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Search of human proteins with 239750115
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens] 313 4e-86
gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens] 244 2e-65
gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens] 244 2e-65
gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens] 244 2e-65
gi|239755573 PREDICTED: similar to ectonucleotide pyrophosphatas... 235 9e-63
gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo ... 207 2e-54
gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens] 205 1e-53
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 169 8e-43
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 169 8e-43
gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7 [... 99 1e-21
gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5 (... 44 5e-05
gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4 (p... 33 0.089
gi|108773804 Fraser syndrome 1 [Homo sapiens] 30 0.75
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens] 27 4.9
gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens] 27 4.9
gi|4505331 N-ethylmaleimide-sensitive factor attachment protein,... 27 6.4
>gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 149
Score = 313 bits (801), Expect = 4e-86
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MSLDWGTDVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLV 60
MSLDWGTDVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLV
Sbjct: 1 MSLDWGTDVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLV 60
Query: 61 ESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQL 120
ESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQL
Sbjct: 61 ESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQL 120
Query: 121 DRTIGYLVGATEKHSLQSTSASSSHETMG 149
DRTIGYLVGATEKHSLQSTSASSSHETMG
Sbjct: 121 DRTIGYLVGATEKHSLQSTSASSSHETMG 149
>gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 244 bits (623), Expect = 2e-65
Identities = 118/129 (91%), Positives = 121/129 (93%)
Query: 21 MRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTV 80
MRNGP+GIFFLYLQ NKAASSHYSRGGAKY+GEAVKR LVESYTHPNSNETE RENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 81 MNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTS 140
MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+DRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 141 ASSSHETMG 149
SSSHE MG
Sbjct: 121 VSSSHEAMG 129
>gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 244 bits (623), Expect = 2e-65
Identities = 118/129 (91%), Positives = 121/129 (93%)
Query: 21 MRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTV 80
MRNGP+GIFFLYLQ NKAASSHYSRGGAKY+GEAVKR LVESYTHPNSNETE RENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 81 MNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTS 140
MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+DRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 141 ASSSHETMG 149
SSSHE MG
Sbjct: 121 VSSSHEAMG 129
>gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 244 bits (623), Expect = 2e-65
Identities = 118/129 (91%), Positives = 121/129 (93%)
Query: 21 MRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTV 80
MRNGP+GIFFLYLQ NKAASSHYSRGGAKY+GEAVKR LVESYTHPNSNETE RENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 81 MNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTS 140
MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+DRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 141 ASSSHETMG 149
SSSHE MG
Sbjct: 121 VSSSHEAMG 129
>gi|239755573 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 (putative function)
[Homo sapiens]
Length = 661
Score = 235 bits (600), Expect = 9e-63
Identities = 115/131 (87%), Positives = 121/131 (92%)
Query: 8 DVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPN 67
DVDNSSFADCEKGMRNGP+GIF LY++ KAASSHYSRGGAKYEGEAVKR LVESYTH N
Sbjct: 198 DVDNSSFADCEKGMRNGPDGIFLLYVKGKKAASSHYSRGGAKYEGEAVKRSLVESYTHQN 257
Query: 68 SNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYL 127
SNETE+RENIDTVMN FTKEDFD VTL YR+PDNV HRF+PEAENRKLMIQQLDRTI YL
Sbjct: 258 SNETEQRENIDTVMNCFTKEDFDFVTLYYRQPDNVGHRFKPEAENRKLMIQQLDRTIWYL 317
Query: 128 VGATEKHSLQS 138
VGATEKHSLQS
Sbjct: 318 VGATEKHSLQS 328
>gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo
sapiens]
Length = 169
Score = 207 bits (528), Expect = 2e-54
Identities = 100/114 (87%), Positives = 106/114 (92%)
Query: 36 NKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLC 95
N+AAS HYSRGGAKYEGEAVK LV+SYTHP+SNETER+ENIDTVMNWFTKEDFD VTLC
Sbjct: 56 NRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDTVMNWFTKEDFDFVTLC 115
Query: 96 YREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTSASSSHETMG 149
YREPDNV HRF PEAE RKLMIQQ+DRTIGYLVGATEKHSLQSTSASS HET+G
Sbjct: 116 YREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169
>gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 169
Score = 205 bits (522), Expect = 1e-53
Identities = 99/114 (86%), Positives = 105/114 (92%)
Query: 36 NKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLC 95
N+AAS HYSRGGAKYEGEAVK LV+SYTHP+SNETER+ENID VMNWFTKEDFD VTLC
Sbjct: 56 NRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDIVMNWFTKEDFDFVTLC 115
Query: 96 YREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTSASSSHETMG 149
YREPDNV HRF PEAE RKLMIQQ+DRTIGYLVGATEKHSLQSTSASS HET+G
Sbjct: 116 YREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 169 bits (428), Expect = 8e-43
Identities = 85/128 (66%), Positives = 90/128 (70%), Gaps = 31/128 (24%)
Query: 1 MSLDWGTDVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLV 60
M LDWGTD+DNSSFADCEK EGEAVKR LV
Sbjct: 1 MPLDWGTDIDNSSFADCEK-------------------------------EGEAVKRSLV 29
Query: 61 ESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQL 120
ESYTHPNSNETERRENIDT+MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+
Sbjct: 30 ESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQI 89
Query: 121 DRTIGYLV 128
RTIG ++
Sbjct: 90 GRTIGVII 97
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 169 bits (428), Expect = 8e-43
Identities = 85/128 (66%), Positives = 90/128 (70%), Gaps = 31/128 (24%)
Query: 1 MSLDWGTDVDNSSFADCEKGMRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLV 60
M LDWGTD+DNSSFADCEK EGEAVKR LV
Sbjct: 1 MPLDWGTDIDNSSFADCEK-------------------------------EGEAVKRSLV 29
Query: 61 ESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQL 120
ESYTHPNSNETERRENIDT+MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+
Sbjct: 30 ESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQI 89
Query: 121 DRTIGYLV 128
RTIG ++
Sbjct: 90 GRTIGVII 97
>gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7
[Homo sapiens]
Length = 458
Score = 99.4 bits (246), Expect = 1e-21
Identities = 47/91 (51%), Positives = 60/91 (65%)
Query: 37 KAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTVMNWFTKEDFDIVTLCY 96
+A S Y G Y+G AV R E H NETE R NIDTVM WFT+ED D+VTL +
Sbjct: 136 RAGSFFYPGGNVTYQGVAVTRSRKEGIAHNYKNETEWRANIDTVMAWFTEEDLDLVTLYF 195
Query: 97 REPDNVRHRFRPEAENRKLMIQQLDRTIGYL 127
EPD+ HR+ PE+ R+ M++Q+DRT+GYL
Sbjct: 196 GEPDSTGHRYGPESPERREMVRQVDRTVGYL 226
>gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5
(putative function) [Homo sapiens]
Length = 477
Score = 43.9 bits (102), Expect = 5e-05
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 35 WNKAASSHYSRGGAKYEGEAVK-RCLVESYTHPNSNETERRENIDTVMNWFT-KEDFDIV 92
W + ++ G A + G VK ++ P + + + ++ WFT KE ++
Sbjct: 124 WITNQRAGHTSGAAMWPGTDVKIHKRFPTHYMPYNESVSFEDRVAKIIEWFTSKEPINLG 183
Query: 93 TLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQST 139
L + +PD++ H P++ +I +D+ +GYL+ +K L +T
Sbjct: 184 LLYWEDPDDMGHHLGPDSPLMGPVISDIDKKLGYLIQMLKKAKLWNT 230
>gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4
(putative function) [Homo sapiens]
Length = 453
Score = 33.1 bits (74), Expect = 0.089
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 60 VESYTHPNSNETERRENIDTVMNWFTKEDFDIV--TLCYREPDNVRHRFRPE-AENRKLM 116
+ SY ++ E ++ + W + + TL + EPD H++ PE EN +
Sbjct: 147 ISSYFMNYNSSVSFEERLNNITMWLNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRV 206
Query: 117 IQQLDRTIGYLV 128
++++D IG LV
Sbjct: 207 LKKIDDLIGDLV 218
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 30.0 bits (66), Expect = 0.75
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 65 HPNSNETERRENIDTVMNWFTKEDFDIVTLCYREPDNVRH 104
HPN E R++ + + +FT+ED + + YR P H
Sbjct: 1509 HPNQGIIEHRDHPHSPIRYFTQEDINQGKVMYRPPPAAPH 1548
>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
Length = 888
Score = 27.3 bits (59), Expect = 4.9
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 72 ERRENIDTVMNWFTKEDFD---IVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLV 128
ERR I T++ W T D + + +PD H++ P ++++D+ +G L+
Sbjct: 283 ERR--ILTILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLM 340
Query: 129 GATEKHSL 136
++ L
Sbjct: 341 DGLKQLKL 348
>gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]
Length = 863
Score = 27.3 bits (59), Expect = 4.9
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 72 ERRENIDTVMNWFTKEDFD---IVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLV 128
ERR I T++ W T D + + +PD H++ P ++++D+ +G L+
Sbjct: 283 ERR--ILTILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLM 340
Query: 129 GATEKHSL 136
++ L
Sbjct: 341 DGLKQLKL 348
>gi|4505331 N-ethylmaleimide-sensitive factor attachment protein,
gamma [Homo sapiens]
Length = 312
Score = 26.9 bits (58), Expect = 6.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 54 AVKRCLVESYTHPNSNETERRENIDTVMNWFTKEDFDIVT 93
A +RC+ ESY+ P N +E ++ ++ + ++D D V+
Sbjct: 212 AAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVS 251
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,594,146
Number of Sequences: 37866
Number of extensions: 220082
Number of successful extensions: 456
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 440
Number of HSP's gapped (non-prelim): 19
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.