Guide to the Human Genome
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Name: LOC732160 Sequence: fasta or formatted (128aa) NCBI GI: 239748049
Description:

PREDICTED: similar to NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          5           1
 C cysteine            2.3          3           2
 D aspartate           6.2          8           1
 E glutamate           6.2          8           1
 F phenylalanine       3.1          4           1
 G glycine             5.5          7           1
 H histidine           3.1          4           1
 I isoleucine          3.9          5           1
 K lysine              8.6         11           2
 L leucine            11.7         15           2
 M methionine          0.8          1           1
 N asparagine          2.3          3           1
 P proline             6.2          8           1
 Q glutamine           4.7          6           1
 R arginine            4.7          6           1
 S serine              3.9          5           1
 T threonine           6.2          8           1
 V valine              9.4         12           2
 W tryptophan          2.3          3           1
 Y tyrosine            4.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to NADH dehydrogenase [ubiquinon... 
NDUFA10               0.796   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1...
SARS2                 0.024   seryl-tRNA synthetase 2 isoform b precursor 
EAPP                  0.012   E2F-associated phosphoprotein 
SARS2                 0.012   seryl-tRNA synthetase 2 isoform a precursor 
KEAP1                 0.012   kelch-like ECH-associated protein 1 
KEAP1                 0.012   kelch-like ECH-associated protein 1 
DUOX1                 0.012   dual oxidase 1 precursor 
DUOX1                 0.012   dual oxidase 1 precursor 
C9orf84               0.008   hypothetical protein LOC158401 isoform 2 
C9orf84               0.008   hypothetical protein LOC158401 isoform 1 
WDR87                 0.004   NYD-SP11 protein 
RP1                   0.004   retinitis pigmentosa RP1 protein 
NXPH1                 0.004   neurexophilin 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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