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Search of human proteins with 239747810
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo
sapiens]
(250 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo sap... 516 e-147
gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondri... 450 e-127
gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens] 446 e-126
gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo sap... 441 e-124
gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase ... 101 5e-22
gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] 34 0.14
gi|12083581 phosphoinositide-specific phospholipase C beta 1 iso... 30 2.0
gi|33356544 phosphoinositide-specific phospholipase C beta 1 iso... 30 2.0
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo... 28 7.5
gi|7657299 LBP-9 [Homo sapiens] 28 9.8
>gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo
sapiens]
Length = 250
Score = 516 bits (1328), Expect = e-147
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 60
MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS
Sbjct: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 60
Query: 61 SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 120
SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD
Sbjct: 61 SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 120
Query: 121 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 180
DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF
Sbjct: 121 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 180
Query: 181 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 240
QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL
Sbjct: 181 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 240
Query: 241 EQFIRQFICS 250
EQFIRQFICS
Sbjct: 241 EQFIRQFICS 250
>gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondrial
[Homo sapiens]
Length = 795
Score = 450 bits (1158), Expect = e-127
Identities = 223/244 (91%), Positives = 229/244 (93%), Gaps = 5/244 (2%)
Query: 7 ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQ 66
ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQ
Sbjct: 557 ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQ 616
Query: 67 EVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETE 126
EVLDRLIQCGLLVAEE RPACDTG++RLSRKLLWKPSGDFTDSDSDDF E +
Sbjct: 617 EVLDRLIQCGLLVAEETPGS-----RPACDTGRQRLSRKLLWKPSGDFTDSDSDDFGEAD 671
Query: 127 GQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQAT 186
G+Y RLSQQSHCPDFFLFLC LLSPLLKAFAQAAAFLRQGQLPDTE GYT+QLFQFLQAT
Sbjct: 672 GRYFRLSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTELGYTEQLFQFLQAT 731
Query: 187 AQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQ 246
AQEEGIFECADPKLAISA+WTFRDLGVLQQTPSPAGPRLHLSPTFAS DNQEKLEQFIRQ
Sbjct: 732 AQEEGIFECADPKLAISAVWTFRDLGVLQQTPSPAGPRLHLSPTFASLDNQEKLEQFIRQ 791
Query: 247 FICS 250
FICS
Sbjct: 792 FICS 795
>gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]
Length = 224
Score = 446 bits (1147), Expect = e-126
Identities = 224/250 (89%), Positives = 224/250 (89%), Gaps = 26/250 (10%)
Query: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 60
MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK
Sbjct: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK---- 56
Query: 61 SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 120
LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD
Sbjct: 57 ----------------------LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 94
Query: 121 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 180
DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF
Sbjct: 95 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 154
Query: 181 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 240
QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL
Sbjct: 155 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 214
Query: 241 EQFIRQFICS 250
EQFIRQFICS
Sbjct: 215 EQFIRQFICS 224
>gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo
sapiens]
Length = 224
Score = 441 bits (1135), Expect = e-124
Identities = 223/250 (89%), Positives = 223/250 (89%), Gaps = 26/250 (10%)
Query: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 60
MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK
Sbjct: 1 MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK---- 56
Query: 61 SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 120
LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD
Sbjct: 57 ----------------------LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 94
Query: 121 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 180
DFKETEGQYSRLSQQSHCPDFFLFLC LLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF
Sbjct: 95 DFKETEGQYSRLSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 154
Query: 181 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 240
QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL
Sbjct: 155 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 214
Query: 241 EQFIRQFICS 250
EQFIRQFICS
Sbjct: 215 EQFIRQFICS 224
>gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase
[Homo sapiens]
Length = 828
Score = 101 bits (252), Expect = 5e-22
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 4/220 (1%)
Query: 31 LLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEELVREQWLR 90
L+SQ +L R+ L +LL + + PCQ+ Y C E + + IQ G+L E ++ +
Sbjct: 609 LISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDIS 668
Query: 91 VRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLCCLLS 150
A ++L L W+ D D DSD +E Y ++SQ F FL LL
Sbjct: 669 PSLAEQQWDKKLPEPLSWR--SDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLG 726
Query: 151 PLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFL-QATAQEEGIF-ECADPKLAISAIWTF 208
PLL+A++ AA F+ P E Y +L ++L T + ++ E A L +A+ F
Sbjct: 727 PLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVKNAVKMF 786
Query: 209 RDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFI 248
+D+GV ++T L LS TF Q N++KL ++I F+
Sbjct: 787 KDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826
>gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]
Length = 163
Score = 33.9 bits (76), Expect = 0.14
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 4 PPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLL 48
P PA L G PP+G W+ Q +QN ++ QILL +H L
Sbjct: 105 PLPASFPAVLPIGEQPPEGQWQHQAEHQQNQNRVWWQILLFLHNL 149
>gi|12083581 phosphoinositide-specific phospholipase C beta 1 isoform
a [Homo sapiens]
Length = 1216
Score = 30.0 bits (66), Expect = 2.0
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 19 PPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQ--SSYCYCQEVLDRLIQCG 76
P G ++ L E+ ++++ L Q LL L+ Q S +E + LIQ
Sbjct: 983 PDHGSSTIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQYYSEKYQKREHIKLLIQKL 1042
Query: 77 LLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRL 132
VAEE Q +++ C+ ++ L +K+ K T++ S D + E + + +
Sbjct: 1043 TDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEEEKTEM 1098
>gi|33356544 phosphoinositide-specific phospholipase C beta 1 isoform
b [Homo sapiens]
Length = 1173
Score = 30.0 bits (66), Expect = 2.0
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 19 PPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQ--SSYCYCQEVLDRLIQCG 76
P G ++ L E+ ++++ L Q LL L+ Q S +E + LIQ
Sbjct: 983 PDHGSSTIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQYYSEKYQKREHIKLLIQKL 1042
Query: 77 LLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRL 132
VAEE Q +++ C+ ++ L +K+ K T++ S D + E + + +
Sbjct: 1043 TDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEEEKTEM 1098
>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform
b [Homo sapiens]
Length = 1173
Score = 28.1 bits (61), Expect = 7.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 198 PKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQE 238
P L+ + T G Q TPSPAGP L P D +
Sbjct: 151 PALSRNVGMTVSQKGGPQPTPSPAGPGTQLGPITGEMDEAD 191
>gi|7657299 LBP-9 [Homo sapiens]
Length = 479
Score = 27.7 bits (60), Expect = 9.8
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 122 FKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQ 167
FK+ E Q S ++ P LC SP +K + +L QGQ
Sbjct: 29 FKQEEPQLSP-ENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQ 73
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,117,437
Number of Sequences: 37866
Number of extensions: 505505
Number of successful extensions: 1397
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1383
Number of HSP's gapped (non-prelim): 12
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.