Search of human proteins with 239751572

Search of human proteins with 239751572

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751572 PREDICTED: similar to hCG1979072 [Homo sapiens]
         (121 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757062 PREDICTED: similar to hCG1979072 [Homo sapiens]          239   5e-64
gi|239751572 PREDICTED: similar to hCG1979072 [Homo sapiens]          239   5e-64
gi|239746084 PREDICTED: similar to hCG1979072 [Homo sapiens]          239   5e-64
gi|48255933 high-mobility group nucleosome binding domain 1 [Hom...   173   2e-44
gi|239757066 PREDICTED: hypothetical protein [Homo sapiens]           116   5e-27
gi|239751576 PREDICTED: hypothetical protein [Homo sapiens]           115   6e-27
gi|239746088 PREDICTED: hypothetical protein [Homo sapiens]           115   6e-27
gi|20270186 high mobility group nucleosomal binding domain 3 iso...    68   1e-12
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom...    62   1e-10
gi|169165669 PREDICTED: similar to high-mobility group nucleosom...    58   2e-09
gi|113415254 PREDICTED: similar to high-mobility group nucleosom...    58   2e-09
gi|113414676 PREDICTED: similar to high-mobility group nucleosom...    58   2e-09
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]            57   3e-09
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]            57   3e-09
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]             57   3e-09
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]            57   3e-09
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]             57   3e-09
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]            57   3e-09
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]           56   6e-09
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]           56   6e-09
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]           56   6e-09
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               55   1e-08
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]           54   2e-08
gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]           54   2e-08
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ...    54   2e-08
gi|169209024 PREDICTED: similar to high-mobility group nucleosom...    53   5e-08
gi|113425750 PREDICTED: similar to high-mobility group nucleosom...    53   5e-08
gi|113425298 PREDICTED: similar to high-mobility group nucleosom...    53   5e-08
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]           53   6e-08
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ...    53   6e-08

>gi|239757062 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  239 bits (609), Expect = 5e-64
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60
           MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA
Sbjct: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60

Query: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120
           AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS
Sbjct: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120

Query: 121 D 121
           D
Sbjct: 121 D 121


>gi|239751572 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  239 bits (609), Expect = 5e-64
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60
           MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA
Sbjct: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60

Query: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120
           AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS
Sbjct: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120

Query: 121 D 121
           D
Sbjct: 121 D 121


>gi|239746084 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  239 bits (609), Expect = 5e-64
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60
           MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA
Sbjct: 1   MATFEMMMSKACMSGNQLKPRSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEAKPKKA 60

Query: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120
           AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS
Sbjct: 61  AAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 120

Query: 121 D 121
           D
Sbjct: 121 D 121


>gi|48255933 high-mobility group nucleosome binding domain 1 [Homo
           sapiens]
          Length = 100

 Score =  173 bits (439), Expect = 2e-44
 Identities = 88/90 (97%), Positives = 88/90 (97%)

Query: 32  GGAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQET 91
           G AKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQ EVANQET
Sbjct: 11  GAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAEVANQET 70

Query: 92  KEDLPAENGETKTEESPASDEAGEKEAKSD 121
           KEDLPAENGETKTEESPASDEAGEKEAKSD
Sbjct: 71  KEDLPAENGETKTEESPASDEAGEKEAKSD 100


>gi|239757066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  116 bits (290), Expect = 5e-27
 Identities = 63/88 (71%), Positives = 71/88 (80%), Gaps = 2/88 (2%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GAKGKQTEVANQETK 92
           KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GAKG+Q ++ANQETK
Sbjct: 28  KEEPKRTSARLSVKPAAAKVEMKPKMKTGENKSSDKKVQTKGKKNGAKGEQGDMANQETK 87

Query: 93  EDLPAENGETKTEESPASDEAGEKEAKS 120
           ED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 88  EDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|239751576 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  115 bits (289), Expect = 6e-27
 Identities = 63/88 (71%), Positives = 71/88 (80%), Gaps = 2/88 (2%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GAKGKQTEVANQETK 92
           KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GAKG+Q ++ANQETK
Sbjct: 28  KEEPKRTSARLSVKPAAAKVEMKPKMKTRENKSSDKKVQTKGKKNGAKGEQGDMANQETK 87

Query: 93  EDLPAENGETKTEESPASDEAGEKEAKS 120
           ED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 88  EDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|239746088 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  115 bits (289), Expect = 6e-27
 Identities = 63/88 (71%), Positives = 71/88 (80%), Gaps = 2/88 (2%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GAKGKQTEVANQETK 92
           KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GAKG+Q ++ANQETK
Sbjct: 28  KEEPKRTSARLSVKPAAAKVEMKPKMKTRENKSSDKKVQTKGKKNGAKGEQGDMANQETK 87

Query: 93  EDLPAENGETKTEESPASDEAGEKEAKS 120
           ED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 88  EDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|20270186 high mobility group nucleosomal binding domain 3
           isoform HMGN3a [Homo sapiens]
          Length = 99

 Score = 68.2 bits (165), Expect = 1e-12
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 9/96 (9%)

Query: 20  PRSASLEDLCGVGGAK---EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKG 75
           P+  S E+  G  G+K   +EP RRSARLSAKP P K E KP+K +AK     K+   K 
Sbjct: 2   PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAK-----KEPGAKI 56

Query: 76  KRGAKGKQTEVANQETKEDLPAENGETKTEESPASD 111
            RGAKGK+ E      +   P+ENGETK EE+  ++
Sbjct: 57  SRGAKGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92


>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
           sapiens]
          Length = 90

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRSARLSAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 18  KDEPQRRSARLSAKPAPPKPEPKPKKAPAK----------KGEKVPKGKKGK-ADAGKEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT+++  ++ AG+
Sbjct: 67  NNPAENGDAKTDQAQKAEGAGD 88


>gi|169165669 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS RLSAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 18  KDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGEKVPKGKKGK-ADAGEEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG  KT+++  ++  G+
Sbjct: 67  NNPAENGVAKTDQAQKAESPGD 88


>gi|113415254 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS RLSAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 18  KDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGEKVPKGKKGK-ADAGEEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG  KT+++  ++  G+
Sbjct: 67  NNPAENGVAKTDQAQKAESPGD 88


>gi|113414676 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS RLSAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 18  KDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGEKVPKGKKGK-ADAGEEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG  KT+++  ++  G+
Sbjct: 67  NNPAENGVAKTDQAQKAESPGD 88


>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 13/98 (13%)

Query: 20  PRSASLEDLCGVGG-AKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 77
           PR  +  D  GV    K++P+RRS RL+AKP P K  +KPKK  AK+    +KV  KGK+
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN---GEKV-LKGKK 70

Query: 78  GAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGE 115
           G      E  N       PAENGETKT+ +  ++ AG+
Sbjct: 71  GKADAGKEGNN-------PAENGETKTDHAQKAEGAGD 101


>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 12/81 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS R SAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 68  KDEPQRRSMRFSAKPAPPKPEPKPKKAPAK----------KGEKIPKGKKGK-ADAGEEG 116

Query: 94  DLPAENGETKTEESPASDEAG 114
           + PAENG+ KT+++  ++ AG
Sbjct: 117 NNPAENGDAKTDQAQKAEGAG 137


>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 13/98 (13%)

Query: 20  PRSASLEDLCGVGG-AKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 77
           PR  +  D  GV    K++P+RRS RL+AKP P K  +KPKK  AK+    +KV  KGK+
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN---GEKV-LKGKK 70

Query: 78  GAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGE 115
           G      E  N       PAENGETKT+ +  ++ AG+
Sbjct: 71  GKADAGKEGNN-------PAENGETKTDHAQKAEGAGD 101


>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 12/81 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS R SAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 68  KDEPQRRSMRFSAKPAPPKPEPKPKKAPAK----------KGEKIPKGKKGK-ADAGEEG 116

Query: 94  DLPAENGETKTEESPASDEAG 114
           + PAENG+ KT+++  ++ AG
Sbjct: 117 NNPAENGDAKTDQAQKAEGAG 137


>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 13/98 (13%)

Query: 20  PRSASLEDLCGVGG-AKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 77
           PR  +  D  GV    K++P+RRS RL+AKP P K  +KPKK  AK+    +KV  KGK+
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN---GEKV-LKGKK 70

Query: 78  GAKGKQTEVANQETKEDLPAENGETKTEESPASDEAGE 115
           G      E  N       PAENGETKT+ +  ++ AG+
Sbjct: 71  GKADAGKEGNN-------PAENGETKTDHAQKAEGAGD 101


>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 12/81 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRS R SAKP P K E KPKKA AK          KG++  KGK+ + A+   + 
Sbjct: 68  KDEPQRRSMRFSAKPAPPKPEPKPKKAPAK----------KGEKIPKGKKGK-ADAGEEG 116

Query: 94  DLPAENGETKTEESPASDEAG 114
           + PAENG+ KT+++  ++ AG
Sbjct: 117 NNPAENGDAKTDQAQKAEGAG 137


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score = 56.2 bits (134), Expect = 6e-09
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRSARLSAKP + K E KPKKA AK          KG++  K K+ + A+   + 
Sbjct: 53  KDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGEKVLKEKKGK-ADAGKEG 101

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT++   ++ AG+
Sbjct: 102 NNPAENGDAKTDQEQKAEGAGD 123


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 56.2 bits (134), Expect = 6e-09
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRSARLSAKP + K E KPKKA AK          KG++  K K+ + A+   + 
Sbjct: 36  KDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGEKVLKEKKGK-ADAGKEG 84

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT++   ++ AG+
Sbjct: 85  NNPAENGDAKTDQEQKAEGAGD 106


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 56.2 bits (134), Expect = 6e-09
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K+EP+RRSARLSAKP + K E KPKKA AK          KG++  K K+ + A+   + 
Sbjct: 36  KDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGEKVLKEKKGK-ADAGKEG 84

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT++   ++ AG+
Sbjct: 85  NNPAENGDAKTDQEQKAEGAGD 106


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)

Query: 30  GVGGAKEEPKRRSARLSAK-PPAKVEAKPKKAAAKDKSSDK------KVQTKGKRGAKGK 82
           G G  ++EPKRRSARLSA   P   E KPK+ ++  K   K       + T  +  A+ K
Sbjct: 8   GQGDMRQEPKRRSARLSAMLVPVTPEVKPKRTSSSRKMKTKSDMMEENIDTSAQAVAETK 67

Query: 83  QTEVANQETKEDLPAENGETKTEESPASDE 112
           Q  V  ++  E+  A+NGE K  E+PAS++
Sbjct: 68  QEAVVEEDYNEN--AKNGEAKITEAPASEK 95



 Score = 36.2 bits (82), Expect = 0.006
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 36  EEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKEDL 95
           E  K   A+++  P ++ E    K    + +++K  + K    A+ K  E   +E +ED 
Sbjct: 78  ENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQ 137

Query: 96  PAENGETKTEESPASDEAGEKEAKSD 121
             E GE   E+    DE GE++ K D
Sbjct: 138 NEEKGEAGKED---KDEKGEEDGKED 160



 Score = 31.6 bits (70), Expect = 0.15
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 32  GGAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQE- 90
           G  K E ++           K     K+   K +  D KV+   K    GK+ E  N+E 
Sbjct: 189 GKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEE 248

Query: 91  ---TKEDLPAENGETKTEESPASDEAGEKE 117
               KEDL  E  E   EE    ++ G+KE
Sbjct: 249 AGKEKEDLKEE--EEGKEEDEIKEDDGKKE 276



 Score = 27.7 bits (60), Expect = 2.2
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 21  RSASLEDLCGVGGAKEEPKRRSARLSAKPPAKVEA--KPKKAAAKDKSSDKKVQTKGKRG 78
           +  ++ED    GG K+E      +   +   + E     +K  A  +  D+K +  GK  
Sbjct: 101 KEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKED 160

Query: 79  AKGKQTEVANQETKEDLPAENGETKTEE--SPASDEAGEKEAK 119
             G +     +E ++    E+G+   E+      DE  E++ K
Sbjct: 161 KNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRK 203


>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 130

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K++P+RRS RLSAKP P K E KPK A AK     +KV  KGK+GA+      A+   + 
Sbjct: 56  KDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---KGEKV-PKGKKGARR-----ADAGKEG 106

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ K +E+  ++  G+
Sbjct: 107 NNPAENGDAKRDEAQKAEGTGD 128


>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 171

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K++P+RRS RLSAKP P K E KPK A AK     +KV  KGK+GA+      A+   + 
Sbjct: 97  KDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---KGEKV-PKGKKGARR-----ADAGKEG 147

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ K +E+  ++  G+
Sbjct: 148 NNPAENGDAKRDEAQKAEGTGD 169


>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
           sapiens]
          Length = 171

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           K++P+RRS RLSAKP P K E KPK A AK     +KV  KGK+GA+      A+   + 
Sbjct: 97  KDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---KGEKV-PKGKKGARR-----ADAGKEG 147

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ K +E+  ++  G+
Sbjct: 148 NNPAENGDAKRDEAQKAEGTGD 169


>gi|169209024 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 53.1 bits (126), Expect = 5e-08
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           +++P+RRSARLS KP P K E KPKK  AK+          G++  KG+  + A+   + 
Sbjct: 18  RDKPQRRSARLSTKPAPPKPETKPKKVPAKN----------GEKVLKGEMGK-ADTGKEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT+++   + AG+
Sbjct: 67  NKPAENGDAKTDQTQKGEGAGD 88


>gi|113425750 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 53.1 bits (126), Expect = 5e-08
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           +++P+RRSARLS KP P K E KPKK  AK+          G++  KG+  + A+   + 
Sbjct: 18  RDKPQRRSARLSTKPAPPKPETKPKKVPAKN----------GEKVLKGEMGK-ADTGKEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT+++   + AG+
Sbjct: 67  NKPAENGDAKTDQTQKGEGAGD 88


>gi|113425298 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score = 53.1 bits (126), Expect = 5e-08
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 12/82 (14%)

Query: 35  KEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQETKE 93
           +++P+RRSARLS KP P K E KPKK  AK+          G++  KG+  + A+   + 
Sbjct: 18  RDKPQRRSARLSTKPAPPKPETKPKKVPAKN----------GEKVLKGEMGK-ADTGKEG 66

Query: 94  DLPAENGETKTEESPASDEAGE 115
           + PAENG+ KT+++   + AG+
Sbjct: 67  NKPAENGDAKTDQTQKGEGAGD 88


>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 197

 Score = 52.8 bits (125), Expect = 6e-08
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 20  PRSASLEDLCGVGGAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRG 78
           P+  +  D+ G     + P+RRS RLSAKP P K E KPKKA AK          KG++ 
Sbjct: 110 PKRKTEGDVKGDKAKVDTPQRRSTRLSAKPAPPKPEPKPKKAPAK----------KGEKV 159

Query: 79  AKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAK 119
            KGK+ + A+   + + PAE G+  T++  A +  G+ EAK
Sbjct: 160 PKGKKGK-ADAGKEGNYPAEKGDAITDQ--AREAEGDGEAK 197


>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
           sapiens]
          Length = 197

 Score = 52.8 bits (125), Expect = 6e-08
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 20  PRSASLEDLCGVGGAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKRG 78
           P+  +  D+ G     + P+RRS RLSAKP P K E KPKKA AK          KG++ 
Sbjct: 110 PKRKTEGDVKGDKAKVDTPQRRSTRLSAKPAPPKPEPKPKKAPAK----------KGEKV 159

Query: 79  AKGKQTEVANQETKEDLPAENGETKTEESPASDEAGEKEAK 119
            KGK+ + A+   + + PAE G+  T++  A +  G+ EAK
Sbjct: 160 PKGKKGK-ADAGKEGNYPAEKGDAITDQ--AREAEGDGEAK 197


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.298    0.116    0.303 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,657,899
Number of Sequences: 37866
Number of extensions: 191315
Number of successful extensions: 2110
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 1262
Number of HSP's gapped (non-prelim): 943
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.