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Search of human proteins with 239747088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens] 885 0.0
gi|21389613 tektin 4 [Homo sapiens] 718 0.0
gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens] 634 0.0
gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens] 357 2e-98
gi|13994250 tektin 3 [Homo sapiens] 245 5e-65
gi|16753231 tektin 1 [Homo sapiens] 235 5e-62
gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens] 229 3e-60
gi|75677606 hypothetical protein LOC100132288 [Homo sapiens] 224 1e-58
gi|21389569 tektin 5 [Homo sapiens] 192 7e-49
gi|16507950 tektin 2 [Homo sapiens] 155 5e-38
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 48 2e-05
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 45 1e-04
gi|81295809 pericentrin [Homo sapiens] 45 1e-04
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 45 1e-04
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 44 3e-04
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 43 5e-04
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 43 5e-04
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 43 5e-04
gi|92091575 coiled-coil domain containing 57 [Homo sapiens] 41 0.002
gi|21735548 centrosomal protein 2 [Homo sapiens] 40 0.003
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 40 0.003
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 40 0.004
gi|4504063 golgin 97 [Homo sapiens] 40 0.006
gi|56550043 sarcolemma associated protein [Homo sapiens] 39 0.007
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 39 0.010
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 39 0.010
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 39 0.012
gi|7661844 coiled-coil domain containing 22 [Homo sapiens] 39 0.012
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 38 0.016
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 38 0.016
>gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 445
Score = 885 bits (2288), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAF 60
MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATA LEVWFQNCYARYRQAF
Sbjct: 1 MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAF 60
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA
Sbjct: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
Query: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNI 180
ETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNI
Sbjct: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNI 180
Query: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT 240
QELLKRAIMQAVSQI LN EHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT
Sbjct: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT 240
Query: 241 FQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNL 300
FQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNL
Sbjct: 241 FQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNL 300
Query: 301 AFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSH 360
AFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRL LLSH
Sbjct: 301 AFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSH 360
Query: 361 RPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNS 420
RPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNS
Sbjct: 361 RPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNS 420
Query: 421 VFIDRQKCMAHRTCYPTILQLAGYQ 445
VFIDRQKCMAHRTCYPTILQLAGYQ
Sbjct: 421 VFIDRQKCMAHRTCYPTILQLAGYQ 445
>gi|21389613 tektin 4 [Homo sapiens]
Length = 435
Score = 718 bits (1854), Expect = 0.0
Identities = 369/439 (84%), Positives = 392/439 (89%), Gaps = 13/439 (2%)
Query: 14 QTVPPYELPCKEYDVARNTGAYTSSGLATAX-------LEVWFQNCYARYRQAFANCNQS 66
QTVPP ELPCKEYDVARNTGAYTSSGLATA LE WFQNCYARY QAFA+ +QS
Sbjct: 3 QTVPPCELPCKEYDVARNTGAYTSSGLATASFRTSKYLLEEWFQNCYARYHQAFADRDQS 62
Query: 67 ERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLL 126
ER Q HESQQLA ETQALAQ TQQDST VGERLQDT+SWKSELQRE+EALAAET+LLL
Sbjct: 63 ER--QRHESQQLATETQALAQRTQQDSTRTVGERLQDTHSWKSELQREMEALAAETNLLL 120
Query: 127 AQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKR 186
AQKQRLERALDA EVPFSITTDN+QC +R +H NL+RDHVETELLKEAELIRNIQELLKR
Sbjct: 121 AQKQRLERALDATEVPFSITTDNLQCRERREHPNLVRDHVETELLKEAELIRNIQELLKR 180
Query: 187 AIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGP 246
IMQAVSQI LN EH E CEMDWSDK+EAYN+D+TCGRHHSQSTEVQAHP+STTFQE
Sbjct: 181 TIMQAVSQIRLNREHKETCEMDWSDKMEAYNIDETCGRHHSQSTEVQAHPYSTTFQE--- 237
Query: 247 RSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRC 306
SASTPETR KFTQDNLC AQRERL SANL VLVDCILRDTSEDL LQCDAVNLAFGRRC
Sbjct: 238 -SASTPETRAKFTQDNLCRAQRERLASANLRVLVDCILRDTSEDLRLQCDAVNLAFGRRC 296
Query: 307 EELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQL 366
EELEDAR+KL HHLHK LREITDQEHNV ALK+AIKDKE PLH+AQTRL L SHRPNM+L
Sbjct: 297 EELEDARYKLHHHLHKTLREITDQEHNVAALKQAIKDKEAPLHVAQTRLYLRSHRPNMEL 356
Query: 367 CRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQ 426
CRDAAQFRL+SEVEEL S+TALREKLL+AEQSLRNL+DIHMSLEKD+ AMTNS+FIDRQ
Sbjct: 357 CRDAAQFRLLSEVEELNMSLTALREKLLEAEQSLRNLEDIHMSLEKDIAAMTNSLFIDRQ 416
Query: 427 KCMAHRTCYPTILQLAGYQ 445
KCMAHRT YPTILQLAGYQ
Sbjct: 417 KCMAHRTRYPTILQLAGYQ 435
>gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 507
Score = 634 bits (1636), Expect = 0.0
Identities = 358/551 (64%), Positives = 375/551 (68%), Gaps = 150/551 (27%)
Query: 1 MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAF 60
MVQTD+LLPE APQTVPP ELPCKEYDVA F
Sbjct: 1 MVQTDMLLPEPAPQTVPPCELPCKEYDVA------------------------------F 30
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
A+CNQSERELQGH+SQQLAAE QALAQPTQQDS CRVGERLQD +SW SELQ EVEALAA
Sbjct: 31 ADCNQSERELQGHKSQQLAAEIQALAQPTQQDSKCRVGERLQDMHSWNSELQGEVEALAA 90
Query: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQH---------TNLLRDH--VETE 169
ETDLLLAQKQRLE ALDAMEVPFSI TDNMQC+QRHQH T LL+ + ++
Sbjct: 91 ETDLLLAQKQRLEHALDAMEVPFSIATDNMQCNQRHQHANLVRDHVETELLKAYPPAPSQ 150
Query: 170 LLK--------------------------------------------EAELIRNIQELLK 185
LK EAELIRNIQELLK
Sbjct: 151 CLKNCCSSRKPSASNKGVCEVMETLTVQEEANPGTEGCRTRALAHKEEAELIRNIQELLK 210
Query: 186 RAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERG 245
R I+QAVSQI LN EHMEICEMDWSDKVEAYNLD+TCGRH SQSTE
Sbjct: 211 RVIVQAVSQIRLNREHMEICEMDWSDKVEAYNLDETCGRHRSQSTE-------------- 256
Query: 246 PRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRR 305
PRSASTPETRTKFTQDNLC AQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRR
Sbjct: 257 PRSASTPETRTKFTQDNLCRAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRR 316
Query: 306 CEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQ 365
CEELEDARHKLQHHL KMLREITDQEHN+VALKEAIKDKE PLHIAQTRL LLSHRPNM+
Sbjct: 317 CEELEDARHKLQHHLQKMLREITDQEHNMVALKEAIKDKEAPLHIAQTRLYLLSHRPNME 376
Query: 366 LCRDAAQFR--------------------------------------------------- 374
LCRDAAQFR
Sbjct: 377 LCRDAAQFRYRHDTGQVMGRGPPSARDLCPRGLTPPSATSSSQEEAPSDKPQLTPPNTPK 436
Query: 375 LVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQKCMAHRTC 434
LVSE+EELYKSITAL EKLLQAEQSL NL+DIHMSLEKDVTAMTNS+F+DRQ CMAH TC
Sbjct: 437 LVSELEELYKSITALWEKLLQAEQSLHNLEDIHMSLEKDVTAMTNSLFLDRQNCMAHHTC 496
Query: 435 YPTILQLAGYQ 445
YPTILQLAGYQ
Sbjct: 497 YPTILQLAGYQ 507
>gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 333
Score = 357 bits (915), Expect = 2e-98
Identities = 200/293 (68%), Positives = 211/293 (72%), Gaps = 58/293 (19%)
Query: 16 VPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAFANCNQSERELQGHES 75
+PP ELPCKEYDVARNTG Y SSGLATA LEVWFQNCYARY QAFANCNQSE+ELQGHES
Sbjct: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
Query: 76 QQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERA 135
QQLAAETQALAQ TQQDST RVGE+LQDT+SWKSELQREVEALAAETDLLLAQKQRLE A
Sbjct: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
Query: 136 LDAMEVPFSITTDNMQCSQRHQHTN---------LLRDH--------------------- 165
LDA E PFSI TDN+QCSQ HQH N LL+ H
Sbjct: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN 180
Query: 166 ------VETELL-------------------KEAELIRNIQELLKRAIMQAVSQIXLNXE 200
+ET + KEAELIRNIQELLKRAI+QAVSQI LN E
Sbjct: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE 240
Query: 201 HMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHP--HSTTFQERGPRSAST 251
H EICEMDWSDKVEAYNLD+TCGRHHSQSTEVQAHP H +E GP SA T
Sbjct: 241 HTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHPALHHLP-REGGPSSAPT 292
>gi|13994250 tektin 3 [Homo sapiens]
Length = 490
Score = 245 bits (626), Expect = 5e-65
Identities = 146/388 (37%), Positives = 218/388 (56%), Gaps = 11/388 (2%)
Query: 64 NQSERELQGHESQQLAAETQALAQP-------TQQDSTCRVGERLQDTNSWKSELQREVE 116
N E H S++L +T L Q TQ D+T +GER+ D WKSE+ E++
Sbjct: 106 NYQESNTSRHNSEKLRVDTSRLIQDKYQQTRKTQADTTQNLGERVNDIGFWKSEIIHELD 165
Query: 117 ALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAEL 176
+ ET+ L K+RLERAL E P + + + ++ +L+ D VE +LL E +
Sbjct: 166 EMIGETNALTDVKKRLERALMETEAPLQVARECLFHREKRMGIDLVHDEVEAQLLTEVDT 225
Query: 177 IRNIQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHP 236
I QE +K + +A++Q+ N E D SDK AY +D C HH ++T
Sbjct: 226 ILCCQERMKLHLDKAIAQLAANRASQHELEKDLSDKQTAYRIDDKC--HHLRNTSDGVGY 283
Query: 237 HSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCD 296
ER + S PE+ KFT DN+ +Q ER SA L ++ +L T+ ++ Q +
Sbjct: 284 FRGV--ERVDATVSVPESWAKFTDDNILRSQSERAASAKLRDDIENLLVVTANEMWNQFN 341
Query: 297 AVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLX 356
VNL+F R E DA++K+Q HL K L+EI E + ++K+AIKDK L +AQTRL
Sbjct: 342 KVNLSFTNRIAETADAKNKIQTHLAKTLQEIFQTEMTIESIKKAIKDKTAFLKVAQTRLD 401
Query: 357 LLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTA 416
+ RPN++LCRD AQ RLV+EV E+ +I L+++L AE +L++L I +LE D+
Sbjct: 402 ERTRRPNIELCRDMAQLRLVNEVHEVDDTIQTLQQRLRDAEDTLQSLVHIKATLEYDLAV 461
Query: 417 MTNSVFIDRQKCMAHRTCYPTILQLAGY 444
NS++ID++KCM+ R YP L+L G+
Sbjct: 462 KANSLYIDQEKCMSMRKSYPNTLRLVGF 489
>gi|16753231 tektin 1 [Homo sapiens]
Length = 418
Score = 235 bits (600), Expect = 5e-62
Identities = 139/382 (36%), Positives = 216/382 (56%), Gaps = 6/382 (1%)
Query: 55 RYRQAFANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQRE 114
+Y +A A ++SER + ESQ+L E + + +Q D ++ +RL++ WK EL +
Sbjct: 23 QYHRADAQRSRSERLVA--ESQRLVDEIEKTTRKSQSDVNKKLEQRLEEVQFWKKELDDK 80
Query: 115 VEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEA 174
+E L TD LL K RLE+AL+ ++ P IT + ++ +L+ D VE EL+KEA
Sbjct: 81 LEQLVNVTDDLLIYKIRLEKALETLKEPLHITETCLAYREKRIGIDLVHDTVEHELIKEA 140
Query: 175 ELIRNIQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQA 234
E+I+ I LL R + +A QI +N E D DK A +D C ++ S ++
Sbjct: 141 EIIQGIMALLTRTLEEASEQIRMNRSAKYNLEKDLKDKFVALTIDDICFSLNNNSPNIRY 200
Query: 235 HPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQ 294
++ + P S S E F+ N+ A ++R +S L LVD IL T+ DL Q
Sbjct: 201 SENAVRIE---PNSVSL-EDWLDFSSTNVEKADKQRNNSLMLKALVDRILSQTANDLRKQ 256
Query: 295 CDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTR 354
CD V+ AF ++ +DAR KL HL K++ EI QE N+ AL++AI D+E P +A TR
Sbjct: 257 CDVVDTAFKNGLKDTKDARDKLADHLAKVMEEIASQEKNITALEKAILDQEGPAKVAHTR 316
Query: 355 LXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDV 414
L +HRPN++LCRD AQ+RL+ EV+E+ ++ L+E L QA+ L+ L ++L++++
Sbjct: 317 LETRTHRPNVELCRDVAQYRLMKEVQEITHNVARLKETLAQAQAELKGLHRRQLALQEEI 376
Query: 415 TAMTNSVFIDRQKCMAHRTCYP 436
N+++ID CM R P
Sbjct: 377 QVKENTIYIDEVLCMQMRKSIP 398
>gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 254
Score = 229 bits (585), Expect = 3e-60
Identities = 123/172 (71%), Positives = 130/172 (75%), Gaps = 31/172 (18%)
Query: 1 MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAF 60
MVQTD+LLPE PQT+PP ELPCKEYD AF
Sbjct: 1 MVQTDMLLPEPVPQTMPPCELPCKEYD-------------------------------AF 29
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
ANCNQSERELQGHESQQLAAETQALAQ TQQDST RVGE+LQDT+SWKSELQREVEALAA
Sbjct: 30 ANCNQSERELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAA 89
Query: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLK 172
ETDLLLAQKQRLE ALDA E PFSI TDN+QCSQ HQ+ NL+RDHVETELLK
Sbjct: 90 ETDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQNANLMRDHVETELLK 141
>gi|75677606 hypothetical protein LOC100132288 [Homo sapiens]
Length = 129
Score = 224 bits (571), Expect = 1e-58
Identities = 109/110 (99%), Positives = 109/110 (99%)
Query: 246 PRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRR 305
PRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFG R
Sbjct: 20 PRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGCR 79
Query: 306 CEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRL 355
CEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRL
Sbjct: 80 CEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRL 129
>gi|21389569 tektin 5 [Homo sapiens]
Length = 485
Score = 192 bits (487), Expect = 7e-49
Identities = 115/355 (32%), Positives = 189/355 (53%), Gaps = 5/355 (1%)
Query: 91 QDSTCR-VGERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDN 149
Q+ TCR +G+RL D WKSEL E++ L E L K+RLE A + + P + +
Sbjct: 134 QEGTCRNLGQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLECAANEVNCPLQVALEC 193
Query: 150 MQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAVSQIXLNXEHMEICEMDW 209
+ ++ +L+ D+VE L++E +L++ QE +++ + Q+ N + + E D
Sbjct: 194 LYHREKRIGIDLVHDNVEKNLIREVDLLKCCQEQMRKLAQRIDIQMRDNRDAQHVLERDL 253
Query: 210 SDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRE 269
DK A +D+ C + S + H E+ + S PET KF+ DN+ H+Q
Sbjct: 254 EDKSSAQCIDEKCFNLRNTSDCISFF-HG---MEKIDGTISVPETWAKFSNDNIKHSQNM 309
Query: 270 RLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITD 329
R +S L + + S+ + Q NLAF R E+ D ++KLQ L K L+EI
Sbjct: 310 RANSIQLREEAEHLFETLSDQMWRQFTDTNLAFNARISEVTDVKNKLQTQLAKTLQEIFQ 369
Query: 330 QEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITAL 389
E+ ++ L+ +I KE PL +AQTRL + RPNM+LCRD Q +LV+EV + ++ L
Sbjct: 370 AENTIMLLERSIMAKEGPLKVAQTRLECRTRRPNMELCRDIPQLKLVNEVFTIDDTLQTL 429
Query: 390 REKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQKCMAHRTCYPTILQLAGY 444
+ +L + + +L+ L LE ++ N++ ID++KCM R +P +L G+
Sbjct: 430 KLRLRETQDTLQLLVMTKCRLEHELAIKANTLCIDKEKCMGMRKTFPCTPRLVGH 484
>gi|16507950 tektin 2 [Homo sapiens]
Length = 430
Score = 155 bits (393), Expect = 5e-38
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 12/371 (3%)
Query: 69 ELQGHESQQLAAETQALAQPT-------QQDSTCRVGERLQDTNSWKSELQREVEALAAE 121
+LQ S Q+ E + L T + D+ R+ ER+ N WK L + + L AE
Sbjct: 29 QLQRDASHQIRQEARVLRNETNNQTIWDEHDNRTRLVERIDTVNRWKEMLDKCLTDLDAE 88
Query: 122 TDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQ 181
D L K+ E+ L A +P + + + + + ++++D VE EL KE E+I +
Sbjct: 89 IDALTQMKESAEQNLQAKNLPLDVAIECLTLRESRRDIDVVKDPVEDELHKEVEVIEATK 148
Query: 182 ELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTF 241
+ L++ + QA Q+ L E + D K+E +D+ C + +S + T
Sbjct: 149 KALQQKVSQAFEQLCLLQEVQQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPT-- 206
Query: 242 QERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLA 301
R P ++T + F++ N A+ E + L + +T+ +L Q A A
Sbjct: 207 --RVPDGSTTLQQWDDFSRFNKDRAEAEMKAATELREATALTIAETNNELEAQRVATEFA 264
Query: 302 FGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHR 361
F +R E+E +L+ L EI + + ++ L+E ++ K L ++ TRL ++R
Sbjct: 265 FRKRLREMEKVYSELKWQEKNTLEEIAELQEDIRHLEEDLRTKLLSLKLSHTRLEARTYR 324
Query: 362 PNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSV 421
PN++LCRD AQ+ L EV +L +I AL++KL QA+ +L L L+ D+ NS+
Sbjct: 325 PNVELCRDQAQYGLTDEVHQLEATIAALKQKLAQAQDALDALCKHLARLQADIACKANSM 384
Query: 422 FIDRQKCMAHR 432
+D KCM R
Sbjct: 385 LLD-TKCMDTR 394
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 48.1 bits (113), Expect = 2e-05
Identities = 74/394 (18%), Positives = 156/394 (39%), Gaps = 42/394 (10%)
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
A + + +L E + AA + + Q++ + ++++ S SELQ ++E+ A
Sbjct: 1069 AQIAELKMQLAKKEEELQAALARVEEEAAQKNMALK---KIRELESQISELQEDLESERA 1125
Query: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNMQC-----SQRHQHTNLLRDHVETELLKEAE 175
+ QK+ L L+A++ T D+ S+R Q N+L+ +E E
Sbjct: 1126 SRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEA 1185
Query: 176 LIRNIQELLKRAI------MQAVSQIXLNXEH----MEICEMDWSDKVEAYNLDKTCGRH 225
I+ +++ +A+ ++ ++ N E +E + +++V+ K H
Sbjct: 1186 QIQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEH 1245
Query: 226 HSQSTEVQAHPHSTTFQ--ERGPRSASTPETRTKFTQDN----LCHAQRERLDSANLWVL 279
+ E Q F ER + T+ + DN L + + +
Sbjct: 1246 KRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQSDSKSSKLTKDFSA 1305
Query: 280 VDCILRDTSEDLG-------------LQCDAVNLAFGRRCEELEDARHKLQHHLHKMLRE 326
++ L+DT E L Q + +F + EE E+A+H L+ + + +
Sbjct: 1306 LESQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLEEEEEAKHNLEKQIATLHAQ 1365
Query: 327 ITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCR----DAAQFRLVSEVEEL 382
+ D + + ++ EE Q L LS R ++ + + RL E+++L
Sbjct: 1366 VADMKKKMEDSVGCLETAEEVKRKLQKDLEGLSQRHEEKVAAYDKLEKTKTRLQQELDDL 1425
Query: 383 YKSITALREKLLQAEQSLRNLKDIHMSLEKDVTA 416
+ R+ E+ + + ++ EK ++A
Sbjct: 1426 LVDLDHQRQSACNLEKKQKKFDQL-LAEEKTISA 1458
Score = 45.4 bits (106), Expect = 1e-04
Identities = 73/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)
Query: 67 ERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLL 126
E EL +QLAAE + T Q +LQ+ ++EL E E L A L
Sbjct: 851 EEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRAR---LT 907
Query: 127 AQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKR 186
A+KQ LE +E + + +C H++ E + ++ +NIQEL ++
Sbjct: 908 AKKQELEEICHDLEA--RVEEEEERC-----------QHLQAE---KKKMQQNIQELEEQ 951
Query: 187 AIMQAVSQIXLNXEHMEI-CEMDWSDKVEAYNLDKTCG-RHHSQSTEVQAHPHSTTFQER 244
+ ++ L E + ++ ++ + D+ C + E + +T E
Sbjct: 952 LEEEESARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEE 1011
Query: 245 GPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGR 304
+S S + + K + ++ D E L + +
Sbjct: 1012 EEKSKSLAKLKNKH----------------------EAMITDLEERLRRE--------EK 1041
Query: 305 RCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNM 364
+ +ELE R KL+ + +I + + + LK + KEE L A R+ + + NM
Sbjct: 1042 QRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNM 1101
Query: 365 QLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNL 403
L + L S++ EL + + + R +AE+ R+L
Sbjct: 1102 ALKKIR---ELESQISELQEDLESERASRNKAEKQKRDL 1137
Score = 35.0 bits (79), Expect = 0.14
Identities = 75/381 (19%), Positives = 144/381 (37%), Gaps = 70/381 (18%)
Query: 65 QSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDL 124
Q +EL E++Q + + L Q + ++ R E+L++ K L++++ L A+
Sbjct: 1311 QDTQELLQEENRQKLSLSTKLKQVEDEKNSFR--EQLEEEEEAKHNLEKQIATLHAQ--- 1365
Query: 125 LLAQKQRLERALDAME----VPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNI 180
+ K+++E ++ +E V + D SQRH+ D +E + L + +
Sbjct: 1366 VADMKKKMEDSVGCLETAEEVKRKLQKDLEGLSQRHEEKVAAYDKLEKT---KTRLQQEL 1422
Query: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT 240
+LL + L+ + C ++ K D+ + S +
Sbjct: 1423 DDLL----------VDLDHQRQSACNLEKKQK----KFDQLLAEEKTISAKYA------- 1461
Query: 241 FQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNL 300
+ER A E TK +L A E ++ + + +N
Sbjct: 1462 -EERDRAEAEAREKETKAL--SLARALEEAMEQK------------------AELERLNK 1500
Query: 301 AFGRRCEEL---EDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXL 357
F E+L +D K H L K R + Q + E ++D+ + A+ RL +
Sbjct: 1501 QFRTEMEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEV 1560
Query: 358 LSHRPNMQLCRD---------AAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHM 408
Q RD + +LV +V E+ L ++ Q ++ K + M
Sbjct: 1561 NLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREME---AELEDERKQRSMAVAARKKLEM 1617
Query: 409 SLEKDVTAMTNSVFIDRQKCM 429
L KD+ A +S +R + +
Sbjct: 1618 DL-KDLEAHIDSANKNRDEAI 1637
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 45.4 bits (106), Expect = 1e-04
Identities = 76/375 (20%), Positives = 153/375 (40%), Gaps = 41/375 (10%)
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERL-------QDTNSWKSELQR 113
A + R+L+ Q A T A + Q DS +GE++ Q KSEL+
Sbjct: 1173 AEFQKMRRDLEEATLQHEA--TAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSELKM 1230
Query: 114 EVEALAAETDLLLAQKQRLERALDAMEVPFS-ITTDNMQCSQRHQHTNLLRDHVETELLK 172
E++ +A+ + L K +ER +E FS I + Q +Q N+ + ++T+ +
Sbjct: 1231 EIDDMASNIEALSKSKSNIERTCRTVEDQFSEIKAKDEQQTQLIHDLNMQKARLQTQNGE 1290
Query: 173 EAELIRNIQELL------KRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHH 226
+ + + L+ K+A+ Q + ++ E + + +++ D C
Sbjct: 1291 LSHRVEEKESLISQLTKSKQALTQQLEELKRQMEEETKAKNAMAHALQSSRHD--CDLLR 1348
Query: 227 SQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRD 286
Q E Q + + ++ + RTK+ D + + E L+ A L
Sbjct: 1349 EQYEEEQ-EAKAELQRALSKANSEVAQWRTKYETDAI--QRTEELEEAKK------KLAQ 1399
Query: 287 TSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEE 346
++ + N +C LE + +LQ + ++R++ ++ H A + K +
Sbjct: 1400 RLQEAEENTETAN----SKCASLEKTKQRLQGEVEDLMRDL-ERSHTACATLDK-KQRNF 1453
Query: 347 PLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDI 406
+A+ + L + + +AAQ S EL+K A E + Q E R K
Sbjct: 1454 DKVLAEWKQKLDESQAEL----EAAQKESRSLSTELFKMRNAYEEVVDQLETLRRENK-- 1507
Query: 407 HMSLEKDVTAMTNSV 421
+L+++++ +T +
Sbjct: 1508 --NLQEEISDLTEQI 1520
Score = 42.7 bits (99), Expect = 7e-04
Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 32/344 (9%)
Query: 89 TQQDSTCRVGERLQDTNSWKSELQREVEALAAE-TDLLLAQKQRLERALDAMEVPFSITT 147
T ++ R E L + + + EL+ ++ +L E DL L + E +DA E
Sbjct: 855 TMKEDFERTKEELARSEARRKELEEKMVSLLQEKNDLQLQVQSETENLMDAEE------- 907
Query: 148 DNMQCSQRHQHTNLLRDHVE--TELLKEAELIRNIQELLKRAIMQAVSQIXLNXEHMEIC 205
+C + LL V+ TE L+E E + + KR + S + + + +E+
Sbjct: 908 ---RCEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDKCSSLKRDIDDLELT 964
Query: 206 EMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCH 265
KVE +H +++ T +E + ++ + Q L
Sbjct: 965 ----LTKVEKE-------KHATENKVKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDD 1013
Query: 266 AQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLR 325
Q E D N + ++ L ++DL + + +LE A+ KL+ L
Sbjct: 1014 LQVEE-DKVNGLIKINAKLEQQTDDLEGSLEQEK----KLRADLERAKRKLEGDLKMSQE 1068
Query: 326 EITDQEHNVVALKEAIKDKEEPLHIAQTRL-XLLSHRPNMQLCRDAAQFRLVSEVEELYK 384
I D E++ ++E +K KE L Q ++ H Q Q R + E+EE +
Sbjct: 1069 SIMDLENDKQQIEEKLKKKEFELSQLQAKIDDEQVHSLQFQKKIKELQAR-IEELEEEIE 1127
Query: 385 SITALREKLLQAEQSL-RNLKDIHMSLEKDVTAMTNSVFIDRQK 427
+ LR K+ + L R L++I LE+ A + + +++++
Sbjct: 1128 AEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKR 1171
Score = 32.0 bits (71), Expect = 1.2
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 33/302 (10%)
Query: 67 ERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDL-- 124
E L+ ES+ L + + ++ D +V E+ ++ K QR EAL + D
Sbjct: 1552 EGSLEHEESKILRVQLELSQVKSELDR--KVIEKDEEIEQLKRNSQRAAEALQSVLDAEI 1609
Query: 125 -----LLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHT--NLLRD---HVETELLKEA 174
L K+++E L+ ME+ + M +Q+H T L+D H++ L
Sbjct: 1610 RSRNDALRLKKKMEGDLNEMEIQLGHSNRQMAETQKHLRTVQGQLKDSQLHLDDALRSNE 1669
Query: 175 ELIRNIQELLKR--AIMQAVSQIXLNXEHMEICE-------MDWSDKVEAYNLDKTCGRH 225
+L + + +R +++ + ++ + E E +D SD+V+ + T +
Sbjct: 1670 DLKEQLAIVERRNGLLLEELEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLIN 1729
Query: 226 HSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQ---RERLDSANLWVLVDC 282
+ E + S + E K D A+ +E+ SA+L +
Sbjct: 1730 TKKKLEADIAQCQAEVENSIQESRNAEEKAKKAITDAAMMAEELKKEQDTSAHL-ERMKK 1788
Query: 283 ILRDTSEDLGLQCD-AVNLAFGRRCEELEDARHKLQHHLHKMLREI-TDQEHNVVALKEA 340
L T +DL + D A LA ++++ KL++ + ++ E+ +Q+ ALK A
Sbjct: 1789 NLEQTVKDLQHRLDEAEQLALKGGKKQIQ----KLENRVRELENELDVEQKRGAEALKGA 1844
Query: 341 IK 342
K
Sbjct: 1845 HK 1846
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 45.4 bits (106), Expect = 1e-04
Identities = 85/385 (22%), Positives = 148/385 (38%), Gaps = 71/385 (18%)
Query: 68 RELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLA 127
R LQ A E + TQ+ + R+ L+ + K LQ+E+ + + LLA
Sbjct: 2675 RHLQRESQSAKALEELRASLETQRAQSSRLCVALKHEQTAKDNLQKELRIEHSRCEALLA 2734
Query: 128 QKQ----RLERALDA-----MEVPFSITTDNMQCSQRHQHTNLLRDHVETE--------L 170
Q++ L++ L A +E+ ++ + + Q Q T H +T+ L
Sbjct: 2735 QERSQLSELQKDLAAEKSRTLELSEALRHERLLTEQLSQRTQEACVHQDTQAHHALLQKL 2794
Query: 171 LKEAELIRNIQELLKRAIMQAV-SQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQS 229
+E + ++Q +L++ QA+ SQ L E + CE +K + L T H+Q
Sbjct: 2795 KEEKSRVVDLQAMLEKVQQQALHSQQQLEAEAQKHCEALRREKEVSATLKSTVEALHTQK 2854
Query: 230 TEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSE 289
E++ C +RER A L ++ E
Sbjct: 2855 RELR------------------------------CSLEREREKPAWLQAELEQSHPRLKE 2884
Query: 290 DLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQE----HNVVALKEAIKDKE 345
G + A A R+ + K Q K LRE+ Q H + L++ ++D E
Sbjct: 2885 QEGRKA-ARRSAEARQSPAAAEQWRKWQRDKEK-LRELELQRQRDLHKIKQLQQTVRDLE 2942
Query: 346 EPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSL----- 400
+ +RL L S R A + E + + A+R++LL A + L
Sbjct: 2943 SKDEVPGSRLHLGSAR--------RAAGSDADHLREQQRELEAMRQRLLSAARLLTSFTS 2994
Query: 401 ----RNLKDIHMSLEKDVTAMTNSV 421
R + D S EK V ++ +++
Sbjct: 2995 QAVDRTVNDWTSSNEKAVMSLLHTL 3019
Score = 30.8 bits (68), Expect = 2.6
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 19/219 (8%)
Query: 108 KSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRD--- 164
+++ Q+E+ AE + + K + ERAL +E + ++ + +H L D
Sbjct: 377 QNQFQKELAEQRAELEKIFQDKNQAERALRNLESHHQAAIEKLREDLQSEHGRCLEDLEF 436
Query: 165 -HVETELLKEAELIRNIQ---ELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDK 220
E+E K+ EL N+Q E LK + + ++ + + S+ E
Sbjct: 437 KFKESEKEKQLEL-ENLQASYEDLKAQSQEEIRRLWSQLDSARTSRQELSELHEQLLART 495
Query: 221 TCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLV 280
+ Q + + H + ++ K Q++L Q +RL A L+
Sbjct: 496 SRVEDLEQLKQREKTQHESELEQLRIYFEKKLRDAEKTYQEDLTLLQ-QRLQGAREDALL 554
Query: 281 DCILRDTSEDLGLQCDAV--NLAFGRR--CEELEDARHK 315
D S ++GL C + GR+ +ELE RHK
Sbjct: 555 D------SVEVGLSCVGLEEKPEKGRKDHVDELEPERHK 587
Score = 30.4 bits (67), Expect = 3.4
Identities = 87/400 (21%), Positives = 148/400 (37%), Gaps = 37/400 (9%)
Query: 66 SERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAE---- 121
SE++ HE ++ A AQP Q+ + +LQ N +L+ +V +L+ E
Sbjct: 1060 SEKKTALHEKEETLRLQSAQAQPFHQEEKESLSLQLQKKNHQVQQLKDQVLSLSHEIEEC 1119
Query: 122 -TDLLLAQKQRLERALDAMEVPFSITTD-NMQCSQRHQHTNLLRDHVET--ELLKEAELI 177
++L + Q++R + + + D N+ S+R + LR + E L+ A +
Sbjct: 1120 RSELEVLQQRRERENREGANLLSMLKADVNLSHSERGALQDALRRLLGLFGETLRAAVTL 1179
Query: 178 RN-IQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHP 236
R+ I E + + A + + L+ E WSD V LD+T S+ +
Sbjct: 1180 RSRIGERVGLCLDDAGAGLALST--APALEETWSD-VALPELDRTLSECAEMSSVAEISS 1236
Query: 237 HSTTFQERGPRSASTPETRTKFTQDNLCHA----QRERLDSANLWVLVDCILRDTSEDLG 292
H P S E + +L A LDS+ I ++
Sbjct: 1237 HMRESFLMSPESVRECEQPIRRVFQSLSLAVDGLMEMALDSSRQLEEARQIHSRFEKEFS 1296
Query: 293 LQCDAVNLAFGRRCEELE------DARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEE 346
+ + + E LE A+ +L LHK + + LKE + KE+
Sbjct: 1297 FKNEETAQVVRKHQELLECLKEESAAKAELALELHKTQGTLEGFKVETADLKEVLAGKED 1356
Query: 347 PLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITA------LREKLL--QAEQ 398
H L L R Q ++ A R E L+ A RE L + E
Sbjct: 1357 SEHRLVLELESL-RRQLQQAAQEQAALR--EECTRLWSRGEATATDAEAREAALRKEVED 1413
Query: 399 SLRNLKDIHMSLEKDVTAMTNSVFI----DRQKCMAHRTC 434
+ + EKD +A+ + + I ++ HR C
Sbjct: 1414 LTKEQSETRKQAEKDRSALLSQMKILESELEEQLSQHRGC 1453
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 45.1 bits (105), Expect = 1e-04
Identities = 83/423 (19%), Positives = 177/423 (41%), Gaps = 68/423 (16%)
Query: 50 QNCYARYRQAFANCNQSERELQG--HESQQLAAETQALAQPTQQ---------------- 91
Q Y + R AN ++E++LQ E +++ + + A+ QQ
Sbjct: 1644 QELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELEEENDRLRAEV 1703
Query: 92 ----DSTCRVGERLQDTN-SWKSELQR---EVEALAAETDLLLAQKQRLERALDAM--EV 141
D+ E L +N S K EL+R E E L+ + L+++K L + + ++
Sbjct: 1704 HPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMSEKDSLSEEVQDLKHQI 1763
Query: 142 PFSITTD-NMQCSQRHQH-TNLLRDHVET---ELLKEAELIRNIQELLKRAIMQAVS--- 193
+++ N++ +++H + TN+ + ++ E ++ L + + ++ A S
Sbjct: 1764 EGNVSKQANLEATEKHDNQTNVTEEGTQSIPGETEEQDSLSMSTRPTCSESVPSAKSANP 1823
Query: 194 --------QIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERG 245
+N +I ++ +++ +K + SQ+ E + +T +
Sbjct: 1824 AVSKDFSSHDEINNYLQQIDQL--KERIAGLEEEKQKNKEFSQTLE---NEKNTLLSQIS 1878
Query: 246 PRSASTPETRTKFTQDNLCHAQ-RERLDSAN-LWVLVDCILRDTSEDLGLQCDAVNLAFG 303
+ + + T+ NL + Q +E L L + D E L Q +N + G
Sbjct: 1879 TKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIG 1938
Query: 304 RRCEELEDARHKLQ------HHLHKMLREITDQEHNVVALKEAI-----KDKEEPLHIAQ 352
C+++ DA+ K + +L K + E+ +++ +V K + K+ E + AQ
Sbjct: 1939 NYCQDVTDAQIKNELLESEMKNLKKCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQ 1998
Query: 353 TRLXLLSHRPNMQ-LCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLE 411
SH +Q L ++ Q EV++L K +EK+ E++++ L+ + +
Sbjct: 1999 KEPGNKSHAKELQELLKEKQQ-----EVKQLQKDCIRYQEKISALERTVKALEFVQTESQ 2053
Query: 412 KDV 414
KD+
Sbjct: 2054 KDL 2056
Score = 36.6 bits (83), Expect = 0.047
Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 56/341 (16%)
Query: 76 QQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERA 135
Q+ E Q ++ ++ E+L+++ +L+R AL E KQ L +
Sbjct: 2551 QKQLLEVQLQQNKELENKYAKLEEKLKESEEANEDLRRSFNALQEE-------KQDLSKE 2603
Query: 136 LDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAVSQI 195
+++++V S T + Q L ++ +KE E+ R L + +I
Sbjct: 2604 IESLKVSISQLTRQVTALQEEGTLGLYHAQLK---VKEEEVHR-----LSALFSSSQKRI 2655
Query: 196 XLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETR 255
E + + + + KV G + + H H A
Sbjct: 2656 AELEEELVCVQKEAAKKV---------GEIEDKLKKELKHLH---------HDAGIMRNE 2697
Query: 256 TKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHK 315
T+ ++ + R+ ++ ++V T E+ GL + FGR L+++R
Sbjct: 2698 TETAEERVAELARDLVEMEQKLLMV------TKENKGLTAQIQS--FGRSMSSLQNSRDH 2749
Query: 316 LQHHLHKMLREITDQEHNVVALKE-AIKDKEEPLHIAQTRLXL-------LSHRPNMQ-- 365
L ++ R+ + LKE + ++E +++T + LSH +
Sbjct: 2750 ANEELDELKRKYDASLKELAQLKEQGLLNRERDALLSETAFSMNSTEENSLSHLEKLNQQ 2809
Query: 366 -LCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKD 405
L +D L S++E+ Y + + +A SL+N +D
Sbjct: 2810 LLSKDEQLLHLSSQLEDSYNQV----QSFSKAMASLQNERD 2846
Score = 32.7 bits (73), Expect = 0.68
Identities = 83/376 (22%), Positives = 151/376 (40%), Gaps = 61/376 (16%)
Query: 74 ESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALA-----AETDLLLAQ 128
E Q+L E Q + Q+D R E++ S L+R V+AL ++ DL +
Sbjct: 2009 ELQELLKEKQQEVKQLQKDCI-RYQEKI-------SALERTVKALEFVQTESQKDLEIT- 2059
Query: 129 KQRLERALD------AMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEA--ELIRNI 180
K+ L +A++ A F + D+ Q + L+ E + KE+ ++
Sbjct: 2060 KENLAQAVEHRKKAQAELASFKVLLDDTQSEAARVLADNLKLKKELQSNKESVKSQMKQK 2119
Query: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT 240
E L+R + QA + ++M+ +K++A +K +V +
Sbjct: 2120 DEDLERRLEQAEEKHLKEKKNMQ-------EKLDALRREKVHLEETIGEIQVTLNKKDKE 2172
Query: 241 FQERGPRSASTPETRTKFTQD-NLCHAQRER-LDSANLWVL-VDCILRDTSEDLGLQCDA 297
Q+ ST FT+ + R+R +D A W ++ E++ L+ D
Sbjct: 2173 VQQLQENLDSTVTQLAAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIRLKED- 2231
Query: 298 VNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXL 357
C L+D ++ H+ ++ I+ EH+ K+ + K AQT + L
Sbjct: 2232 -------NCSVLKDQLRQMSIHMEELKINISRLEHD----KQIWESK------AQTEVQL 2274
Query: 358 LSHRPNMQLCR--DAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLK----DIHMSLE 411
++C L+S++EE + + +L + E L++LK D+ SLE
Sbjct: 2275 -----QQKVCDTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDLSNSLE 2329
Query: 412 KDVTAMTNSVFIDRQK 427
K N I RQ+
Sbjct: 2330 KCKEQKGNLEGIIRQQ 2345
Score = 30.0 bits (66), Expect = 4.4
Identities = 68/355 (19%), Positives = 136/355 (38%), Gaps = 31/355 (8%)
Query: 66 SERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLL 125
S + +S L ET ++ P S WK EL+ ++ AL E + L
Sbjct: 1128 SNTDASDGDSVALVKETVVISPPCTGSS-----------EHWKPELEEKILALEKEKEQL 1176
Query: 126 LAQKQRLERALDAMEVPFSITTD-----NMQCSQRHQHTNLLRDHVETELLKEAELIRNI 180
+++L+ AL + + + + Q+ N L++ + E KE E I +
Sbjct: 1177 ---QKKLQEALTSRKAILKKAQEKERHLREELKQQKDDYNRLQEQFD-EQSKENENIGDQ 1232
Query: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQST-EVQAHPHST 239
L+ + +++ + + E C S L K +HH+Q E P
Sbjct: 1233 LRQLQIQVRESIDGKLPSTDQQESCS---STPGLEEPLFKATEQHHTQPVLESNLCPDWP 1289
Query: 240 TFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVN 299
+ E SA T + L + E+++ L SE++ + +N
Sbjct: 1290 SHSE--DASALQGGTSVAQIKAQLKEIEAEKVELELKVSSTTSELTKKSEEVFQLQEQIN 1347
Query: 300 LAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVA---LKEAIKDKEEPLHIAQTRLX 356
G E L+ H+ + H + +++ + + L+E +E + +
Sbjct: 1348 KQ-GLEIESLKTVSHEAEVHAESLQQKLESSQLQIAGLEHLRELQPKLDELQKLISKKEE 1406
Query: 357 LLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKL-LQAEQSLRNLKDIHMSL 410
+S+ ++AA ++ +E+ E I AL +L +QA++ +K + + L
Sbjct: 1407 DVSYLSGQLSEKEAALTKIQTEIIEQEDLIKALHTQLEMQAKEHDERIKQLQVEL 1461
Score = 29.3 bits (64), Expect = 7.5
Identities = 74/359 (20%), Positives = 125/359 (34%), Gaps = 82/359 (22%)
Query: 67 ERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLL 126
E +++ HE + L TQA + T+ RV +R +L+ E+L ++
Sbjct: 227 ETQVRLHEDELLQLVTQADVE-TEMQQKLRVLQR---------KLEEHEESLVGRAQVV- 275
Query: 127 AQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKR 186
L++ L A E I + +Q Q N LR+ VETE
Sbjct: 276 ---DLLQQELTAAEQRNQILSQQLQ--QMEAEHNTLRNTVETE----------------- 313
Query: 187 AIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGP 246
+ S+I L +E+ E K+ +NL + + H F++ G
Sbjct: 314 ---REESKILLEKMELEVAER----KLSFHNLQE------------EMHHLLEQFEQAGQ 354
Query: 247 RSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRC 306
A + Q + A+ E S L L+ T ++L CDA
Sbjct: 355 AQAELESRYSALEQKH--KAEMEEKTSHIL------SLQKTGQELQSACDA--------- 397
Query: 307 EELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQ- 365
L+D KL L + + L++ ++ K + + RL L H Q
Sbjct: 398 --LKDQNSKL---LQDKNEQAVQSAQTIQQLEDQLQQKSKEISQFLNRLPLQQHETASQT 452
Query: 366 ----LCRDAAQFRLVSEVEELYKSITALREK---LLQAEQSLRNLKDIHMSLEKDVTAM 417
+ + Q + L K + L + LL + L LK + L +T +
Sbjct: 453 SFPDVYNEGTQAVTEENIASLQKRVVELENEKGALLLSSIELEELKAENEKLSSQITLL 511
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 43.9 bits (102), Expect = 3e-04
Identities = 85/380 (22%), Positives = 147/380 (38%), Gaps = 43/380 (11%)
Query: 57 RQAFANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERL-------QDTNSWKS 109
R+ A + REL+ E+ T A + Q + +GE++ Q KS
Sbjct: 1214 RKREAELGRLRRELE--EAALRHEATVAALRRKQAEGAAELGEQVDSLQRVRQKLEKEKS 1271
Query: 110 ELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRH-QHTNLLRDHVET 168
EL+ EV+ LAA + L K E+ E S ++ QR + R ++T
Sbjct: 1272 ELRMEVDDLAANVETLTRAKASAEKLCRTYEDQLSEAKIKVEELQRQLADASTQRGRLQT 1331
Query: 169 E------LLKEAELIRNIQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTC 222
E LL+E E + + K Q++ ++ E + + V+A D
Sbjct: 1332 ESGELSRLLEEKECLISQLSRGKALAAQSLEELRRQLEEESKAKSALAHAVQALRHDCDL 1391
Query: 223 GR-HHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVD 281
R H + E QA +A + R+K+ D + + E L+ A
Sbjct: 1392 LREQHEEEAEAQAELQRLL----SKANAEVAQWRSKYEADAI--QRTEELEEAK----KK 1441
Query: 282 CILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAI 341
LR + G++ A +C LE A+ +LQ + E+ AL
Sbjct: 1442 LALRLQEAEEGVE------AANAKCSSLEKAKLRLQTESEDVTLELERATSAAAAL---- 1491
Query: 342 KDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLR 401
DK++ H+ + MQ +AAQ E L + LR +A ++L
Sbjct: 1492 -DKKQ-RHLERALEERRRQEEEMQRELEAAQ----RESRGLGTELFRLRHGHEEALEALE 1545
Query: 402 NLKDIHMSLEKDVTAMTNSV 421
LK + +L+++++ +T+ V
Sbjct: 1546 TLKRENKNLQEEISDLTDQV 1565
Score = 33.1 bits (74), Expect = 0.52
Identities = 73/380 (19%), Positives = 143/380 (37%), Gaps = 47/380 (12%)
Query: 72 GHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQR 131
GHE A ET Q+ + +++ + EL++ +AL E + A +
Sbjct: 1536 GHEEALEALETLKRENKNLQEEISDLTDQVSLSGKSIQELEKTKKALEGEKSEIQAALEE 1595
Query: 132 LERALDAMEV----------PFSITTDNMQCSQRHQHTNLLRDHVETELLKEAEL----- 176
E AL+ E D + + NL R+H +A L
Sbjct: 1596 AEGALELEETKTLRIQLELSQVKAEVDRKLAEKDEECANLRRNHQRAVESLQASLDAETR 1655
Query: 177 IRNIQELLKRAIMQAVSQIXLNXEH--MEICEMDWSDK-VEAYNLDKTCGRHHSQSTEVQ 233
RN LK+ + ++ + L H + E + + ++A ++ GR Q +
Sbjct: 1656 ARNEALRLKKKMEGDLNDLELQLGHATRQATEAQAATRLMQAQLKEEQAGRDEEQRLAAE 1715
Query: 234 AHPHSTTFQERGP-RSASTPETRTKFTQDNLCH--AQRERLDSANLWVLVDCILRDTSED 290
H + + R +A E R Q A++E L++ L+ S++
Sbjct: 1716 LHEQAQALERRASLLAAELEELRAALEQGERSRRLAEQELLEATERLNLLH------SQN 1769
Query: 291 LGL--QCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPL 348
GL Q + + E+E+A + + K + ITD + +E K+++
Sbjct: 1770 TGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAKKAITDA---AMMAEELKKEQDTSA 1826
Query: 349 HIAQTRLXLLSHRPNMQLCRDAAQ-----------FRLVSEVEELYKSITALREKLLQAE 397
H+ + + L +Q + A+ +L ++V EL + A ++K +A
Sbjct: 1827 HLERMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEAL 1886
Query: 398 QSL----RNLKDIHMSLEKD 413
+ + R +K++ E+D
Sbjct: 1887 KGVRKHERRVKELAYQAEED 1906
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 131 RLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLK 172
+L A D M VPFSI T+N+Q ++ H L+ D+VETELLK
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLK 344
Score = 38.9 bits (89), Expect = 0.010
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 374 RLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEK 412
RL +EVE L+ S+ LREKLL+ EQSL NL+ + EK
Sbjct: 446 RLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 131 RLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLK 172
+L A D M VPFSI T+N+Q ++ H L+ D+VETELLK
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLK 344
Score = 38.9 bits (89), Expect = 0.010
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 374 RLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEK 412
RL +EVE L+ S+ LREKLL+ EQSL NL+ + EK
Sbjct: 446 RLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 131 RLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLK 172
+L A D M VPFSI T+N+Q ++ H L+ D+VETELLK
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLK 344
Score = 38.9 bits (89), Expect = 0.010
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 374 RLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEK 412
RL +EVE L+ S+ LREKLL+ EQSL NL+ + EK
Sbjct: 446 RLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
>gi|92091575 coiled-coil domain containing 57 [Homo sapiens]
Length = 915
Score = 41.2 bits (95), Expect = 0.002
Identities = 82/393 (20%), Positives = 154/393 (39%), Gaps = 40/393 (10%)
Query: 54 ARYRQAFANCNQSERELQGHESQQLAAETQALA-QPTQQDSTCRVGERLQDTNSWKSELQ 112
A+ RQA A + ELQ + QQLA + L + D + + + K L+
Sbjct: 100 AKLRQALAREARKVEELQ--QQQQLAFQEHRLELERVHSDKNGEIDHHREQYENLKWTLE 157
Query: 113 REVEALAAETDLLLAQKQRL----ERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVET 168
R++E L E L Q+Q L E + E F + DNM + + + H E
Sbjct: 158 RKLEELDGE---LALQRQELLLEFESKMRKREHEFRLQADNMSNTALSRELKVKLLHKEL 214
Query: 169 ELLKE--AELIRNIQEL------LKRAIMQAVSQIXLNXEHMEICEM-DWSDKVEAYNL- 218
E LKE A+ ++Q L+R + ++ + E M + D DK+ + L
Sbjct: 215 EALKEAGAKAAESLQRAEATNAELERKLQSRAGELQ-DLEAMSRARVKDLEDKLHSVQLT 273
Query: 219 ----DKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKF---------TQDNLCH 265
++T R H + + + +G E +T+ + L
Sbjct: 274 RKKEEETFKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRR 333
Query: 266 AQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLR 325
A+ + D+A LR+ + + DA + + LQ K+
Sbjct: 334 AEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKA 393
Query: 326 EITDQEHNVVALKEAIK---DKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEEL 382
++ + ++ K+ + ++E L Q +L L R + RD Q + + ++ L
Sbjct: 394 QVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIERDQIQ-KSEALIQGL 452
Query: 383 YKSITALREKLLQAEQSLRNLKDI--HMSLEKD 413
+ + + KL + EQ+L+ + + ++LE+D
Sbjct: 453 SMAKSQVAAKLQETEQALQEQEVVLKAVTLERD 485
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 40.4 bits (93), Expect = 0.003
Identities = 82/392 (20%), Positives = 158/392 (40%), Gaps = 62/392 (15%)
Query: 45 LEVWFQNCYARYRQAFANCNQSERELQGHESQ-QLAAETQALAQPTQQDSTCRVGERLQD 103
LE Q + + + +Q E+E+ + Q Q A E L + + Q +L +
Sbjct: 1755 LEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQS-------QLDE 1807
Query: 104 TNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLR 163
++ +E+EAL E Q++R++ DA++ ++ +M +RH L+
Sbjct: 1808 AQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQ--GALEQAHMTLKERHGE---LQ 1862
Query: 164 DH------VETELLKEAELIRNIQELL----------KRAIMQAVSQIXLNXEHMEICEM 207
DH +E EL E ++ ++E+L ++A++ Q E + E+
Sbjct: 1863 DHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQC---AEQAQEHEV 1919
Query: 208 DWSDKVEAYNLDKTCGRHHSQSTE-VQAHPHSTTFQERGPRSASTPETRTKFTQDNL--C 264
+ +++ + + Q E ++A S+ QE R+ R + Q+ L
Sbjct: 1920 ETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARA------RAEALQEALGKA 1973
Query: 265 HAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKML 324
HA + + L +L +A + + +L+ L
Sbjct: 1974 HAALQGKEQHLL----------EQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQE 2023
Query: 325 REITDQ----EHNVVALKEAIKDKEEPLHIAQTRLXLLSH------RPNM-QLCRDAAQF 373
EI DQ + +V L++A+ ++E L Q R LL + NM Q ++ Q
Sbjct: 2024 GEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQE 2083
Query: 374 RLVSEVEELYKSITALREKLLQAEQSLRNLKD 405
R E+ L++S+ L+ L Q EQ + L++
Sbjct: 2084 REEEEIRGLHQSVRELQLTLAQKEQEILELRE 2115
Score = 40.0 bits (92), Expect = 0.004
Identities = 90/410 (21%), Positives = 162/410 (39%), Gaps = 75/410 (18%)
Query: 57 RQAFANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKS-ELQREV 115
RQ A C ++ LQ + Q E +AL Q Q+ GER DT + ++ +LQ EV
Sbjct: 406 RQQLAGCQEAVNLLQ-QQHDQWEEEGKALRQRLQK----LTGER--DTLAGQTVDLQGEV 458
Query: 116 EALAAETDLLLAQKQRLERALDAME----------VPFSITTDNMQCSQRHQHTNLLRDH 165
++L+ E +LL ++ L + L+ +E V + D+ Q + Q L H
Sbjct: 459 DSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEEL---H 515
Query: 166 VETELLKEAELIRNIQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRH 225
+ ++E E ++ + L+ +++S++ E +E S +E L
Sbjct: 516 L---AVRERERLQEMLMGLEAKQSESLSELITLREALE------SSHLEGELL------- 559
Query: 226 HSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILR 285
+ TEV A + E+ S+ E K +L A +L + N + +D +
Sbjct: 560 RQEQTEVTA---ALARAEQSIAELSSSENTLKTEVADL-RAAAVKLSALNEALALDKV-- 613
Query: 286 DTSEDLGLQCDAVNLAFGRRCEELEDARHKLQ-----------------HHLHKMLR--- 325
++ L LQ + N + R E E AR+ LQ HL L+
Sbjct: 614 GLNQQL-LQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAE 672
Query: 326 --------EITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVS 377
++ D + +++ + + A T+L L Q + R V
Sbjct: 673 EAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQ---EEVLARAVQ 729
Query: 378 EVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQK 427
E E L + AL +L E+ ++L + L + +S+F +Q+
Sbjct: 730 EKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQ 779
Score = 36.2 bits (82), Expect = 0.062
Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 36/324 (11%)
Query: 91 QDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAME---VPFSITT 147
+D ++ ERL DT + KS++ E++ L + +K + E +++E + T
Sbjct: 1263 RDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETM 1322
Query: 148 DNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQ-ELLKRAIMQAVSQIXLNXEHMEICE 206
++Q R + E ELL+ A+ Q E L+ A+++A +Q I E
Sbjct: 1323 ASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQ----ASAAGILE 1378
Query: 207 MDWSDKVEAYNL---DKTCGRHHSQSTEVQAH---PHSTTFQERGPRSAST-----PETR 255
D A L + R +Q+ + Q QE T E
Sbjct: 1379 EDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVE 1438
Query: 256 TKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHK 315
T Q QRE +A + +D L+ ++++ LQ + + +ELE R
Sbjct: 1439 TLRGQIQELEKQREMQKAALELLSLD--LKKRNQEVDLQQEQI--------QELEKCRSV 1488
Query: 316 LQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRL 375
L+H + + ++E + +E I++ E+ +T+ +L H+ +D
Sbjct: 1489 LEH----LPMAVQEREQKLTVQREQIRELEKD---RETQRNVLEHQLLELEKKDQMIESQ 1541
Query: 376 VSEVEELYKSITALREKLLQAEQS 399
+V++L K + L L+ E++
Sbjct: 1542 RGQVQDLKKQLVTLECLALELEEN 1565
Score = 33.9 bits (76), Expect = 0.31
Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 22/285 (7%)
Query: 64 NQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETD 123
+Q+E+E ++QLA Q +Q E Q W+ E + LA +
Sbjct: 820 SQAEQERDA-AARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALE 878
Query: 124 LLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQEL 183
L +K LE L + + +Q + + T + +L E E + ++ L
Sbjct: 879 SLEREKMELEMRLKEQQTEM----EAIQAQREEERTQAESALCQMQLETEKERVSLLETL 934
Query: 184 LKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQE 243
L Q ++ + +E D KV+ +T G +Q E Q Q
Sbjct: 935 L-----QTQKELADASQQLERLRQDM--KVQKLKEQETTGILQTQLQEAQRELKEAARQH 987
Query: 244 RGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFG 303
R +A E+ + Q E L S + +D S+ L Q L
Sbjct: 988 RDDLAALQEESSSLLQDKMDLQKQVEDLKS-------QLVAQDDSQRLVEQEVQEKL--- 1037
Query: 304 RRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPL 348
R +E + +L+ + + ++E ++ L+EA +++ L
Sbjct: 1038 RETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQEL 1082
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapiens]
Length = 1478
Score = 40.4 bits (93), Expect = 0.003
Identities = 72/339 (21%), Positives = 128/339 (37%), Gaps = 28/339 (8%)
Query: 58 QAFANCNQSERELQ---GHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQR- 113
Q C++ E LQ E+QQ E +AL + Q + C E + + +L R
Sbjct: 843 QELLQCSEREGALQEERADEAQQREEELRALQEELSQ-AKCSSEEAQLEHAELQEQLHRA 901
Query: 114 --EVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELL 171
+ L + L +K+R+E AL + + + E E L
Sbjct: 902 NTDTAELGIQVCALTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKESL 961
Query: 172 KE--------AELIRNIQELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCG 223
+E A + +Q L +A +A S + + + S ++ Y
Sbjct: 962 QEKLKAAKAAAGSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQ-----S 1016
Query: 224 RHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCI 283
R + E ++ Q R ++A + K TQ ++ ++ S +L +
Sbjct: 1017 RLKNAGEECKSLRGQLEEQGRQLQAAEEAVEKLKATQADM--GEKLSCTSNHLAECQAAM 1074
Query: 284 LRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKD 343
LR E L+ D R +ELE A K+Q + +K+ +E+T++E N + + D
Sbjct: 1075 LRKDKEGAALRED-----LERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDD 1129
Query: 344 KEEPLHIAQTRL-XLLSHRPNMQLCRDAAQFRLVSEVEE 381
+ RL LL + + DA +F+ EE
Sbjct: 1130 LNRTKKYLEERLIELLRDKDALWQKSDALEFQQKLSAEE 1168
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 40.0 bits (92), Expect = 0.004
Identities = 70/368 (19%), Positives = 132/368 (35%), Gaps = 54/368 (14%)
Query: 73 HESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQRL 132
H + A+ L + T ++ R+ + Q N+ +++ +E L ++ A ++
Sbjct: 271 HAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDH 330
Query: 133 ERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAV 192
ER E + Q+ + ++LR+ + N + K +Q V
Sbjct: 331 ERTRRLAEAEMHVHHLESLLEQKEKENSMLREEMHRRF-------ENAPDSAKTKALQTV 383
Query: 193 SQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTP 252
I + + E D E + K+ G ST +E +
Sbjct: 384 --IEMKDSKISSMERGLRDLEEEIQMLKSNGAL------------STEEREEEMKQMEVY 429
Query: 253 ETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDA 312
+ +KF ++ + + E W L+ + L + V R+ EL
Sbjct: 430 RSHSKFMKNKVEQLKEELSSKEAQWEE----LKKKAAGLQAEIGQVKQELSRKDTELL-- 483
Query: 313 RHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHR---PNMQLCRD 369
LQ L + + +D + ++ LKE++ KE+ I QT + L R L +
Sbjct: 484 --ALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKK 541
Query: 370 AAQFRLVSE----------------------VEELYKSITALREKLLQAEQSLRNLKDIH 407
Q + ++E V L K I L+E+L E+ + +LK+
Sbjct: 542 TKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERV 601
Query: 408 MSLEKDVT 415
SL+ D T
Sbjct: 602 KSLQADTT 609
Score = 36.6 bits (83), Expect = 0.047
Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 57/335 (17%)
Query: 99 ERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQH 158
E+L+D S L+ V++L A+T LE AL E + +R +
Sbjct: 585 EQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQ 644
Query: 159 TNL------LRDHVETELLKEAELIRNIQEL--LKRAIMQAVSQIXLNXEHMEICEMDWS 210
+ L+D E L + +L L LK S ++ E+
Sbjct: 645 EEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALE 704
Query: 211 D-KVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRE 269
K E ++ + H + E +A P + D + H +RE
Sbjct: 705 QKKEECLKMESQLKKAHEAALEARASPEMS---------------------DRIQHLERE 743
Query: 270 RLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITD 329
I R E Q + L +E+E+ ++ + ++ R++ D
Sbjct: 744 -------------ITRYKDESSKAQAEVDRLL--EILKEVENEKNDKDKKIAELERQVKD 788
Query: 330 QEHNVVAL--KEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFR--LVSEVEELYK- 384
Q V L KE ++ K+ + + R + + Q +D+ + + + E+EE +
Sbjct: 789 QNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRE 848
Query: 385 --SITALREKLLQAEQSLR-----NLKDIHMSLEK 412
ITA RE +L E+S R ++++ M++EK
Sbjct: 849 SVQITAEREMVLAQEESARTNAEKQVEELLMAMEK 883
Score = 31.6 bits (70), Expect = 1.5
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 284 LRDTSEDLGLQCDAVNLAFGRRCEELEDARHK----LQHHLHKMLREITDQEHNVVALKE 339
++D +E+ G Q ++ +++ D + + LQ + + ++ D+E + +LKE
Sbjct: 545 IQDMAEEKGTQAGEIH-----DLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKE 599
Query: 340 AIKDKEEPLHIAQTRLXLLSHR--------PNMQLCRDAAQFRLVSEVEELYKSITALRE 391
+K + T L L ++ RD + E++ K + L+E
Sbjct: 600 RVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKE 659
Query: 392 K-------LLQAEQSLRNLKDIHMS------LEKDVTAMTNSVFIDRQK 427
K L + E SL +LK+ H S L+KD T + ++++K
Sbjct: 660 KVSLLQGDLSEKEASLLDLKE-HASSLASSGLKKDSRLKTLEIALEQKK 707
Score = 30.4 bits (67), Expect = 3.4
Identities = 36/185 (19%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 91 QDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQ--------RLERALDAME-V 141
QDS + +R+++ E RE + AE +++LAQ++ ++E L AME V
Sbjct: 829 QDSLRKKDDRIEELE----EALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKV 884
Query: 142 PFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAVSQIXLNXEH 201
+ + + S Q H+ + + + + E+ + A++ A+S+ N
Sbjct: 885 KQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIAL 944
Query: 202 MEICEMDWSDKVEAYNLDKTCGR---HHSQSTEVQAHPHSTTFQERGPRSASTPETRTKF 258
+E+ + E L + R Q T+ + + +++ +S+ + +T K
Sbjct: 945 LELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQTNHKP 1004
Query: 259 TQDNL 263
+ D +
Sbjct: 1005 SPDQI 1009
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 39.7 bits (91), Expect = 0.006
Identities = 77/377 (20%), Positives = 144/377 (38%), Gaps = 64/377 (16%)
Query: 67 ERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLL 126
+ E G Q+L A T+ L++ Q+ + D + ELQR L + D ++
Sbjct: 191 KEESLGKMEQELEARTRELSRT--QEELMNSNQMSSDLSQKLEELQRHYSTLEEQRDHVI 248
Query: 127 AQK----------QRLERALDAMEVPFSITTDNMQCS------------------QRHQH 158
A K ++ E+ L A+ SI + ++
Sbjct: 249 ASKTGAESKITALEQKEQELQALIQQLSIDLQKVTAETQEKEDVITHLQEKVASLEKRLE 308
Query: 159 TNLLRDHVETELLKEAELI-RNIQELLKRAIMQAVSQI-XLNXEHMEICEMDWSDKVEAY 216
NL + ELLKE L +N+++ ++ + SQ +N + E++ + +
Sbjct: 309 QNLSGEEHVQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEE 368
Query: 217 NLDKTCGRHHSQSTEVQ----AHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLD 272
L ++ G +Q T++Q A+ S+ Q++ RT+ + + +R R
Sbjct: 369 QLQQSKGIVAAQETQIQELAAANQESSHVQQQALALEQQFLERTQALEAQIVALERTRAA 428
Query: 273 SANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEH 332
+ T+E Q + N A E E + Q L K+ E + +E
Sbjct: 429 D-----------QTTAEQGMRQLEQENAALKECRNEYERSLQNHQFELKKLKEEWSQREI 477
Query: 333 NVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREK 392
VA+ +A+++ + R Q + AA L + ++E +++ E
Sbjct: 478 VSVAMAQALEE-------------VRKQREEFQ--QQAA--NLTAIIDEKEQNLREKTEV 520
Query: 393 LLQAEQSLRNLKDIHMS 409
LLQ EQ + L+ H S
Sbjct: 521 LLQKEQEILQLERGHNS 537
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 39.3 bits (90), Expect = 0.007
Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 49/329 (14%)
Query: 112 QREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELL 171
Q E + L + D + ++Q L+ ++A++ T + + L++H+ ++
Sbjct: 336 QAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTA---------LQEHLLSKSG 386
Query: 172 KEAELIRNIQELLKRAIMQ-----AVSQIXLNXEHMEIC-EMDWSDKVEAYNLDKTCGRH 225
+ I E K+ I++ AV + L+ E+ E D+SD +
Sbjct: 387 GDCTFIHQFIECQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTL------------ 434
Query: 226 HSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILR 285
S + TT + + + P + +D+L AQ E + ++
Sbjct: 435 ---SPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSE--------IEAKQEIQ 483
Query: 286 DTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKE 345
++L ++ + ++C EL+ + + + E T Q + A + +
Sbjct: 484 HLRKEL-IEAQELARTSKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHIDT 542
Query: 346 EPLH------IAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQS 399
E L I TR LLS R + L AA ++ SE + I +L+E+L +
Sbjct: 543 ENLREEKDSEITSTRDELLSARDEILLLHQAAA-KVASERDT---DIASLQEELKKVRAE 598
Query: 400 LRNLKDIHMSLEKDVTAMTNSVFIDRQKC 428
L + EK++T++ NS + Q+C
Sbjct: 599 LERWRKAASEYEKEITSLQNSFQLRCQQC 627
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 38.9 bits (89), Expect = 0.010
Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 59/365 (16%)
Query: 85 LAQPTQQDSTCRVGERL--QDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVP 142
L Q QQDS+ R GE + T L E E A E LL + +E ++ +
Sbjct: 242 LNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQT 301
Query: 143 FSITTDNMQCSQRHQHTNLL------RDHVETELLKEAEL-IRNIQELLKRAIMQAVSQI 195
+ ++++ + L DH T L EAE+ + +++ LL++ + + +
Sbjct: 302 LNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQK--EKENSM 359
Query: 196 XLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETR 255
H S K +A T ++ + ERG R E
Sbjct: 360 LREEMHRRFENAPDSAKTKALQ------------TVIEMKDSKISSMERGLRDL---EEE 404
Query: 256 TKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHK 315
+ + N + ER + + R S+ + + V R+ EL
Sbjct: 405 IQMLKSNGALSTEEREEEMKQME----VYRSHSKFMKNKIGQVKQELSRKDTELL----A 456
Query: 316 LQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHR---PNMQLCRDAAQ 372
LQ L + + +D + ++ LKE++ KE+ I QT + L R L + Q
Sbjct: 457 LQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQ 516
Query: 373 FRLVSE----------------------VEELYKSITALREKLLQAEQSLRNLKDIHMSL 410
+ ++E V L K I L+E+L E+ + +LK+ SL
Sbjct: 517 IQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSL 576
Query: 411 EKDVT 415
+ D T
Sbjct: 577 QADTT 581
Score = 36.6 bits (83), Expect = 0.047
Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 57/335 (17%)
Query: 99 ERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQH 158
E+L+D S L+ V++L A+T LE AL E + +R +
Sbjct: 557 EQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQ 616
Query: 159 TNL------LRDHVETELLKEAELIRNIQEL--LKRAIMQAVSQIXLNXEHMEICEMDWS 210
+ L+D E L + +L L LK S ++ E+
Sbjct: 617 EEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALE 676
Query: 211 D-KVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRE 269
K E ++ + H + E +A P + D + H +RE
Sbjct: 677 QKKEECLKMESQLKKAHEAALEARASPEMS---------------------DRIQHLERE 715
Query: 270 RLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITD 329
I R E Q + L +E+E+ ++ + ++ R++ D
Sbjct: 716 -------------ITRYKDESSKAQAEVDRLL--EILKEVENEKNDKDKKIAELERQVKD 760
Query: 330 QEHNVVAL--KEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFR--LVSEVEELYK- 384
Q V L KE ++ K+ + + R + + Q +D+ + + + E+EE +
Sbjct: 761 QNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRE 820
Query: 385 --SITALREKLLQAEQSLR-----NLKDIHMSLEK 412
ITA RE +L E+S R ++++ M++EK
Sbjct: 821 SVQITAEREMVLAQEESARTNAEKQVEELLMAMEK 855
Score = 31.6 bits (70), Expect = 1.5
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 284 LRDTSEDLGLQCDAVNLAFGRRCEELEDARHK----LQHHLHKMLREITDQEHNVVALKE 339
++D +E+ G Q ++ +++ D + + LQ + + ++ D+E + +LKE
Sbjct: 517 IQDMAEEKGTQAGEIH-----DLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKE 571
Query: 340 AIKDKEEPLHIAQTRLXLLSHR--------PNMQLCRDAAQFRLVSEVEELYKSITALRE 391
+K + T L L ++ RD + E++ K + L+E
Sbjct: 572 RVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKE 631
Query: 392 K-------LLQAEQSLRNLKDIHMS------LEKDVTAMTNSVFIDRQK 427
K L + E SL +LK+ H S L+KD T + ++++K
Sbjct: 632 KVSLLQGDLSEKEASLLDLKE-HASSLASSGLKKDSRLKTLEIALEQKK 679
Score = 30.4 bits (67), Expect = 3.4
Identities = 36/185 (19%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 91 QDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQ--------RLERALDAME-V 141
QDS + +R+++ E RE + AE +++LAQ++ ++E L AME V
Sbjct: 801 QDSLRKKDDRIEELE----EALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKV 856
Query: 142 PFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAVSQIXLNXEH 201
+ + + S Q H+ + + + + E+ + A++ A+S+ N
Sbjct: 857 KQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIAL 916
Query: 202 MEICEMDWSDKVEAYNLDKTCGR---HHSQSTEVQAHPHSTTFQERGPRSASTPETRTKF 258
+E+ + E L + R Q T+ + + +++ +S+ + +T K
Sbjct: 917 LELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQTNHKP 976
Query: 259 TQDNL 263
+ D +
Sbjct: 977 SPDQI 981
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 38.9 bits (89), Expect = 0.010
Identities = 75/364 (20%), Positives = 138/364 (37%), Gaps = 59/364 (16%)
Query: 91 QDSTCRVGERLQDTNSWKSELQREV------EALAAETDLLLAQKQRLERALDAMEVPFS 144
QD RL++ K LQR++ E A +L L ++Q LER + E+
Sbjct: 50 QDGLATAQLRLRELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAE 109
Query: 145 -----ITTDNMQCSQRHQHTNLLRDHV------------ETELLKEAELI----RNIQEL 183
+ ++++C +L V E E+LK + + + + E
Sbjct: 110 RNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEK 169
Query: 184 LKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQE 243
++ + A+ ++ + E +E+ E NL + R S E T
Sbjct: 170 VRERLRMALERVAVLEEELELSNQ------ETLNLREQLSRRRSGLEEPGKDGDGQTLAN 223
Query: 244 R-GPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTS---EDLGLQCDAVN 299
GP S RT ++ L +R+R + L + + R S E+LG
Sbjct: 224 GLGPGGDSN--RRTAELEEAL---ERQRAEVCQLRERLAVLCRQMSQLEEELGTA----- 273
Query: 300 LAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKE---AIKDKEEPLHIAQTRLX 356
R + E+A KLQ L + L + D E + L++ + + + LH A +L
Sbjct: 274 ---HRELGKAEEANSKLQRDLKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKL- 329
Query: 357 LLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTA 416
N +++ + + +L + + ++KL Q Q L +I L + V A
Sbjct: 330 -----ENELASKESLYRQSEEKSRQLAEWLDDAKQKLQQTLQKAETLPEIEAQLAQRVAA 384
Query: 417 MTNS 420
+ +
Sbjct: 385 LNKA 388
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.012
Identities = 72/349 (20%), Positives = 133/349 (38%), Gaps = 58/349 (16%)
Query: 74 ESQQLAAETQALAQPTQQ--DSTCRVGERLQDTNSWKS----ELQREVEALAAETDLLLA 127
ES+ LA Q Q Q+ + C V + Q+ + S LQR ++ E LL A
Sbjct: 154 ESKDLAGRLQYSLQHIQELERALCAVSTQQQEEDRSSSCREAVLQRRLQQTIKERALLNA 213
Query: 128 QKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEA---------ELIR 178
++ +L +++ +++ + + + VE LKE EL R
Sbjct: 214 HVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELER 273
Query: 179 NIQELLKR----------AIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQ 228
++ EL + A+ V Q+ +H+ +VE ++Q
Sbjct: 274 SLSELKNQMAEPPSLAPPAVTSVVEQLQDEAKHLR-------QEVEGLEGKLQSQVENNQ 326
Query: 229 STEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTS 288
+ + + QE+ R + Q+ LC Q ERL L++
Sbjct: 327 ALSLLSKEQKQRLQEQEEMLREQEAQRVR-EQERLCE-QNERLREQQK------TLQEQG 378
Query: 289 EDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPL 348
E L Q +R + E+ K + L K + + DQE + +E ++ +EE L
Sbjct: 379 ERLRKQ--------EQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL 430
Query: 349 HIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVE----ELYKSITALREKL 393
++Q +H+ + QL F ++ + +L + + L+EKL
Sbjct: 431 ALSQ------NHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKL 473
>gi|7661844 coiled-coil domain containing 22 [Homo sapiens]
Length = 627
Score = 38.5 bits (88), Expect = 0.012
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 226 HSQSTEVQAHPHSTTFQERG-PRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCIL 284
HS+ P + Q P ++ PE T Q+ + RE+L+ N +
Sbjct: 295 HSEKFTFHLEPQAQATQVSDVPATSRRPEQVTWAAQEQELESLREQLEGVNRSI------ 348
Query: 285 RDTSEDLGLQCDAVNLAFGR-----RCEELEDARHKLQHHLHKMLREIT-DQEHNVVALK 338
E++ + ++F + R +L A + L E+ D N+ L+
Sbjct: 349 ----EEVEADMKTLGVSFVQAESECRHSKLSTAEREQALRLKSRAVELLPDGTANLAKLQ 404
Query: 339 EAIKDK-EEPLHIA----QTRLXLLS---HRPNMQLCRDAAQFRLVSEVEELYKSITALR 390
+++ + +H+A + R+ LL+ H +Q CR+ R ++E++EL++S+ A
Sbjct: 405 LVVENSAQRVIHLAGQWEKHRVPLLAEYRHLRKLQDCRELESSRRLAEIQELHQSVRAAA 464
Query: 391 EKLLQAEQSLRNLKDIHMSLEKDVTAM 417
E+ + E+ + L +L +DV+ +
Sbjct: 465 EEARRKEEVYKQLMSELETLPRDVSRL 491
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 38.1 bits (87), Expect = 0.016
Identities = 71/378 (18%), Positives = 150/378 (39%), Gaps = 47/378 (12%)
Query: 61 ANCNQSERELQGHESQQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAA 120
A + R+L+ Q A T A + DS +GE++ + K +L++E
Sbjct: 1169 AEFQKMRRDLEEATLQHEA--TAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKL 1226
Query: 121 ETDLLLAQKQRLERALDAMEVPFSITTDNM-----QCSQRHQHTNLLRDHVETELLKEAE 175
E D + + +++ +A +E D M + + + N L + E
Sbjct: 1227 ELDDVTSNMEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQRSVNDLTSQRAKLQTENGE 1286
Query: 176 LIRNIQELLKRAIMQAVSQIXLNX-EHMEICEMDWSDKVEAYNL---DKTCGRH------ 225
L R + E K A++ +++ L + +E + ++V+A N RH
Sbjct: 1287 LSRQLDE--KEALISQLTRGKLTYTQQLEDLKRQLEEEVKAKNALAHALQSARHDCDLLR 1344
Query: 226 --HSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCI 283
+ + TE +A + ++ + RTK+ D + + E L+ A
Sbjct: 1345 EQYEEETEAKAELQRVLSKA----NSEVAQWRTKYETDAI--QRTEELEEAK-------- 1390
Query: 284 LRDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKD 343
+ ++ L +AV A +C LE +H+LQ+ + ++ ++ + N A K
Sbjct: 1391 -KKLAQRLQEAEEAVE-AVNAKCSSLEKTKHRLQNEIEDLMVDV--ERSNAAAAALDKKQ 1446
Query: 344 KEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNL 403
+ +A+ + + ++ + A+ S EL+K A E L + L
Sbjct: 1447 RNFDKILAEWKQKYEESQSELESSQKEAR----SLSTELFKLKNAYEESL----EHLETF 1498
Query: 404 KDIHMSLEKDVTAMTNSV 421
K + +L+++++ +T +
Sbjct: 1499 KRENKNLQEEISDLTEQL 1516
Score = 34.7 bits (78), Expect = 0.18
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 66 SERELQGHESQQLAAETQALAQPTQ---QDSTCRVGERLQDTNSWKSEL---QREVEALA 119
+E E+Q + ++AAE Q + Q +D+ ++ + ++ + K + +R L
Sbjct: 1623 NEMEIQLSHANRMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQ 1682
Query: 120 AETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRD---------HVETEL 170
AE + L A ++ ER+ E T++ +Q Q+T+L+ ++TE+
Sbjct: 1683 AELEELRAVVEQTERSRKLAEQELIETSERVQLLHS-QNTSLINQKKKMDADLSQLQTEV 1741
Query: 171 LKEAELIRNIQELLKRAIMQA 191
+ + RN +E K+AI A
Sbjct: 1742 EEAVQECRNAEEKAKKAITDA 1762
Score = 31.6 bits (70), Expect = 1.5
Identities = 66/321 (20%), Positives = 122/321 (38%), Gaps = 50/321 (15%)
Query: 89 TQQDSTCRVGERLQDTNSWKSELQREVEALAAE-TDLLLAQKQRLERALDAMEVPFSITT 147
+ ++ R+ E L+ + + + EL+ ++ +L E DL L + + DA E +
Sbjct: 851 SMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIK 910
Query: 148 DNMQCSQRHQHTNLLRDHVETELLKEAELIRNIQELLKRAIMQAVSQIXLNXEHMEICEM 207
+ +Q + + N + +E E AEL KR + S++ + + +E+
Sbjct: 911 NKIQLEAKVKEMN---ERLEDEEEMNAELTAK-----KRKLEDECSELKRDIDDLELT-- 960
Query: 208 DWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDN--LCH 265
E + H + A E K T++ L
Sbjct: 961 -------------------LAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQE 1001
Query: 266 AQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCE-----ELEDARHKLQHHL 320
A ++ LD +L D + T + L+ +L E +LE A+ KL+ L
Sbjct: 1002 AHQQALD--DLQAEEDKVNTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDL 1059
Query: 321 HKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRLVSEVE 380
I D E++ L E +K K+ L+ R+ A +L +++
Sbjct: 1060 KLTQESIMDLENDKQQLDERLKKKDFELNALNARIE----------DEQALGSQLQKKLK 1109
Query: 381 ELYKSITALREKLLQAEQSLR 401
EL I L E+ L+AE++ R
Sbjct: 1110 ELQARIEELEEE-LEAERTAR 1129
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 38.1 bits (87), Expect = 0.016
Identities = 81/382 (21%), Positives = 142/382 (37%), Gaps = 52/382 (13%)
Query: 65 QSERELQGHESQ-QLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETD 123
+ E E+Q E + Q E Q A+ ++ + + ++ N + +LQ E E A +
Sbjct: 849 RQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEE 908
Query: 124 L---LLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLKEAELIRNI 180
+ L A+KQ LE L ME D Q Q + + E L+E E R
Sbjct: 909 MRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQK 968
Query: 181 QELLKRAIMQAVSQIXLNXEHMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTT 240
+L K ++ + EI MD Q+ ++
Sbjct: 969 LQLEK-----VTAEAKIKKLEDEILVMD------------------DQNNKLS------- 998
Query: 241 FQERGPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNL 300
+ER + T ++ +L + + ++ + +R E+ Q
Sbjct: 999 -KERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQ------ 1051
Query: 301 AFGRRCEELEDARHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSH 360
ELE + KL+ +I D + + LK + KEE L A RL
Sbjct: 1052 -------ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIA 1104
Query: 361 RPNMQLCRDAAQFRLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNS 420
+ N L + +S+++E S A R K AE+ R+L + +L+ ++ +S
Sbjct: 1105 QKNNALKKIRELEGHISDLQEDLDSERAARNK---AEKQKRDLGEELEALKTELEDTLDS 1161
Query: 421 VFIDRQKCMAHRTCYPTILQLA 442
+Q+ A R T+L+ A
Sbjct: 1162 T-ATQQELRAKREQEVTVLKKA 1182
Score = 37.0 bits (84), Expect = 0.036
Identities = 64/348 (18%), Positives = 137/348 (39%), Gaps = 40/348 (11%)
Query: 99 ERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQ---- 154
+++++ S+LQ ++++ A + QK+ L L+A++ T D+ Q
Sbjct: 1111 KKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRA 1170
Query: 155 -RHQHTNLLRDHVETEL-----------LKEAELIRNIQELLKRAIMQAVSQIXLNXEHM 202
R Q +L+ ++ E K A+ + + E L++ +A + + N + +
Sbjct: 1171 KREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQ-FKRAKANLDKNKQTL 1229
Query: 203 EICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTFQERGPRSASTPETRTKFTQDN 262
E D + ++ K H + E Q + + G R+ + + Q+
Sbjct: 1230 EKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSD-GERARAELNDKVHKLQNE 1288
Query: 263 -------LCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDARHK 315
L A+ + + A + L+DT E L + L + +LE+ R+
Sbjct: 1289 VESVTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE-TRQKLNVSTKLRQLEEERNS 1347
Query: 316 LQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLXLLSHRPNMQLCRDAAQFRL 375
LQ L + + + E ++ L + D ++ L + + L + + R
Sbjct: 1348 LQDQLDEEMEAKQNLERHISTLNIQLSDSKKKLQDFASTVEAL----------EEGKKRF 1397
Query: 376 VSEVEEL---YKSITALREKLLQAEQSL-RNLKDIHMSLEKDVTAMTN 419
E+E L Y+ A +KL + + L + L D+ + L+ ++N
Sbjct: 1398 QKEIENLTQQYEEKAAAYDKLEKTKNRLQQELDDLVVDLDNQRQLVSN 1445
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,760,599
Number of Sequences: 37866
Number of extensions: 629776
Number of successful extensions: 3965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 3425
Number of HSP's gapped (non-prelim): 751
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.