Search of human proteins with 239747780

Search of human proteins with 239747780

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo
sapiens]
         (546 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo ...  1124   0.0  
gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo ...   915   0.0  
gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens]        217   3e-56
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]                   127   3e-29
gi|24308368 EP300 interacting inhibitor of differentiation 2B [H...    51   3e-06
gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]                     33   0.67 
gi|18034775 PHD finger protein 20 [Homo sapiens]                       31   3.3  
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    29   9.7  
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    29   9.7  
gi|190341065 CP110 protein [Homo sapiens]                              29   9.7  

>gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo
           sapiens]
          Length = 546

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 546/546 (100%), Positives = 546/546 (100%)

Query: 1   MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
           MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA
Sbjct: 1   MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60

Query: 61  GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
           GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT
Sbjct: 61  GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120

Query: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
           HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP
Sbjct: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180

Query: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
           RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA
Sbjct: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240

Query: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
           MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV
Sbjct: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300

Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
           SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN
Sbjct: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360

Query: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
           LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT
Sbjct: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420

Query: 421 LTTALTASEATSPLTEELGYDEFINRECWLATPLSTQPSVDLPNHGRHSESTGTQRTMLY 480
           LTTALTASEATSPLTEELGYDEFINRECWLATPLSTQPSVDLPNHGRHSESTGTQRTMLY
Sbjct: 421 LTTALTASEATSPLTEELGYDEFINRECWLATPLSTQPSVDLPNHGRHSESTGTQRTMLY 480

Query: 481 LSVGCVGQPLWNPQAPVTSPTLTFEPGSCGHRLMVMAKSSSFAPCDPLPPLWTDPFKDQS 540
           LSVGCVGQPLWNPQAPVTSPTLTFEPGSCGHRLMVMAKSSSFAPCDPLPPLWTDPFKDQS
Sbjct: 481 LSVGCVGQPLWNPQAPVTSPTLTFEPGSCGHRLMVMAKSSSFAPCDPLPPLWTDPFKDQS 540

Query: 541 GSVNSE 546
           GSVNSE
Sbjct: 541 GSVNSE 546


>gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo
           sapiens]
          Length = 488

 Score =  915 bits (2366), Expect = 0.0
 Identities = 448/448 (100%), Positives = 448/448 (100%)

Query: 1   MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
           MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA
Sbjct: 1   MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60

Query: 61  GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
           GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT
Sbjct: 61  GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120

Query: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
           HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP
Sbjct: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180

Query: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
           RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA
Sbjct: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240

Query: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
           MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV
Sbjct: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300

Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
           SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN
Sbjct: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360

Query: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
           LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT
Sbjct: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420

Query: 421 LTTALTASEATSPLTEELGYDEFINREC 448
           LTTALTASEATSPLTEELGYDEFINREC
Sbjct: 421 LTTALTASEATSPLTEELGYDEFINREC 448


>gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens]
          Length = 156

 Score =  217 bits (552), Expect = 3e-56
 Identities = 110/120 (91%), Positives = 116/120 (96%), Gaps = 1/120 (0%)

Query: 341 EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE 400
           EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE
Sbjct: 27  EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE 86

Query: 401 AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRECWLATPLSTQPSV 460
           AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE WL++  +++ S+
Sbjct: 87  AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE-WLSSETTSRESL 145


>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
          Length = 236

 Score =  127 bits (318), Expect = 3e-29
 Identities = 72/111 (64%), Positives = 77/111 (69%), Gaps = 12/111 (10%)

Query: 348 SNTGQAGLAVLPNLCLQHPLVIVLGINY-----------PIAPSRMQELAEGRRRLAEAC 396
           S  G  GLA LP L L+HPL  VLGINY           PIAP R+QEL E RRR  EAC
Sbjct: 127 SRHGNGGLAALPYLRLRHPLS-VLGINYQQFLRHYLENYPIAPGRIQELEERRRRFVEAC 185

Query: 397 RAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 447
           RAREAAFDAE QRNP R+D DILT T ALTASE  +PL EELG D+FINRE
Sbjct: 186 RAREAAFDAEYQRNPHRVDLDILTFTIALTASEVINPLIEELGCDKFINRE 236


>gi|24308368 EP300 interacting inhibitor of differentiation 2B [Homo
           sapiens]
          Length = 161

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)

Query: 382 MQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTE 436
           +++  E RR   E C+AREAAFDA+    P +MD   +  T ALTASEA SPL +
Sbjct: 111 LRDFEERRRLFVEGCKAREAAFDAD----PPQMDFAAVAFTVALTASEALSPLAD 161


>gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]
          Length = 187

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 20/51 (39%), Positives = 25/51 (49%)

Query: 397 RAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 447
           R RE A D   Q +  +   D L     L +    + LTEELG DE I+RE
Sbjct: 137 RTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGCDEIIDRE 187


>gi|18034775 PHD finger protein 20 [Homo sapiens]
          Length = 1012

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 258 DRNMKGLLGHQGQKQFQ--TNAYSPADSPVHRCPAASRKLHIQNVSLEGSGVVKWVRPVE 315
           DR  +GLL  Q Q QF   T+  S  D   HR  +  ++L +    L+ +G ++   P+ 
Sbjct: 925 DRGGEGLLSSQHQWQFNLLTHVESLQDEVTHRMDSIEKELDVLESWLDYTGELEPPEPL- 983

Query: 316 RSKAHTRLPQNQNTAEEIL 334
                 RLPQ ++  +++L
Sbjct: 984 -----ARLPQLKHCIKQLL 997


>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 529

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)

Query: 196 WRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGY---ELPVPKCV---QAMLPRQQLGI 249
           W+   +++   G+   ++AK A   +    AAV Y   E  + + V   Q  +PR Q  +
Sbjct: 98  WQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKV 157

Query: 250 QEFR---EDAKDRNMKGLLGHQGQKQFQTNAYSPADSPV----HRCP--AASRKLHIQNV 300
           + +R   +++++ + +   G   +++       P   P       CP   A R    +  
Sbjct: 158 RGYRYLEDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEEH 217

Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
            L+G GV  W  P+ +++        +NTAE +    T   A     S+   A L +LP 
Sbjct: 218 PLQG-GVEPW-EPLGQAQGF------ENTAETLRALSTRPSAGAGSGSSCDPAPLQILPA 269

Query: 361 LCL-QHPLVIVLGINYPIAPSR 381
           +     P V  L  +YP  P R
Sbjct: 270 VGRGPGPRVTALCTSYPQGPPR 291


>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 503

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)

Query: 196 WRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGY---ELPVPKCV---QAMLPRQQLGI 249
           W+   +++   G+   ++AK A   +    AAV Y   E  + + V   Q  +PR Q  +
Sbjct: 72  WQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKV 131

Query: 250 QEFR---EDAKDRNMKGLLGHQGQKQFQTNAYSPADSPV----HRCP--AASRKLHIQNV 300
           + +R   +++++ + +   G   +++       P   P       CP   A R    +  
Sbjct: 132 RGYRYLEDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEEH 191

Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
            L+G GV  W  P+ +++        +NTAE +    T   A     S+   A L +LP 
Sbjct: 192 PLQG-GVEPW-EPLGQAQGF------ENTAETLRALSTRPSAGAGSGSSCDPAPLQILPA 243

Query: 361 LCL-QHPLVIVLGINYPIAPSR 381
           +     P V  L  +YP  P R
Sbjct: 244 VGRGPGPRVTALCTSYPQGPPR 265


>gi|190341065 CP110 protein [Homo sapiens]
          Length = 991

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 14/121 (11%)

Query: 380 SRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELG 439
           S+M    E R+RL E    + +   AEQ+R   R+  +I      L   +A +    EL 
Sbjct: 647 SKMLAFEEMRKRLEEQHAQQLSLLIAEQEREQERLQKEIEEQEKMLKEKKAMTAEASELD 706

Query: 440 YDEFINRECW--------LATPLSTQPSVDLPNHGRHSESTG-TQRTMLYLSVGCVGQPL 490
            +  +  E W        L T LS   S+    H  +S S+G T   M Y  V     P 
Sbjct: 707 INNAVELE-WRKISDSSLLETMLSQADSL----HTSNSNSSGFTNSAMQYSFVSANEAPF 761

Query: 491 W 491
           +
Sbjct: 762 Y 762


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,325,429
Number of Sequences: 37866
Number of extensions: 1020924
Number of successful extensions: 2594
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2585
Number of HSP's gapped (non-prelim): 13
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.