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Search of human proteins with 239744702
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo
sapiens]
(543 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo sa... 1079 0.0
gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens] 1079 0.0
gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens] 1013 0.0
gi|157779135 succinate-CoA ligase, GDP-forming beta subunit prec... 774 0.0
gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit prec... 375 e-104
gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens] 35 0.13
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens] 35 0.13
gi|144953907 major facilitator superfamily domain containing 6 [... 32 1.1
gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens] 31 3.3
gi|9966839 G protein-coupled receptor 84 [Homo sapiens] 30 5.6
gi|42542386 solute carrier family 22 (organic anion/cation trans... 30 7.4
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 29 9.6
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 29 9.6
gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo ... 29 9.6
>gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo
sapiens]
Length = 543
Score = 1079 bits (2790), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL 60
MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL
Sbjct: 1 MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL 60
Query: 61 IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ 120
IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ
Sbjct: 61 IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ 120
Query: 121 AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA 180
AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA
Sbjct: 121 AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA 180
Query: 181 LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK 240
LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK
Sbjct: 181 LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK 240
Query: 241 QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI 300
QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI
Sbjct: 241 QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI 300
Query: 301 FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET 360
FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET
Sbjct: 301 FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET 360
Query: 361 PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN 420
PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN
Sbjct: 361 PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN 420
Query: 421 GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN 480
GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN
Sbjct: 421 GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN 480
Query: 481 CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV 540
CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV
Sbjct: 481 CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV 540
Query: 541 AKK 543
AKK
Sbjct: 541 AKK 543
>gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]
Length = 543
Score = 1079 bits (2790), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL 60
MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL
Sbjct: 1 MGMLCTVPIGRWVLHSLSALDLWISSFYFLCRWHHGDCLVTPLSNQHQTLETSSQVSWSL 60
Query: 61 IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ 120
IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ
Sbjct: 61 IPTRRPHLHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQ 120
Query: 121 AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA 180
AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA
Sbjct: 121 AWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEA 180
Query: 181 LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK 240
LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK
Sbjct: 181 LEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATK 240
Query: 241 QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI 300
QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI
Sbjct: 241 QTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELI 300
Query: 301 FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET 360
FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET
Sbjct: 301 FKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET 360
Query: 361 PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN 420
PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN
Sbjct: 361 PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVN 420
Query: 421 GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN 480
GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN
Sbjct: 421 GAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVN 480
Query: 481 CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV 540
CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV
Sbjct: 481 CAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASV 540
Query: 541 AKK 543
AKK
Sbjct: 541 AKK 543
>gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
Length = 536
Score = 1013 bits (2618), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 32 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 91
RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT
Sbjct: 25 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 84
Query: 92 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 151
TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS
Sbjct: 85 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 144
Query: 152 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 211
LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG
Sbjct: 145 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 204
Query: 212 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 271
LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD
Sbjct: 205 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 264
Query: 272 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 331
QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS
Sbjct: 265 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 324
Query: 332 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 391
QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK
Sbjct: 325 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 384
Query: 392 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 451
SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE
Sbjct: 385 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 444
Query: 452 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 511
AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ
Sbjct: 445 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 504
Query: 512 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 543
EAQEILNSRLPITSAVDLEDAAKKAVASVAKK
Sbjct: 505 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 536
>gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
precursor [Homo sapiens]
Length = 432
Score = 774 bits (1999), Expect = 0.0
Identities = 404/432 (93%), Positives = 417/432 (96%), Gaps = 1/432 (0%)
Query: 113 IASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFF 172
+ASP+AAQA KLL+ALAL PRFL A S+AVQLTSRRWL+LQE QSKKLMSDN V VQRFF
Sbjct: 1 MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
Query: 173 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQM 232
VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLK GVHLTKDPNVVGQLAKQM
Sbjct: 61 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
Query: 233 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEV 292
IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD+SCNGP+LVGSPQ G+DIEEV
Sbjct: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
Query: 293 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 352
AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
Query: 353 EVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 412
EVNPFGETPEGQVVCFDAKINFDDNAEF+QKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
Query: 413 GNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILV 472
GNIACFVNGAGLAMATCDIIFLNG KPA+FLDLGGGVKEAQVYQAF L TADPKVEAILV
Sbjct: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
Query: 473 NIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLED 531
NIFGGIVNCAIIANGITKAC+ELELKVPLVV LEGTNVQEAQ+IL NS LPITSA+DLED
Sbjct: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
Query: 532 AAKKAVASVAKK 543
AAKKAVASVAKK
Sbjct: 421 AAKKAVASVAKK 432
>gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
precursor [Homo sapiens]
Length = 463
Score = 375 bits (963), Expect = e-104
Identities = 200/397 (50%), Positives = 274/397 (69%), Gaps = 1/397 (0%)
Query: 142 VQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 201
VQ +R LSL E S +L+ + V+V + +VA + +EA AK+L +K++V+KAQ+LAG
Sbjct: 45 VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
Query: 202 GRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 261
GRGKG F SGLK GV + P ++ QMIG L TKQT ++G N+V+V E
Sbjct: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
Query: 262 RETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 321
RE Y AI M++S GP+L+GS G++IE+VAA +PE I KE IDI EGIK QA ++A+
Sbjct: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
Query: 322 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 381
+GF + AA+ + KLY+LFLK DAT +E+NP E +G V+C DAKINFD N+ ++
Sbjct: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
Query: 382 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPAS 441
QK IF + D ++ + + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+G PA+
Sbjct: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
Query: 442 FLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 501
FLD+GGG QV +AF L T+D KV AILVNIFGGI+ C +IA GI A ++LE+K+P+
Sbjct: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
Query: 502 VVWLEGTNVQEAQEIL-NSRLPITSAVDLEDAAKKAV 537
VV L+GT V +A+ ++ +S L I + DL++AA+ V
Sbjct: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
Length = 1091
Score = 35.4 bits (80), Expect = 0.13
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 330 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 385
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
Query: 386 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 436
F E P E A D K + G I V G G ++ D I G
Sbjct: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
Query: 437 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 487
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
Query: 488 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 517
I +A ++ E +V + V G N QE ++
Sbjct: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
Length = 1101
Score = 35.4 bits (80), Expect = 0.13
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 330 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 385
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
Query: 386 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 436
F E P E A D K + G I V G G ++ D I G
Sbjct: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
Query: 437 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 487
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
Query: 488 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 517
I +A ++ E +V + V G N QE ++
Sbjct: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
>gi|144953907 major facilitator superfamily domain containing 6
[Homo sapiens]
Length = 791
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 467 VEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSA 526
+ +LVN FG A GI AC + L L+ WL + +E + +L R+P+ S+
Sbjct: 589 IGGVLVNYFGA----AATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSS 644
>gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens]
Length = 790
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 215 GVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQS- 273
G L +DP+ L + I YN+ + + + LD + I + S
Sbjct: 403 GTVLAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWYNITVTASE 462
Query: 274 CNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQ 315
+ P L+ GI + +V + PEL + I + E K Q
Sbjct: 463 IDNPDLLSHVTVGIRVLDVNDNPPELAREYDIIVCENSKPGQ 504
>gi|9966839 G protein-coupled receptor 84 [Homo sapiens]
Length = 396
Score = 30.0 bits (66), Expect = 5.6
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 272 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 321
Q + + G P EGI E V+A+ + + + ++ + I +A++MAE
Sbjct: 239 QELDSRLASGGPSEGISSEPVSAATTQTLEGDSSEVGDQINSKRAKQMAE 288
>gi|42542386 solute carrier family 22 (organic anion/cation
transporter), member 9 [Homo sapiens]
Length = 553
Score = 29.6 bits (65), Expect = 7.4
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 118 AAQAWKLLQALALLPRFLVARSRAVQLTSRRWL-----------SLQECQSKKLMSDNRV 166
A + W +LQ + +P F++ + + L S RWL L++ + M + R
Sbjct: 254 AIRDWHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARD 313
Query: 167 TVQRFFVADTANEALEAAKR 186
T+ + T + LEAA++
Sbjct: 314 TLTLEILKSTMKKELEAAQK 333
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 29.3 bits (64), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 46 QHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQ 81
QH+ L+ Q W L H HP + QQQ+Q
Sbjct: 434 QHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQ 469
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 29.3 bits (64), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 46 QHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQ 81
QH+ L+ Q W L H HP + QQQ+Q
Sbjct: 434 QHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQ 469
>gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo
sapiens]
Length = 375
Score = 29.3 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 35 HGDCLVTPLSNQHQTLETSSQV-SW--------SLIPTRRPHLHPRMDFRPQQQRQPYFL 85
H DC V+ + +H+ S++V SW SL+ +R P +HP Q P
Sbjct: 228 HRDCCVSLTAPKHRGDGDSARVTSWDDTTHHNRSLLGSRGPRVHPGPHHCHHQGPGPGLE 287
Query: 86 CDTGATTFLTGP 97
TGA FL P
Sbjct: 288 PPTGAPQFLPSP 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,078,861
Number of Sequences: 37866
Number of extensions: 811595
Number of successful extensions: 1781
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1772
Number of HSP's gapped (non-prelim): 14
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.