVRCYRAFLEKAH
Sbjct: 168 KAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLCVRCYRAFLEKAH 215


>gi|4757714 acid phosphatase 1, soluble isoform c [Homo sapiens]
          Length = 158

 Score =  196 bits (499), Expect = 4e-51
 Identities = 94/106 (88%), Positives = 97/106 (91%)

Query: 29  GTPPDSRGQSFTERHGIPMSHVARQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTCKA 88
           G PPD RGQS  +RHGIPMSHVARQITKE+FA FDYI CMD+SNLRDLNRKSNQVKTCKA
Sbjct: 53  GNPPDYRGQSCMKRHGIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQVKTCKA 112

Query: 89  KIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLCVRCYRAFLEKAH 134
           KIELLGSYDPQKQLIIEDPYYGNDSDFE VYQ CVRC RAFLEKAH
Sbjct: 113 KIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEKAH 158


>gi|6005988 acid phosphatase 1, soluble isoform b [Homo sapiens]
          Length = 158

 Score =  177 bits (448), Expect = 3e-45
 Identities = 86/106 (81%), Positives = 89/106 (83%)

Query: 29  GTPPDSRGQSFTERHGIPMSHVARQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTCKA 88
           G  PD R  S    HGI  +H ARQITKE+FA FDYI CMD+SNLRDLNRKSNQVKTCKA
Sbjct: 53  GRSPDPRAVSCLRNHGIHTAHKARQITKEDFATFDYILCMDESNLRDLNRKSNQVKTCKA 112

Query: 89  KIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLCVRCYRAFLEKAH 134
           KIELLGSYDPQKQLIIEDPYYGNDSDFE VYQ CVRC RAFLEKAH
Sbjct: 113 KIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEKAH 158


>gi|96304457 acid phosphatase 1, soluble isoform d [Homo sapiens]
          Length = 112

 Score = 47.0 bits (110), Expect = 5e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query: 29 GTPPDSRGQSFTERHGIPMSHVARQI 54
          G PPD RGQS  +RHGIPMSHVARQ+
Sbjct: 53 GNPPDYRGQSCMKRHGIPMSHVARQV 78


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 68   MDDSNLRDLNRKSNQVKTCKAKIELLGS-YDPQKQL---IIEDPYYGND--SDFEMVYQL 121
            +D  NLRDL+  S +      +++LLG+ Y   KQ+    I++P   N   S  E +++ 
Sbjct: 964  IDLLNLRDLSNGSEEDNLPNTQLDLLGNDYLVSKQVKEYRIQEPNRENSFHSSIEAIWEE 1023

Query: 122  CVRCYRAFLEKAH 134
            C    +A  +K+H
Sbjct: 1024 CKEIVKASSKKSH 1036


>gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens]
          Length = 183

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V +  + +E+L +   ++   + D Y  N   F +VY L
Sbjct: 33  DPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSL 84


>gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens]
          Length = 183

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V +  + +E+L +   ++   + D Y  N   F +VY L
Sbjct: 33  DPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSL 84


>gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens]
          Length = 183

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V +  + +E+L +   ++   + D Y  N   F +VY L
Sbjct: 33  DPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSL 84


>gi|58219792 RAP1B, member of RAS oncogene family [Homo sapiens]
          Length = 184

 Score = 26.6 bits (57), Expect = 6.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V   +  +E+L +   ++   + D Y  N   F +VY +
Sbjct: 33  DPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSI 84


>gi|7661678 RAP1B, member of RAS oncogene family [Homo sapiens]
          Length = 184

 Score = 26.6 bits (57), Expect = 6.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V   +  +E+L +   ++   + D Y  N   F +VY +
Sbjct: 33  DPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSI 84


>gi|58331202 RAP1A, member of RAS oncogene family [Homo sapiens]
          Length = 184

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V   +  +E+L +   ++   + D Y  N   F +VY +
Sbjct: 33  DPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSI 84


>gi|4506413 RAP1A, member of RAS oncogene family [Homo sapiens]
          Length = 184

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 70  DSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEMVYQL 121
           D  + D  RK  +V   +  +E+L +   ++   + D Y  N   F +VY +
Sbjct: 33  DPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSI 84


>gi|18375528 UPF3 regulator of nonsense transcripts homolog B
           isoform 1 [Homo sapiens]
          Length = 483

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 4   KQLSADTMMDGAAEAHTSTLRK--------EKPGTPPDSRGQSFTER 42
           K+L  + + D  A   + TL K        EKP  P D  G+ + ER
Sbjct: 302 KKLDKENLSDERASGQSCTLPKRSDSELKDEKPKRPEDESGRDYRER 348


>gi|41281583 Histidine acid phosphatase domain containing 1 [Homo
           sapiens]
          Length = 1222

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 52  RQITKENFAKFDYIPCMDDSNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGN 111
           R  T E++ K    P    S ++ ++   N VKTC     L+ S   Q +  +EDP    
Sbjct: 631 RDFTAEDYEKLT--PSGSISLIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDP---K 685

Query: 112 DSDFEMVY 119
            SD ++ +
Sbjct: 686 SSDIQLYH 693


>gi|106879210 Src homology 2 domain containing adaptor protein B
           [Homo sapiens]
          Length = 509

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 91  ELLGSYDPQKQLIIEDPYYGNDSDFEMVYQLC 122
           +L+ +Y  QK+   EDPY G  S    +  +C
Sbjct: 79  DLIRAYRAQKERDFEDPYNGPGSSLRKLRAMC 110


>gi|12711674 UPF3 regulator of nonsense transcripts homolog B
           isoform 2 [Homo sapiens]
          Length = 470

 Score = 26.2 bits (56), Expect = 8.4
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 4   KQLSADTMMDGAAEAHTSTLRK--------EKPGTPPDSRGQSFTER 42
           K+L  + + D  A   + TL K        EKP  P D  G+ + ER
Sbjct: 289 KKLDKENLSDERASGQSCTLPKRSDSELKDEKPKRPEDESGRDYRER 335


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,513,451
Number of Sequences: 37866
Number of extensions: 220540
Number of successful extensions: 692
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 19
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.