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Search of human proteins with 116734689
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116734689 socius isoform 3 [Homo sapiens]
(400 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116734689 socius isoform 3 [Homo sapiens] 816 0.0
gi|116734681 socius isoform 1 [Homo sapiens] 684 0.0
gi|116734679 socius isoform 2 [Homo sapiens] 684 0.0
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 58 1e-08
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 58 1e-08
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 57 2e-08
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 57 2e-08
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 56 7e-08
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 56 7e-08
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 56 7e-08
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 54 2e-07
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 51 2e-06
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 51 2e-06
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 51 2e-06
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 51 2e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 50 3e-06
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 48 1e-05
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 48 1e-05
gi|117938297 UBX domain protein 2B [Homo sapiens] 48 2e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 47 2e-05
gi|24308414 solute carrier family 10, member 4 [Homo sapiens] 47 3e-05
gi|45827729 scribble isoform b [Homo sapiens] 47 3e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 47 3e-05
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 47 4e-05
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 816 bits (2109), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG 60
MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG
Sbjct: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG 60
Query: 61 APVSRQGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRN 120
APVSRQGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRN
Sbjct: 61 APVSRQGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRN 120
Query: 121 GIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDP 180
GIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDP
Sbjct: 121 GIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDP 180
Query: 181 FPGEGRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQN 240
FPGEGRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQN
Sbjct: 181 FPGEGRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQN 240
Query: 241 CCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTI 300
CCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTI
Sbjct: 241 CCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTI 300
Query: 301 GDVRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK 360
GDVRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK
Sbjct: 301 GDVRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK 360
Query: 361 FSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
FSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ
Sbjct: 361 FSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 684 bits (1765), Expect = 0.0
Identities = 334/336 (99%), Positives = 335/336 (99%)
Query: 65 RQGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM 124
+ GDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM
Sbjct: 152 KPGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM 211
Query: 125 FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE 184
FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE
Sbjct: 212 FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE 271
Query: 185 GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL 244
GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL
Sbjct: 272 GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL 331
Query: 245 PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR 304
PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR
Sbjct: 332 PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR 391
Query: 305 ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG 364
ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG
Sbjct: 392 ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG 451
Query: 365 PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ
Sbjct: 452 PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 487
Score = 70.1 bits (170), Expect = 3e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGD 33
MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGD
Sbjct: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGD 33
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 684 bits (1765), Expect = 0.0
Identities = 334/336 (99%), Positives = 335/336 (99%)
Query: 65 RQGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM 124
+ GDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM
Sbjct: 185 KPGDSLAPPEVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMM 244
Query: 125 FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE 184
FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE
Sbjct: 245 FDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGE 304
Query: 185 GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL 244
GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL
Sbjct: 305 GRVVGRQLMHKALDRVEEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPL 364
Query: 245 PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR 304
PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR
Sbjct: 365 PARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVR 424
Query: 305 ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG 364
ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG
Sbjct: 425 ALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPG 484
Query: 365 PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ
Sbjct: 485 PCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 520
Score = 137 bits (345), Expect = 2e-32
Identities = 66/66 (100%), Positives = 66/66 (100%)
Query: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG 60
MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG
Sbjct: 1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIG 60
Query: 61 APVSRQ 66
APVSRQ
Sbjct: 61 APVSRQ 66
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 58.2 bits (139), Expect = 1e-08
Identities = 26/40 (65%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 363 PGPCPGPGPG----PSPGPGPGPSPGPGPGPSPCPGPSPS 398
PG P P PG P PGPGPGP PGPGPGP P PGP S
Sbjct: 321 PGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS 360
Score = 56.2 bits (134), Expect = 5e-08
Identities = 25/41 (60%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 363 PGPCPGPGPGPSPG----PGPGPSPGPGPGPSPCPGPSPSP 399
P P PG P P PG P PGP PGPGPGP P PGP P P
Sbjct: 317 PPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP 357
Score = 55.8 bits (133), Expect = 7e-08
Identities = 26/49 (53%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPG-----PGPSPCPGPSPS 398
P + P P PGPGPGP PGPGPGP PGPG P P P PS
Sbjct: 327 PPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPS 375
Score = 47.4 bits (111), Expect = 2e-05
Identities = 21/37 (56%), Positives = 21/37 (56%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
P P P PG P P PG P PGPGP P PGP P P
Sbjct: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGP 351
Score = 36.6 bits (83), Expect = 0.041
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 363 PGPCPGPGPGPSPGPG---PGPSPGPGPGPS---PCPGP 395
PGP PGPGPGP PG P P P PS P P P
Sbjct: 345 PGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRP 383
Score = 35.0 bits (79), Expect = 0.12
Identities = 16/33 (48%), Positives = 16/33 (48%)
Query: 367 PGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
P P P P PG P P PG P PGP P P
Sbjct: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGP 343
Score = 32.7 bits (73), Expect = 0.60
Identities = 19/57 (33%), Positives = 21/57 (36%)
Query: 343 PKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
P +L+ P PGP PGPGPGP G G P P P P
Sbjct: 327 PPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRP 383
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 58.2 bits (139), Expect = 1e-08
Identities = 25/40 (62%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGP--GPGPSPCPGPSPSP 399
+PGP PGP PGP GP PGP PGP GP P PGP P P
Sbjct: 219 NPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGP 258
Score = 56.6 bits (135), Expect = 4e-08
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 350 RARRAPKSSLKFSPGPCPGPGPGPS--PGPGPGPSPGPGPGPSPCPGPSPSP 399
RA++ ++L PGP P P PGP+ PGP PG PGP PGP+ P P P+P
Sbjct: 83 RAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAP 134
Score = 56.2 bits (134), Expect = 5e-08
Identities = 25/39 (64%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGP--SPCPGPSPSP 399
PGP PGP GP GP PGP PGP PGP P PGP P P
Sbjct: 204 PGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGP 242
Score = 55.8 bits (133), Expect = 7e-08
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 18/56 (32%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGP------------------GPGPSPCPGPSPSP 399
+PGP PGP PGP PGP GP PGP GP P P PGP P P
Sbjct: 175 NPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGP 230
Score = 55.8 bits (133), Expect = 7e-08
Identities = 24/38 (63%), Positives = 26/38 (68%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
+PGP PGP GP+PG PGP PGP GP P GP PSP
Sbjct: 235 NPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSP 272
Score = 55.5 bits (132), Expect = 9e-08
Identities = 25/38 (65%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGP--SPCPGPSPSP 399
GP PGP PGP+PGP PGP GP PGP P PGP P P
Sbjct: 173 GPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGP 210
Score = 54.7 bits (130), Expect = 1e-07
Identities = 24/39 (61%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCP--GPSPSP 399
P P PGP GP GP PGP PGP PGP P P GP P P
Sbjct: 160 PAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGP 198
Score = 53.5 bits (127), Expect = 3e-07
Identities = 22/36 (61%), Positives = 23/36 (63%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
GP GP PGP PGP PGP GP PGP P P P+P
Sbjct: 213 GPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNP 248
Score = 53.1 bits (126), Expect = 4e-07
Identities = 23/37 (62%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPG--PGPGPSPCPGPSP 397
PGP GP PGP PGP GP+PG PGP P P GP P
Sbjct: 228 PGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGP 264
Score = 52.0 bits (123), Expect = 9e-07
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
GP PGP GP+P PGP P GP P P PGP+P P
Sbjct: 151 GPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGP 186
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/37 (62%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 365 PCPGPGPGPSPGPGPGPSPGPGPGPSPCP--GPSPSP 399
P PGP PGP GP GP+PGP PGP P P GP+P P
Sbjct: 202 PIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGP 238
Score = 50.8 bits (120), Expect = 2e-06
Identities = 23/39 (58%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGP--GPSPCPGPSPSP 399
PGP GP PG PGP PGP GPGP GP P P P P
Sbjct: 240 PGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGP 278
Score = 47.4 bits (111), Expect = 2e-05
Identities = 21/37 (56%), Positives = 21/37 (56%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP PG PGP PGP PSP P P P P GP P
Sbjct: 110 PGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIP 146
Score = 47.0 bits (110), Expect = 3e-05
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 363 PGPCPGP--GPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP PGP GPGP GP P P+ PGPG PGP SP
Sbjct: 252 PGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSP 290
Score = 45.4 bits (106), Expect = 9e-05
Identities = 23/47 (48%), Positives = 24/47 (51%), Gaps = 10/47 (21%)
Query: 363 PGPCPGPG--PGPSPGPGPGPSPGP--------GPGPSPCPGPSPSP 399
PGP PGP P P P P PGP GP GP P P GP+P P
Sbjct: 118 PGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIP 164
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/39 (53%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 363 PGPCPGPGPGPS--PGPGPGPSPGPGPGPSPCPGPSPSP 399
PG PGP PGP+ P P P P PGP GP PGP P
Sbjct: 114 PGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGP 152
Score = 44.7 bits (104), Expect = 2e-04
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 362 SPGPCPGPGPGPSPGPGP--GPSPGPG--PGPSPCPGPSP 397
+PG PGP PGP GPGP GP P P PGP GP P
Sbjct: 247 NPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGP 286
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/33 (54%), Positives = 19/33 (57%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGP 395
PG P GPG PG G P+P PGPG P P P
Sbjct: 300 PGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAP 332
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/41 (53%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 363 PGPCPGPGP--GPSPGPGPGPSPG--PGPGPSPCPGPSPSP 399
PGP GPGP GP P P P PG GPGP PG SP
Sbjct: 256 PGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSP 296
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 362 SPGPCPG------PGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
SPG PG PG GP G P P PGPG P+P P SP
Sbjct: 295 SPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSP 338
Score = 39.7 bits (91), Expect = 0.005
Identities = 30/74 (40%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 337 QAAGLVPKAALLLRARRAPKSSLKFS-PGPCP------GPGPGPSPG------PGPGPSP 383
+AA LVP AA +R P L + P C GPG G PGPGP P
Sbjct: 42 RAAPLVP-AASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIP 100
Query: 384 GPGPGPSPCPGPSP 397
P PGP+ PGP P
Sbjct: 101 APIPGPAQIPGPLP 114
Score = 38.9 bits (89), Expect = 0.008
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Query: 363 PGPCPGPG----PGPSPGPGP--GPSPGPGPG--PSPCPGPSPSP 399
PGP PG PG PG P GP GPG G P+P PGP P
Sbjct: 284 PGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLP 328
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 57.4 bits (137), Expect = 2e-08
Identities = 25/44 (56%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCP-------GPSPSP 399
PG P PGP P PGP PGP GP PGP P P GPSP P
Sbjct: 7 PGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGP 50
Score = 50.1 bits (118), Expect = 4e-06
Identities = 24/47 (51%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 363 PGPCPGPGPGPSP----GPGPGPSP-------GPGPGPSPCPGPSPS 398
PGP PGPGP P P PGPGPSP GP PGP P P+
Sbjct: 13 PGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59
Score = 43.1 bits (100), Expect = 4e-04
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 362 SPGPCPGPGPGPSPGPGP-----GPSPGPG--PGPSPCPGPSPSPQ 400
SPGP GP PGP P PG GPSPGP P P G + PQ
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQ 67
Score = 32.7 bits (73), Expect = 0.60
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPS---PCPG-PSP 397
P P PG P P+P P PGPS P PG PSP
Sbjct: 279 PVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSP 317
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 354 APKSSLKFSPGPCPGPGP-----GPSPGPGPGPSPGPGPGPSPCP 393
+P L SPGP P PG GPSPGP P P G + P
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFP 66
Score = 30.0 bits (66), Expect = 3.9
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 368 GPGP---GPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
GPGP GPS P P P PG PSP P + P
Sbjct: 264 GPGPELSGPST-PQKLPVPAPGGRPSPAPPAAAQP 297
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 57.4 bits (137), Expect = 2e-08
Identities = 25/44 (56%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCP-------GPSPSP 399
PG P PGP P PGP PGP GP PGP P P GPSP P
Sbjct: 7 PGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGP 50
Score = 50.1 bits (118), Expect = 4e-06
Identities = 24/47 (51%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 363 PGPCPGPGPGPSP----GPGPGPSP-------GPGPGPSPCPGPSPS 398
PGP PGPGP P P PGPGPSP GP PGP P P+
Sbjct: 13 PGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59
Score = 43.1 bits (100), Expect = 4e-04
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 362 SPGPCPGPGPGPSPGPGP-----GPSPGPG--PGPSPCPGPSPSPQ 400
SPGP GP PGP P PG GPSPGP P P G + PQ
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQ 67
Score = 32.7 bits (73), Expect = 0.60
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPS---PCPG-PSP 397
P P PG P P+P P PGPS P PG PSP
Sbjct: 279 PVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSP 317
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 354 APKSSLKFSPGPCPGPGP-----GPSPGPGPGPSPGPGPGPSPCP 393
+P L SPGP P PG GPSPGP P P G + P
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFP 66
Score = 30.0 bits (66), Expect = 3.9
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 368 GPGP---GPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
GPGP GPS P P P PG PSP P + P
Sbjct: 264 GPGPELSGPST-PQKLPVPAPGGRPSPAPPAAAQP 297
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 55.8 bits (133), Expect = 7e-08
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
AP + +P P P P P P+P P P+P P P P+P P P+P+P
Sbjct: 160 APVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 48.1 bits (113), Expect = 1e-05
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 343 PKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
P AA + A AP + +P P P P P+P P P P+P P P P+P P S +
Sbjct: 157 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAE 214
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 355 PKSSLKFSPGPCPGPGPGP----------SPGPGPGPSPGPGPGPSPCPGPSPSP 399
P L +P P P P P +P P P P+P P P P P P+P+P
Sbjct: 139 PVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193
Score = 35.4 bits (80), Expect = 0.092
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
Query: 341 LVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSP--GPGPGPSPGPGPGP--------- 389
L P A L AP+ L P P P P P P P P P+P P P
Sbjct: 108 LEPAAESLDGLEEAPEQ-LPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAV 166
Query: 390 -SPCPGPSPSP 399
+P P P+P+P
Sbjct: 167 LAPAPAPAPAP 177
Score = 33.1 bits (74), Expect = 0.46
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 339 AGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSP 383
A L P A AP +P P P P P P+P P P +P
Sbjct: 165 AVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 30.4 bits (67), Expect = 3.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPG 388
AP ++ +P P P P P P+P P P G
Sbjct: 182 APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQG 216
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 55.8 bits (133), Expect = 7e-08
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
AP + +P P P P P P+P P P+P P P P+P P P+P+P
Sbjct: 160 APVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 48.1 bits (113), Expect = 1e-05
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 343 PKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
P AA + A AP + +P P P P P+P P P P+P P P P+P P S +
Sbjct: 157 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAE 214
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 355 PKSSLKFSPGPCPGPGPGP----------SPGPGPGPSPGPGPGPSPCPGPSPSP 399
P L +P P P P P +P P P P+P P P P P P+P+P
Sbjct: 139 PVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193
Score = 35.4 bits (80), Expect = 0.092
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
Query: 341 LVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSP--GPGPGPSPGPGPGP--------- 389
L P A L AP+ L P P P P P P P P P+P P P
Sbjct: 108 LEPAAESLDGLEEAPEQ-LPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAV 166
Query: 390 -SPCPGPSPSP 399
+P P P+P+P
Sbjct: 167 LAPAPAPAPAP 177
Score = 33.1 bits (74), Expect = 0.46
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 339 AGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSP 383
A L P A AP +P P P P P P+P P P +P
Sbjct: 165 AVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 30.4 bits (67), Expect = 3.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPG 388
AP ++ +P P P P P P+P P P G
Sbjct: 182 APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQG 216
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 55.8 bits (133), Expect = 7e-08
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
AP + +P P P P P P+P P P+P P P P+P P P+P+P
Sbjct: 171 APVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 48.1 bits (113), Expect = 1e-05
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 343 PKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
P AA + A AP + +P P P P P+P P P P+P P P P+P P S +
Sbjct: 168 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAE 225
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 355 PKSSLKFSPGPCPGPGPGP----------SPGPGPGPSPGPGPGPSPCPGPSPSP 399
P L +P P P P P +P P P P+P P P P P P+P+P
Sbjct: 150 PVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 204
Score = 35.4 bits (80), Expect = 0.092
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
Query: 341 LVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSP--GPGPGPSPGPGPGP--------- 389
L P A L AP+ L P P P P P P P P P+P P P
Sbjct: 119 LEPAAESLDGLEEAPEQ-LPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAV 177
Query: 390 -SPCPGPSPSP 399
+P P P+P+P
Sbjct: 178 LAPAPAPAPAP 188
Score = 33.1 bits (74), Expect = 0.46
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 339 AGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSP 383
A L P A AP +P P P P P P+P P P +P
Sbjct: 176 AVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 220
Score = 30.4 bits (67), Expect = 3.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 354 APKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPG 388
AP ++ +P P P P P P+P P P G
Sbjct: 193 APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQG 227
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS-PCPGPSPSP 399
P L +P P P PGPGPSPG GPSPGP PG + GPSP P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGP 49
Score = 49.3 bits (116), Expect = 6e-06
Identities = 23/40 (57%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 367 PGPGPGPSPGPGPGPSP-------GPGPGPSPCPGPSPSP 399
PGPGPGP PGPGPGP+P G G P PGPS P
Sbjct: 230 PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 347 LLLRARRAPKSSLKFSPGPCPGPG--------PGPS---PGPGPGPSPGPGPGPSPCP 393
+L R + P G P PG P PS GPGPGP PGPGPGP P P
Sbjct: 189 MLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAP 246
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 332 DTLTLQAAGLVPKAALLLRARRAPKSSLKFS---PGPCPGPGPGPSPGP----------G 378
D L + G P + + P S+ + PGP PGPGPGP P P G
Sbjct: 198 DHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGG 257
Query: 379 PG-PSPGPGPGPSPCPGPSP 397
P P PGP P PG P
Sbjct: 258 PNMPPPGPSGVPPGMPGQPP 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 25/52 (48%)
Query: 363 PGPCPGPGP------GPSPGPGPG-------------------PSPGPGPGP 389
PGP PGPGP GPSPGP PG P+ GPG P
Sbjct: 14 PGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 34.3 bits (77), Expect = 0.20
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 354 APKSSLKFSPGPCPGPGP---GPSPGPGPGPSPGPGPGPSPCP 393
+P + L SPGP PG GPSPGP P P GP P
Sbjct: 23 SPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYP 65
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPC----PGPSPSPQ 400
SP P GP GP GPG +P G P GP+P Q
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 363 PGPCPGP----GPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P G P P+ GP GP GPG +P G P
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 303 VRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFS 362
V AL AR+ +T PT + A L P A + R A + L
Sbjct: 587 VSALTTPARLSPVDFHYSLATQVPTFEITSPNSAHAVSLPPAAPISYRL--AEQQPLLRH 644
Query: 363 PGPCPGPGPGPSPGPGPG------------PSPGPGPGPSPC 392
P P PGPGPGP PGPGPG P+ GPGP C
Sbjct: 645 PAP-PGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTC 685
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 303 VRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFS 362
V AL AR+ +T PT + A L P A + R A + L
Sbjct: 595 VSALTTPARLSPVDFHYSLATQVPTFEITSPNSAHAVSLPPAAPISYRL--AEQQPLLRH 652
Query: 363 PGPCPGPGPGPSPGPGPG------------PSPGPGPGPSPC 392
P P PGPGPGP PGPGPG P+ GPGP C
Sbjct: 653 PAP-PGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTC 693
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 303 VRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFS 362
V AL AR+ +T PT + A L P A + R A + L
Sbjct: 601 VSALTTPARLSPVDFHYSLATQVPTFEITSPNSAHAVSLPPAAPISYRL--AEQQPLLRH 658
Query: 363 PGPCPGPGPGPSPGPGPG------------PSPGPGPGPSPC 392
P P PGPGPGP PGPGPG P+ GPGP C
Sbjct: 659 PAP-PGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTC 699
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 303 VRALLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFS 362
V AL AR+ +T PT + A L P A + R A + L
Sbjct: 593 VSALTTPARLSPVDFHYSLATQVPTFEITSPNSAHAVSLPPAAPISYRL--AEQQPLLRH 650
Query: 363 PGPCPGPGPGPSPGPGPG------------PSPGPGPGPSPC 392
P P PGPGPGP PGPGPG P+ GPGP C
Sbjct: 651 PAP-PGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTC 691
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 50.4 bits (119), Expect = 3e-06
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 338 AAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPG 386
AAG P+ A A+ A ++L GP PGPGPGP PGPGPG GPG
Sbjct: 147 AAG--PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
Score = 46.6 bits (109), Expect = 4e-05
Identities = 23/44 (52%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 364 GPCPGP-GPGPSPGP-------GPGPSPGPGPGPSPCPGPSPSP 399
GP P P GP GP GPGP PGPGPGP P PG P
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGP 192
Score = 46.6 bits (109), Expect = 4e-05
Identities = 21/38 (55%), Positives = 21/38 (55%), Gaps = 7/38 (18%)
Query: 364 GPCPGPGP-------GPSPGPGPGPSPGPGPGPSPCPG 394
GP GP GP PGPGPGP PGPGPG PG
Sbjct: 156 GPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
Score = 46.2 bits (108), Expect = 5e-05
Identities = 32/83 (38%), Positives = 33/83 (39%), Gaps = 27/83 (32%)
Query: 336 LQAAGLVPKAALLLRARRAPKSSLKFSPGPCP-------GPGPGPS-------------- 374
L AG P AA L R P S P P GP P P+
Sbjct: 114 LVPAGPAPPAAKL----RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR 169
Query: 375 --PGPGPGPSPGPGPGPSPCPGP 395
PGPGPGP PGPGPGP GP
Sbjct: 170 AGPGPGPGPGPGPGPGPGKPAGP 192
Score = 30.0 bits (66), Expect = 3.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 351 ARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSP-----CPGPSP 397
A P + + +PG P P P PG G PGP PSP GP+P
Sbjct: 71 AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGP-PSPRRPLVPAGPAP 121
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 48.1 bits (113), Expect = 1e-05
Identities = 20/37 (54%), Positives = 21/37 (56%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PG GPGPG PG GPG G PGP+ PGP P
Sbjct: 169 PGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGP 205
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PG PG G PGPG GP GPG G PGP+ P
Sbjct: 163 PGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 19/37 (51%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP GPG GP G G P P GPGP P SP
Sbjct: 175 PGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSP 211
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/36 (50%), Positives = 18/36 (50%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
G PG G P G GPGP GPG GP G P P
Sbjct: 160 GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGP 195
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/42 (50%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
Query: 364 GPCPGPGPGPSPG------PGPGPSPGPGPGP----SPCPGP 395
GP PG GPG PG PGP PGP GP SPC P
Sbjct: 174 GPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPP 215
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 14/52 (26%)
Query: 362 SPGPCPGPGPGP--------------SPGPGPGPSPGPGPGPSPCPGPSPSP 399
+PGP PG GP GPG G PG G GP P GP P
Sbjct: 134 NPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP 185
Score = 36.2 bits (82), Expect = 0.054
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPG 394
G G GPG PG G PGPG GP PG
Sbjct: 156 GSGSGSGPGCGSVPGSGSGPGPGSGPGSGPG 186
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 48.1 bits (113), Expect = 1e-05
Identities = 20/37 (54%), Positives = 21/37 (56%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PG GPGPG PG GPG G PGP+ PGP P
Sbjct: 169 PGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGP 205
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PG PG G PGPG GP GPG G PGP+ P
Sbjct: 163 PGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 19/37 (51%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP GPG GP G G P P GPGP P SP
Sbjct: 175 PGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSP 211
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/36 (50%), Positives = 18/36 (50%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
G PG G P G GPGP GPG GP G P P
Sbjct: 160 GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGP 195
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/42 (50%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
Query: 364 GPCPGPGPGPSPG------PGPGPSPGPGPGP----SPCPGP 395
GP PG GPG PG PGP PGP GP SPC P
Sbjct: 174 GPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPP 215
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 14/52 (26%)
Query: 362 SPGPCPGPGPGP--------------SPGPGPGPSPGPGPGPSPCPGPSPSP 399
+PGP PG GP GPG G PG G GP P GP P
Sbjct: 134 NPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP 185
Score = 36.2 bits (82), Expect = 0.054
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 364 GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPG 394
G G GPG PG G PGPG GP PG
Sbjct: 156 GSGSGSGPGCGSVPGSGSGPGPGSGPGSGPG 186
>gi|117938297 UBX domain protein 2B [Homo sapiens]
Length = 331
Score = 47.8 bits (112), Expect = 2e-05
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 113 IPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNG-VPFKVSDLRNQ 171
I LKL+ NG + DG +P+ +P+ + L + G P ELQRL G V + D ++Q
Sbjct: 144 ILLKLWSNGFSLDDGELRPYNEPTNAQFLESVKRGEIPLELQRLVHGGQVNLDMEDHQDQ 203
Query: 172 VYLEDGL--DPFPGEGRVVG 189
Y++ L F GEG+ +G
Sbjct: 204 EYIKPRLRFKAFSGEGQKLG 223
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 47.4 bits (111), Expect = 2e-05
Identities = 23/37 (62%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGP-GPSP-CPGPSP 397
PGP PG PGP PGP PG PGP P GP P P P+P
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 363 PGPCPGPGPGPSPGPGPGPSP-GPGPG-PSPCPGPSPSPQ 400
PG PGP PGP PG PGP P GP P P P P P P+
Sbjct: 464 PGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR 503
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/67 (38%), Positives = 26/67 (38%), Gaps = 20/67 (29%)
Query: 353 RAPKSSLKFSPGPCPG----------PG----------PGPSPGPGPGPSPGPGPGPSPC 392
R P PGP PG PG PGP PG PGP PGP PG P
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 481
Query: 393 PGPSPSP 399
P P P
Sbjct: 482 PPPRGPP 488
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 363 PGPCPGPGPGPSPGPGP-GPSPG-PGPGPSPCPGPSP 397
PGP PGP PG PGP P GP P P P P P P P
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
Score = 35.4 bits (80), Expect = 0.092
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 363 PGPCP-GPGPGPS---PGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP P GP P P PGP G PGP PG P P P
Sbjct: 408 PGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMP 448
Score = 34.3 bits (77), Expect = 0.20
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 352 RRAPKSSL---KFSPGPCPGPGP-GPSPGP---GPGPSPGPGPGPSPCPGPSPSP 399
++AP S+ + P PGP P GP P P PGP G PGP P P P
Sbjct: 390 QQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRP 444
Score = 32.3 bits (72), Expect = 0.78
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 363 PGPCPG--PGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
PGP PG PGP P P P P P P P PG P
Sbjct: 472 PGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPP 510
Score = 29.6 bits (65), Expect = 5.0
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 23/60 (38%)
Query: 363 PGPCPG---PGPGPS--PGPGPGPSP------------------GPGPGPSPCPGPSPSP 399
P P P PGP PGP PG P PGP P PGP P P
Sbjct: 415 PPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGP 474
>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
Length = 437
Score = 47.0 bits (110), Expect = 3e-05
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 324 FPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGP--GP 381
F P L + TL A+ L P + L +P GPGPG S GPGP G
Sbjct: 11 FAPLLRDNYTLAPNASSL------------GPGTDLALAPASSAGPGPGLSLGPGPSFGF 58
Query: 382 SPGPGPGPSPCP----------GPSPSPQ 400
SPGP P P P GPSP P+
Sbjct: 59 SPGPTPTPEPTTSGLAGGAASHGPSPFPR 87
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 47.0 bits (110), Expect = 3e-05
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 254 ETPTLAAERERSQESPNTPAPPLS----MLRIKSENGEQAFLLMMQPDNTIGDVRALLAQ 309
E P A+ S++SP +P PPL + K+E Q L + P+ + A+
Sbjct: 1431 EQPPWASPSPTSRQSPASP-PPLGGGAPVRTAKAERRHQERLRVQSPEPPAPERALSPAE 1489
Query: 310 ARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGP 369
R ++A ++ + D L Q +V + R R P L +P P P P
Sbjct: 1490 LRALEAEKRALWRAARMKSLEQDALRAQ---MVLSRSQEGRGTRGPLERLAEAPSPAPTP 1546
Query: 370 GPGPSPGPGPGPSPGPGP------------GPSPCPGP 395
P P GP S PG PSP PGP
Sbjct: 1547 SPTPVEDLGPQTSTSPGRLSPDFAEELRSLEPSPSPGP 1584
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.0 bits (110), Expect = 3e-05
Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 363 PGPCPGPGPGPSPGPGPG----------PSPGPGPGPSPCPGPSPSP 399
P PGPGPGP GPGPG P PG GPG S PG P P
Sbjct: 188 PAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLS-TPGGHPKP 233
Score = 41.6 bits (96), Expect = 0.001
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGP-SPCPGPSP 397
P S + +P GP P P+ PGPGP P GPGP P G P
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMP 213
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 325 PPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPG 384
PP QD + + A G P + AP +S P P G P GPGP P+P
Sbjct: 99 PPPPPQDSSKPVVAQGPGPAPGV----GSAPPASSSAPPATPPTSGAPPGSGPGPTPTPP 154
Query: 385 PGPGPSPCPGPSPSP 399
P +P P P+P
Sbjct: 155 PAVTSAPPGAPPPTP 169
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/35 (48%), Positives = 17/35 (48%)
Query: 363 PGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSP 397
P P P PGP PGP GP PG G GP P
Sbjct: 184 PPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKP 218
Score = 34.3 bits (77), Expect = 0.20
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 11/46 (23%)
Query: 363 PGPCPGPGPG----------PSPGPGPGPS-PGPGPGPSPCPGPSP 397
PGP GPGPG P PG GPG S PG P P G P
Sbjct: 196 PGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEP 241
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 22/66 (33%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPG----------------------PGPGPSPC 392
P+ + P P P P GPGP+PG PG GP P
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT 150
Query: 393 PGPSPS 398
P P P+
Sbjct: 151 PTPPPA 156
Score = 29.6 bits (65), Expect = 5.0
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
P L + GP GPGPG S P P P P P P PQ
Sbjct: 36 PGMGLNQNRGPM-GPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQ 80
Score = 29.3 bits (64), Expect = 6.6
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 367 PGPGPGPSPGPGP-GPSPGPGPGPSPCPGPSPSPQ 400
P PG G + GP GP PG P P P P Q
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQ 68
Score = 28.9 bits (63), Expect = 8.6
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 355 PKSSLKFSPGPCPGPGPGPSPGPGPGPSPGP--GPGPSPCPGPSPSP 399
P+ P P P P P P P S P GP P PG +P
Sbjct: 79 PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP 125
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 46.6 bits (109), Expect = 4e-05
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 14/65 (21%)
Query: 349 LRARRAPKSSLKFSPGPCPG----PG--------PGPSPGPGPGPSPGPGPGPSPCP--G 394
L AP + +F+PGP PG PG P P+ GP PGPS PG P+P P G
Sbjct: 312 LTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLG 371
Query: 395 PSPSP 399
P P+P
Sbjct: 372 PVPAP 376
Score = 46.2 bits (108), Expect = 5e-05
Identities = 21/41 (51%), Positives = 23/41 (56%)
Query: 359 LKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 399
L+ P P GP PGPS PG P+P P GP P PG P P
Sbjct: 342 LELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
Score = 38.5 bits (88), Expect = 0.011
Identities = 22/54 (40%), Positives = 24/54 (44%)
Query: 338 AAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPSP 391
A G P L L P +L PGP PG P+P P GP P PG P P
Sbjct: 329 APGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
Score = 36.6 bits (83), Expect = 0.041
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 327 TLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPG 386
T++ + L G +A L RA+ P +P PG +PGP PG P PG
Sbjct: 279 TVWHYEVPELLPEGSSAQAVSLSRAQE-PAQPPALTPESAPGCTTEFAPGPAPGTEPVPG 337
Query: 387 ----------PGPSPCPGPSPSP 399
P P PGPS +P
Sbjct: 338 LELGLELEPVPALGPVPGPSVTP 360
Score = 28.9 bits (63), Expect = 8.6
Identities = 15/39 (38%), Positives = 16/39 (41%)
Query: 362 SPGPCPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSPQ 400
+PG P P P P P PG P P P P PQ
Sbjct: 359 TPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQ 397
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,658,717
Number of Sequences: 37866
Number of extensions: 1549901
Number of successful extensions: 38881
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 456
Number of HSP's that attempted gapping in prelim test: 17975
Number of HSP's gapped (non-prelim): 12000
length of query: 400
length of database: 18,247,518
effective HSP length: 104
effective length of query: 296
effective length of database: 14,309,454
effective search space: 4235598384
effective search space used: 4235598384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.