Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 118421087
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118421087 monooxygenase, DBH-like 1 isoform 2 [Homo sapiens]
(613 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118421087 monooxygenase, DBH-like 1 isoform 2 [Homo sapiens] 1282 0.0
gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens] 294 1e-79
gi|21070984 peptidylglycine alpha-amidating monooxygenase isofor... 77 6e-14
gi|21070982 peptidylglycine alpha-amidating monooxygenase isofor... 77 6e-14
gi|21070980 peptidylglycine alpha-amidating monooxygenase isofor... 77 6e-14
gi|21070974 peptidylglycine alpha-amidating monooxygenase isofor... 77 6e-14
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 33 1.0
gi|59889558 neurotrophic tyrosine kinase, receptor, type 1 isofo... 32 2.2
gi|4585712 neurotrophic tyrosine kinase, receptor, type 1 isofor... 32 2.2
gi|56118210 neurotrophic tyrosine kinase, receptor, type 1 isofo... 32 2.2
gi|115648140 hypothetical protein LOC23732 [Homo sapiens] 31 2.9
gi|77812682 inorganic pyrophosphatase 2 isoform 4 precursor [Hom... 30 5.0
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 30 6.5
gi|66571327 ring finger protein 213 [Homo sapiens] 30 6.5
gi|109240552 RUN and FYVE domain-containing 2 isoform b [Homo sa... 30 6.5
gi|115527120 nebulin [Homo sapiens] 30 8.5
>gi|118421087 monooxygenase, DBH-like 1 isoform 2 [Homo sapiens]
Length = 613
Score = 1282 bits (3318), Expect = 0.0
Identities = 613/613 (100%), Positives = 613/613 (100%)
Query: 1 MCCWPLLLLWGLLPGTAAGGSGRTYPHRTLLDSEGKYWLGWSQRGSQIAFRLQVRTAGYV 60
MCCWPLLLLWGLLPGTAAGGSGRTYPHRTLLDSEGKYWLGWSQRGSQIAFRLQVRTAGYV
Sbjct: 1 MCCWPLLLLWGLLPGTAAGGSGRTYPHRTLLDSEGKYWLGWSQRGSQIAFRLQVRTAGYV 60
Query: 61 GFGFSPTGAMASADIVVGGVAHGRPYLQDYFTNANRELKKDAQQDYHLEYAMENSTHTII 120
GFGFSPTGAMASADIVVGGVAHGRPYLQDYFTNANRELKKDAQQDYHLEYAMENSTHTII
Sbjct: 61 GFGFSPTGAMASADIVVGGVAHGRPYLQDYFTNANRELKKDAQQDYHLEYAMENSTHTII 120
Query: 121 EFTRELHTCDINDKSITDSTVRVIWAYHHEDAGEAGPKYHDSNRGTKSLRLLNPEKTSVL 180
EFTRELHTCDINDKSITDSTVRVIWAYHHEDAGEAGPKYHDSNRGTKSLRLLNPEKTSVL
Sbjct: 121 EFTRELHTCDINDKSITDSTVRVIWAYHHEDAGEAGPKYHDSNRGTKSLRLLNPEKTSVL 180
Query: 181 STALPYFDLVNQDVPIPNKDTTYWCQMFKIPVFQEKHHVIKVEPVIQRGHESLVHHILLY 240
STALPYFDLVNQDVPIPNKDTTYWCQMFKIPVFQEKHHVIKVEPVIQRGHESLVHHILLY
Sbjct: 181 STALPYFDLVNQDVPIPNKDTTYWCQMFKIPVFQEKHHVIKVEPVIQRGHESLVHHILLY 240
Query: 241 QCSNNFNDSVLESGHECYHPNMPDAFLTCETVIFAWAIGGEGFSYPPHVGLSLGTPLDPH 300
QCSNNFNDSVLESGHECYHPNMPDAFLTCETVIFAWAIGGEGFSYPPHVGLSLGTPLDPH
Sbjct: 241 QCSNNFNDSVLESGHECYHPNMPDAFLTCETVIFAWAIGGEGFSYPPHVGLSLGTPLDPH 300
Query: 301 YVLLEVHYDNPTYEEGLIDNSGLRLFYTMDIRKYDAGVIEAGLWVSLFHTIPPGMPEFQS 360
YVLLEVHYDNPTYEEGLIDNSGLRLFYTMDIRKYDAGVIEAGLWVSLFHTIPPGMPEFQS
Sbjct: 301 YVLLEVHYDNPTYEEGLIDNSGLRLFYTMDIRKYDAGVIEAGLWVSLFHTIPPGMPEFQS 360
Query: 361 EGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRGIRLRHFRKGKEMKLLAYDDDFDFN 420
EGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRGIRLRHFRKGKEMKLLAYDDDFDFN
Sbjct: 361 EGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRGIRLRHFRKGKEMKLLAYDDDFDFN 420
Query: 421 FQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWGGLSTRSEMCLSYLLYYPRINLTRC 480
FQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWGGLSTRSEMCLSYLLYYPRINLTRC
Sbjct: 421 FQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWGGLSTRSEMCLSYLLYYPRINLTRC 480
Query: 481 ASIPDIMEQLQFIGVKEIYRPVTTWPFIIKSPKQYKNLSFMDAMNKFKWTKKEGLSFNKL 540
ASIPDIMEQLQFIGVKEIYRPVTTWPFIIKSPKQYKNLSFMDAMNKFKWTKKEGLSFNKL
Sbjct: 481 ASIPDIMEQLQFIGVKEIYRPVTTWPFIIKSPKQYKNLSFMDAMNKFKWTKKEGLSFNKL 540
Query: 541 VLSLPVNVRCSKTDNAEWSIQGMTALPPDIERPYKAEPLVCGTSSSSSLHRDFSINLLVC 600
VLSLPVNVRCSKTDNAEWSIQGMTALPPDIERPYKAEPLVCGTSSSSSLHRDFSINLLVC
Sbjct: 541 VLSLPVNVRCSKTDNAEWSIQGMTALPPDIERPYKAEPLVCGTSSSSSLHRDFSINLLVC 600
Query: 601 LLLLSCTLSTKSL 613
LLLLSCTLSTKSL
Sbjct: 601 LLLLSCTLSTKSL 613
>gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens]
Length = 617
Score = 294 bits (753), Expect = 1e-79
Identities = 193/595 (32%), Positives = 289/595 (48%), Gaps = 37/595 (6%)
Query: 6 LLLLWGLLPGTAAGGSGRTYPHRTLLDSEGKYWLGWSQRGSQIAFRLQV---RTAGYVGF 62
L++L L G+A S P+ LD EG L W+ +Q A Q+ R V F
Sbjct: 30 LVILVAALQGSAPRES--PLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLF 87
Query: 63 GFSPTGAMASADIVVGGVAHGRPYLQDYFTNANRELKKDAQQDYHLEYAMENSTHTIIEF 122
G S G + +AD+VV Y D +++ ++ D QQDY L + F
Sbjct: 88 GMSDRGELENADLVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLF 147
Query: 123 TRELHTCDINDKSITDSTVRVIWAYHHEDAGEAGPKYHDS-NRGTKSLRLLNPE-KTSVL 180
R TCD D I D TV +++ E G + ++LL P L
Sbjct: 148 KRPFGTCDPKDYLIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPEL 207
Query: 181 STALPYFDLVNQDVPIPNKDTTYWCQMFKIPVFQEKHHVIKVEPVIQRGHESLVHHILLY 240
+ ++ ++ IP+++TTYWC + ++P +HH+IK EP++ +G+E+LVHH+ ++
Sbjct: 208 PSDACTMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVF 267
Query: 241 QCSNNFNDSVLESGHECYHPNMPDAFLTCETVIFAWAIGGEGFSYPPHVGLSLGTPLDPH 300
QC+ DSV C PD C V+ AWA+G + F YP GL+ G P
Sbjct: 268 QCAPEM-DSVPHFSGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSR 326
Query: 301 YVLLEVHYDNPTYEEGLIDNSGLRLFYTMDIRKYDAGVIEAGLWVSLFHTIPPGMPEFQS 360
Y+ LEVHY NP EG D+SG+RL+YT +R+++AG++E GL + IPP F
Sbjct: 327 YLRLEVHYHNPLVIEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFIL 386
Query: 361 EGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRGIRLRHFRKGKEMKLLAYDDDFDFN 420
G+CT +C + AL PSGIH+FA LH HL GR + R G+E +++ D+ + +
Sbjct: 387 TGYCTDKCTQLAL---PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPH 443
Query: 421 FQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWGGLSTRSEMCLSYLLYYPRINLTRC 480
FQE + LK+ ++ PGD LIT C YNT+DR T GG EMC++Y+ YYP+ L C
Sbjct: 444 FQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELC 503
Query: 481 ASIPD--IMEQLQFIGVKEIYRPVTTWPFIIKSPKQYKNLSFMDAMNKFKWTKKEGLSFN 538
S D +++ + + V T P S W SFN
Sbjct: 504 KSAVDAGFLQKYFHLINRFNNEDVCTCP----------QASVSQQFTSVPWN-----SFN 548
Query: 539 KLVLS-----LPVNVRCSKTD----NAEWSIQGMTALPPDIERPYKAEPLVCGTS 584
+ VL P+++ C+K+ EW++Q + + +E P P G S
Sbjct: 549 RDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKVISTLEEPTPQCPTSQGRS 603
>gi|21070984 peptidylglycine alpha-amidating monooxygenase isoform a
preproprotein [Homo sapiens]
Length = 974
Score = 76.6 bits (187), Expect = 6e-14
Identities = 78/316 (24%), Positives = 121/316 (38%), Gaps = 52/316 (16%)
Query: 174 PEKTSVLSTALPYFDLVNQDVPI--------PNKDTTYWCQMFKIPVFQEKHHVIKVEPV 225
P L T P + + D + P + TY+C +IPV E+ VI +P
Sbjct: 37 PFSNECLGTTRPVVPIDSSDFALDIRMPGVTPKQSDTYFCMSMRIPV-DEEAFVIDFKP- 94
Query: 226 IQRGHESLVHHILLYQCSNNFNDSVLESGHECYHPNMPDAFLTCE--------TVIFAWA 277
R VHH+LL+ C+ P+ ++ C+ +++AWA
Sbjct: 95 --RASMDTVHHMLLFGCNM---------------PSSTGSYWFCDEGTCTDKANILYAWA 137
Query: 278 IGGEGFSYPPHVGLSLGTPLDPHYVLLEVHY-DNPTYEEGLIDNSGLRLFYTMDIRKYDA 336
P VG +G Y +L+VHY D + + D SG+ L T + A
Sbjct: 138 RNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIA 197
Query: 337 GVIEAGLWVSLFHTIPPGMPEFQSEGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRG 396
G+ L +S+ IP G S+ C K +HVFA +H H G+
Sbjct: 198 GMY---LMMSVDTVIPAGEKVVNSDISCHY----------KNYPMHVFAYRVHTHHLGKV 244
Query: 397 IRLRHFRKGKEMKLLAYDDDFDFNFQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWG 456
+ R G+ + Q F + + GD L C + + R E T
Sbjct: 245 VSGYRVRNGQWTLIGRQSPQLP---QAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHI 301
Query: 457 GLSTRSEMCLSYLLYY 472
G ++ EMC Y++YY
Sbjct: 302 GGTSSDEMCNLYIMYY 317
>gi|21070982 peptidylglycine alpha-amidating monooxygenase isoform d
preproprotein [Homo sapiens]
Length = 887
Score = 76.6 bits (187), Expect = 6e-14
Identities = 78/316 (24%), Positives = 121/316 (38%), Gaps = 52/316 (16%)
Query: 174 PEKTSVLSTALPYFDLVNQDVPI--------PNKDTTYWCQMFKIPVFQEKHHVIKVEPV 225
P L T P + + D + P + TY+C +IPV E+ VI +P
Sbjct: 37 PFSNECLGTTRPVVPIDSSDFALDIRMPGVTPKQSDTYFCMSMRIPV-DEEAFVIDFKP- 94
Query: 226 IQRGHESLVHHILLYQCSNNFNDSVLESGHECYHPNMPDAFLTCE--------TVIFAWA 277
R VHH+LL+ C+ P+ ++ C+ +++AWA
Sbjct: 95 --RASMDTVHHMLLFGCNM---------------PSSTGSYWFCDEGTCTDKANILYAWA 137
Query: 278 IGGEGFSYPPHVGLSLGTPLDPHYVLLEVHY-DNPTYEEGLIDNSGLRLFYTMDIRKYDA 336
P VG +G Y +L+VHY D + + D SG+ L T + A
Sbjct: 138 RNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIA 197
Query: 337 GVIEAGLWVSLFHTIPPGMPEFQSEGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRG 396
G+ L +S+ IP G S+ C K +HVFA +H H G+
Sbjct: 198 GMY---LMMSVDTVIPAGEKVVNSDISCHY----------KNYPMHVFAYRVHTHHLGKV 244
Query: 397 IRLRHFRKGKEMKLLAYDDDFDFNFQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWG 456
+ R G+ + Q F + + GD L C + + R E T
Sbjct: 245 VSGYRVRNGQWTLIGRQSPQLP---QAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHI 301
Query: 457 GLSTRSEMCLSYLLYY 472
G ++ EMC Y++YY
Sbjct: 302 GGTSSDEMCNLYIMYY 317
>gi|21070980 peptidylglycine alpha-amidating monooxygenase isoform c
preproprotein [Homo sapiens]
Length = 866
Score = 76.6 bits (187), Expect = 6e-14
Identities = 78/316 (24%), Positives = 121/316 (38%), Gaps = 52/316 (16%)
Query: 174 PEKTSVLSTALPYFDLVNQDVPI--------PNKDTTYWCQMFKIPVFQEKHHVIKVEPV 225
P L T P + + D + P + TY+C +IPV E+ VI +P
Sbjct: 37 PFSNECLGTTRPVVPIDSSDFALDIRMPGVTPKQSDTYFCMSMRIPV-DEEAFVIDFKP- 94
Query: 226 IQRGHESLVHHILLYQCSNNFNDSVLESGHECYHPNMPDAFLTCE--------TVIFAWA 277
R VHH+LL+ C+ P+ ++ C+ +++AWA
Sbjct: 95 --RASMDTVHHMLLFGCNM---------------PSSTGSYWFCDEGTCTDKANILYAWA 137
Query: 278 IGGEGFSYPPHVGLSLGTPLDPHYVLLEVHY-DNPTYEEGLIDNSGLRLFYTMDIRKYDA 336
P VG +G Y +L+VHY D + + D SG+ L T + A
Sbjct: 138 RNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIA 197
Query: 337 GVIEAGLWVSLFHTIPPGMPEFQSEGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRG 396
G+ L +S+ IP G S+ C K +HVFA +H H G+
Sbjct: 198 GMY---LMMSVDTVIPAGEKVVNSDISCHY----------KNYPMHVFAYRVHTHHLGKV 244
Query: 397 IRLRHFRKGKEMKLLAYDDDFDFNFQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWG 456
+ R G+ + Q F + + GD L C + + R E T
Sbjct: 245 VSGYRVRNGQWTLIGRQSPQLP---QAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHI 301
Query: 457 GLSTRSEMCLSYLLYY 472
G ++ EMC Y++YY
Sbjct: 302 GGTSSDEMCNLYIMYY 317
>gi|21070974 peptidylglycine alpha-amidating monooxygenase isoform b
preproprotein [Homo sapiens]
Length = 905
Score = 76.6 bits (187), Expect = 6e-14
Identities = 78/316 (24%), Positives = 121/316 (38%), Gaps = 52/316 (16%)
Query: 174 PEKTSVLSTALPYFDLVNQDVPI--------PNKDTTYWCQMFKIPVFQEKHHVIKVEPV 225
P L T P + + D + P + TY+C +IPV E+ VI +P
Sbjct: 37 PFSNECLGTTRPVVPIDSSDFALDIRMPGVTPKQSDTYFCMSMRIPV-DEEAFVIDFKP- 94
Query: 226 IQRGHESLVHHILLYQCSNNFNDSVLESGHECYHPNMPDAFLTCE--------TVIFAWA 277
R VHH+LL+ C+ P+ ++ C+ +++AWA
Sbjct: 95 --RASMDTVHHMLLFGCNM---------------PSSTGSYWFCDEGTCTDKANILYAWA 137
Query: 278 IGGEGFSYPPHVGLSLGTPLDPHYVLLEVHY-DNPTYEEGLIDNSGLRLFYTMDIRKYDA 336
P VG +G Y +L+VHY D + + D SG+ L T + A
Sbjct: 138 RNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIA 197
Query: 337 GVIEAGLWVSLFHTIPPGMPEFQSEGHCTLECLEEALEAEKPSGIHVFAVLLHAHLAGRG 396
G+ L +S+ IP G S+ C K +HVFA +H H G+
Sbjct: 198 GMY---LMMSVDTVIPAGEKVVNSDISCHY----------KNYPMHVFAYRVHTHHLGKV 244
Query: 397 IRLRHFRKGKEMKLLAYDDDFDFNFQEFQYLKEEQTILPGDNLITECRYNTKDRAEMTWG 456
+ R G+ + Q F + + GD L C + + R E T
Sbjct: 245 VSGYRVRNGQWTLIGRQSPQLP---QAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHI 301
Query: 457 GLSTRSEMCLSYLLYY 472
G ++ EMC Y++YY
Sbjct: 302 GGTSSDEMCNLYIMYY 317
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 32.7 bits (73), Expect = 1.0
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 12/50 (24%)
Query: 5 PLLLLWGLLP------------GTAAGGSGRTYPHRTLLDSEGKYWLGWS 42
P +LW LLP G GG G+ PH L EG W W+
Sbjct: 939 PRAVLWWLLPVLPQLEERLWGQGRPLGGVGQYLPHSQLASGEGPRWASWA 988
>gi|59889558 neurotrophic tyrosine kinase, receptor, type 1 isoform
1 [Homo sapiens]
Length = 790
Score = 31.6 bits (70), Expect = 2.2
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 517 NLSFMDAMNKFKWTKKEGLSFNKLVLS-LPVNVRCSKTDNAEWSIQGMTALP 567
NLSF +A+ W +GLS +LVLS P++ C+ W +G+ +P
Sbjct: 121 NLSF-NALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVP 171
>gi|4585712 neurotrophic tyrosine kinase, receptor, type 1 isoform 2
[Homo sapiens]
Length = 796
Score = 31.6 bits (70), Expect = 2.2
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 517 NLSFMDAMNKFKWTKKEGLSFNKLVLS-LPVNVRCSKTDNAEWSIQGMTALP 567
NLSF +A+ W +GLS +LVLS P++ C+ W +G+ +P
Sbjct: 121 NLSF-NALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVP 171
>gi|56118210 neurotrophic tyrosine kinase, receptor, type 1 isoform
3 [Homo sapiens]
Length = 760
Score = 31.6 bits (70), Expect = 2.2
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 517 NLSFMDAMNKFKWTKKEGLSFNKLVLS-LPVNVRCSKTDNAEWSIQGMTALP 567
NLSF +A+ W +GLS +LVLS P++ C+ W +G+ +P
Sbjct: 91 NLSF-NALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVP 141
>gi|115648140 hypothetical protein LOC23732 [Homo sapiens]
Length = 344
Score = 31.2 bits (69), Expect = 2.9
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 37 YWLGWSQRGSQIAFRLQVRTAGYVGFGFSPTGAMASADIVVGGVAH---GRPYLQDYFTN 93
Y+L + G+ + F L T G+V GFS M D++ H GR +Q ++
Sbjct: 172 YFLSYRMIGADVEFELSADTDGWVAVGFSSDKKMGGDDVM--ACVHDDNGRVRIQHFYNV 229
Query: 94 AN--RELKKDAQQDYHLEYAMENSTHTIIEFTRELHTCDINDKSITDSTVRVIWAY 147
+E++++ +D E EN+ T F R ++ D++I D + + W Y
Sbjct: 230 GQWAKEIQRNPARDE--EGVFENNRVT-CRFKRPVNV--PRDETIVD--LHLSWYY 278
>gi|77812682 inorganic pyrophosphatase 2 isoform 4 precursor [Homo
sapiens]
Length = 168
Score = 30.4 bits (67), Expect = 5.0
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 312 TYEEGLIDNSGLRLFYTMD-IRKYDAGVIEAGL-WVSLFHTIPPGMPEFQ 359
T E G + RLF+ +D ++K+ G +EA L W L+ +P G PE Q
Sbjct: 37 TEERGQPCSQNYRLFFNIDDVKKFKPGYLEATLNWFRLY-KVPDGKPENQ 85
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 30.0 bits (66), Expect = 6.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 82 HGRPYLQDYFTNANRELKKDAQ--QDYHLEYAMENSTHTIIEFTRELHTCDINDKSIT 137
H R L + + A R+L+ ++Q QD E A++ S IE +L DI++K T
Sbjct: 324 HSRQGLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDT 381
>gi|66571327 ring finger protein 213 [Homo sapiens]
Length = 3280
Score = 30.0 bits (66), Expect = 6.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 167 KSLRLLNPE--KTSVLSTALPYFDLVNQDVPI-------PNKDTTYWCQMFKIPVFQ 214
K++RL++P+ ++ VL LP+ D Q VP+ + T W +FK+ + Q
Sbjct: 94 KTIRLIDPQVDESRVLGALLPFLDAQYQKVPVLFHLDVTSSVQTGIWVFLFKLLILQ 150
>gi|109240552 RUN and FYVE domain-containing 2 isoform b [Homo
sapiens]
Length = 403
Score = 30.0 bits (66), Expect = 6.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 82 HGRPYLQDYFTNANRELKKDAQ--QDYHLEYAMENSTHTIIEFTRELHTCDINDKSIT 137
H R L + + A R+L+ ++Q QD E A++ S IE +L DI++K T
Sbjct: 255 HSRQGLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDT 312
>gi|115527120 nebulin [Homo sapiens]
Length = 6669
Score = 29.6 bits (65), Expect = 8.5
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 23/180 (12%)
Query: 370 EEALEAEKPSGIHVFAVLLHAHLAGRGIRLRHFRKGKEMKLLAYDDDFDFNFQEFQYLKE 429
EE+++ +G+ V LLH A + + +RK E + E + +
Sbjct: 5942 EESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGK------GLTEMEDTPD 5995
Query: 430 EQTILPGDNLITECRYNTKDRAEMTWGGLSTRSEMCLSYLLYYPRINLTRCASIPDIMEQ 489
++ E Y E+ GL+ + ++ R + DI Q
Sbjct: 5996 MLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFM---------RARNATDIASQ 6046
Query: 490 LQFIGVKEI----YRPVTTWPFIIKSPKQYKNLSFMDAMNKFKWTKKEGLSFNKLVLSLP 545
+++ E+ + V P II + +Q KNLS + K+K ++ +S+ + VL P
Sbjct: 6047 IKYKQSAEMEKANFTSVVDTPEIIHA-QQVKNLS---SQKKYKEDAEKSMSYYETVLDTP 6102
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,348,678
Number of Sequences: 37866
Number of extensions: 1181386
Number of successful extensions: 2436
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2405
Number of HSP's gapped (non-prelim): 20
length of query: 613
length of database: 18,247,518
effective HSP length: 108
effective length of query: 505
effective length of database: 14,157,990
effective search space: 7149784950
effective search space used: 7149784950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.