Search of human proteins with 239744152

Search of human proteins with 239744152

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]          354   2e-98
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ...   354   2e-98
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]          224   3e-59
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]           171   2e-43
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]           171   2e-43
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]           171   2e-43
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom...   167   3e-42
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]          163   8e-41
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]          163   8e-41
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]          162   2e-40
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]          157   6e-39
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ...   157   6e-39
gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo ...   157   6e-39
gi|169165669 PREDICTED: similar to high-mobility group nucleosom...   156   9e-39
gi|113415254 PREDICTED: similar to high-mobility group nucleosom...   156   9e-39
gi|113414676 PREDICTED: similar to high-mobility group nucleosom...   156   9e-39
gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]           149   9e-37
gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]            149   9e-37
gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]            149   9e-37
gi|10835240 high mobility group nucleosomal binding domain 4 [Ho...   149   1e-36
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]           148   3e-36
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]            148   3e-36
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]            148   3e-36
gi|169209024 PREDICTED: similar to high-mobility group nucleosom...   145   2e-35
gi|113425750 PREDICTED: similar to high-mobility group nucleosom...   145   2e-35
gi|113425298 PREDICTED: similar to high-mobility group nucleosom...   145   2e-35
gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]           128   3e-30
gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]            128   3e-30
gi|89038348 PREDICTED: hypothetical protein [Homo sapiens]            128   3e-30
gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens]          108   3e-24

>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 171

 Score =  354 bits (909), Expect = 2e-98
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED 60
           MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED
Sbjct: 1   MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED 60

Query: 61  AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP 120
           AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP
Sbjct: 61  AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP 120

Query: 121 KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK
Sbjct: 121 KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171


>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
           sapiens]
          Length = 171

 Score =  354 bits (909), Expect = 2e-98
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED 60
           MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED
Sbjct: 1   MSSCWHCLQEEQGERAMNHGQWQKSRKALASPVTFTDDRSRSGCEAAVEQNDEKTGPEED 60

Query: 61  AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP 120
           AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP
Sbjct: 61  AIACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKP 120

Query: 121 KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK
Sbjct: 121 KNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171


>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 130

 Score =  224 bits (571), Expect = 3e-59
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 63  ACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKN 122
           ACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKN
Sbjct: 22  ACCILPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKN 81

Query: 123 APAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           APAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK
Sbjct: 82  APAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 130


>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  171 bits (434), Expect = 2e-43
 Identities = 86/104 (82%), Positives = 92/104 (88%), Gaps = 3/104 (2%)

Query: 69  QRLRPTAVAA-TVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK 127
           QRL PT +   TVPKRKAEGDAKGDKAKVKD+PQRRSMR SAKPAPPKPEPKPK APAKK
Sbjct: 39  QRLCPTTIVNNTVPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK 98

Query: 128 GEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           GEK+PKGKKG  +ADAG+EGNNPAENGDAK D+AQKAEG G AK
Sbjct: 99  GEKIPKGKKG--KADAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  171 bits (434), Expect = 2e-43
 Identities = 86/104 (82%), Positives = 92/104 (88%), Gaps = 3/104 (2%)

Query: 69  QRLRPTAVAA-TVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK 127
           QRL PT +   TVPKRKAEGDAKGDKAKVKD+PQRRSMR SAKPAPPKPEPKPK APAKK
Sbjct: 39  QRLCPTTIVNNTVPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK 98

Query: 128 GEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           GEK+PKGKKG  +ADAG+EGNNPAENGDAK D+AQKAEG G AK
Sbjct: 99  GEKIPKGKKG--KADAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  171 bits (434), Expect = 2e-43
 Identities = 86/104 (82%), Positives = 92/104 (88%), Gaps = 3/104 (2%)

Query: 69  QRLRPTAVAA-TVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK 127
           QRL PT +   TVPKRKAEGDAKGDKAKVKD+PQRRSMR SAKPAPPKPEPKPK APAKK
Sbjct: 39  QRLCPTTIVNNTVPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK 98

Query: 128 GEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           GEK+PKGKKG  +ADAG+EGNNPAENGDAK D+AQKAEG G AK
Sbjct: 99  GEKIPKGKKG--KADAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
           sapiens]
          Length = 90

 Score =  167 bits (424), Expect = 3e-42
 Identities = 82/92 (89%), Positives = 86/92 (93%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAKGDKAKVKD+PQRRS RLSAKPAPPKPEPKPK APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +ADAGKEGNNPAENGDAK D+AQKAEG GDAK
Sbjct: 59  KADAGKEGNNPAENGDAKTDQAQKAEGAGDAK 90


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score =  163 bits (412), Expect = 8e-41
 Identities = 82/105 (78%), Positives = 89/105 (84%), Gaps = 2/105 (1%)

Query: 67  LPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK 126
           L +RL P AVA T+PK KAEGD KGDKAKVKD+PQRRS RLSAKP+ PKPEPKPK APAK
Sbjct: 6   LARRLHPVAVATTMPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAK 65

Query: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           KGEKV K KKG  +ADAGKEGNNPAENGDAK D+ QKAEG GDA+
Sbjct: 66  KGEKVLKEKKG--KADAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score =  163 bits (412), Expect = 8e-41
 Identities = 82/105 (78%), Positives = 89/105 (84%), Gaps = 2/105 (1%)

Query: 67  LPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK 126
           L +RL P AVA T+PK KAEGD KGDKAKVKD+PQRRS RLSAKP+ PKPEPKPK APAK
Sbjct: 6   LARRLHPVAVATTMPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAK 65

Query: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           KGEKV K KKG  +ADAGKEGNNPAENGDAK D+ QKAEG GDA+
Sbjct: 66  KGEKVLKEKKG--KADAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score =  162 bits (409), Expect = 2e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%), Gaps = 2/103 (1%)

Query: 69  QRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKG 128
           +RL P AVA T+PK KAEGD KGDKAKVKD+PQRRS RLSAKP+ PKPEPKPK APAKKG
Sbjct: 25  KRLHPVAVATTMPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKG 84

Query: 129 EKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           EKV K KKG  +ADAGKEGNNPAENGDAK D+ QKAEG GDA+
Sbjct: 85  EKVLKEKKG--KADAGKEGNNPAENGDAKTDQEQKAEGAGDAR 125


>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 197

 Score =  157 bits (396), Expect = 6e-39
 Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 6/123 (4%)

Query: 50  QNDEKTGPEEDAIACCILPQRLRPTAV-AATVPKRKAEGDAKGDKAKVKDKPQRRSMRLS 108
           +ND  T  ++   A     Q L PTAV AAT+PKRK EGD KGDKAKV D PQRRS RLS
Sbjct: 80  ENDPPT--DQSLCAAASRAQHLSPTAVTAATLPKRKTEGDVKGDKAKV-DTPQRRSTRLS 136

Query: 109 AKPAPPKPEPKPKNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTG 168
           AKPAPPKPEPKPK APAKKGEKVPKGKKG  +ADAGKEGN PAE GDA  D+A++AEG G
Sbjct: 137 AKPAPPKPEPKPKKAPAKKGEKVPKGKKG--KADAGKEGNYPAEKGDAITDQAREAEGDG 194

Query: 169 DAK 171
           +AK
Sbjct: 195 EAK 197


>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
           sapiens]
          Length = 197

 Score =  157 bits (396), Expect = 6e-39
 Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 6/123 (4%)

Query: 50  QNDEKTGPEEDAIACCILPQRLRPTAV-AATVPKRKAEGDAKGDKAKVKDKPQRRSMRLS 108
           +ND  T  ++   A     Q L PTAV AAT+PKRK EGD KGDKAKV D PQRRS RLS
Sbjct: 80  ENDPPT--DQSLCAAASRAQHLSPTAVTAATLPKRKTEGDVKGDKAKV-DTPQRRSTRLS 136

Query: 109 AKPAPPKPEPKPKNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTG 168
           AKPAPPKPEPKPK APAKKGEKVPKGKKG  +ADAGKEGN PAE GDA  D+A++AEG G
Sbjct: 137 AKPAPPKPEPKPKKAPAKKGEKVPKGKKG--KADAGKEGNYPAEKGDAITDQAREAEGDG 194

Query: 169 DAK 171
           +AK
Sbjct: 195 EAK 197


>gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo
           sapiens]
          Length = 197

 Score =  157 bits (396), Expect = 6e-39
 Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 6/123 (4%)

Query: 50  QNDEKTGPEEDAIACCILPQRLRPTAV-AATVPKRKAEGDAKGDKAKVKDKPQRRSMRLS 108
           +ND  T  ++   A     Q L PTAV AAT+PKRK EGD KGDKAKV D PQRRS RLS
Sbjct: 80  ENDPPT--DQSLCAAASRAQHLSPTAVTAATLPKRKTEGDVKGDKAKV-DTPQRRSTRLS 136

Query: 109 AKPAPPKPEPKPKNAPAKKGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTG 168
           AKPAPPKPEPKPK APAKKGEKVPKGKKG  +ADAGKEGN PAE GDA  D+A++AEG G
Sbjct: 137 AKPAPPKPEPKPKKAPAKKGEKVPKGKKG--KADAGKEGNYPAEKGDAITDQAREAEGDG 194

Query: 169 DAK 171
           +AK
Sbjct: 195 EAK 197


>gi|169165669 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  156 bits (394), Expect = 9e-39
 Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGD K DKAKVKD+PQRRS+RLSAKPAPPKPEPKPK APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +ADAG+EGNNPAENG AK D+AQKAE  GDAK
Sbjct: 59  KADAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|113415254 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  156 bits (394), Expect = 9e-39
 Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGD K DKAKVKD+PQRRS+RLSAKPAPPKPEPKPK APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +ADAG+EGNNPAENG AK D+AQKAE  GDAK
Sbjct: 59  KADAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|113414676 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  156 bits (394), Expect = 9e-39
 Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGD K DKAKVKD+PQRRS+RLSAKPAPPKPEPKPK APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +ADAG+EGNNPAENG AK D+AQKAE  GDAK
Sbjct: 59  KADAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  149 bits (377), Expect = 9e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  149 bits (377), Expect = 9e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  149 bits (377), Expect = 9e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|10835240 high mobility group nucleosomal binding domain 4 [Homo
           sapiens]
          Length = 90

 Score =  149 bits (375), Expect = 1e-36
 Identities = 72/92 (78%), Positives = 83/92 (90%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKA+GDAKGDKAKVKD+PQRRS RLSAKPAPPKPEP+PK A AKKGEK+PKG+KG  
Sbjct: 1   MPKRKAKGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKASAKKGEKLPKGRKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +ADAGK+GNNPA+N DA   ++QKAEGTGDAK
Sbjct: 59  KADAGKDGNNPAKNRDASTLQSQKAEGTGDAK 90


>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  148 bits (373), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 67  LPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK 126
           +P    P       P+RKA+GDAKG KAKVKDKPQRRS+RL+AKPAPPKP  KPK  PAK
Sbjct: 1   MPSTYHPPQSPTPCPRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAK 60

Query: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
            GEKV KGKKG  +ADAGKEGNNPAENG+ K D AQKAEG GDAK
Sbjct: 61  NGEKVLKGKKG--KADAGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  148 bits (373), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 67  LPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK 126
           +P    P       P+RKA+GDAKG KAKVKDKPQRRS+RL+AKPAPPKP  KPK  PAK
Sbjct: 1   MPSTYHPPQSPTPCPRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAK 60

Query: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
            GEKV KGKKG  +ADAGKEGNNPAENG+ K D AQKAEG GDAK
Sbjct: 61  NGEKVLKGKKG--KADAGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  148 bits (373), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 67  LPQRLRPTAVAATVPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK 126
           +P    P       P+RKA+GDAKG KAKVKDKPQRRS+RL+AKPAPPKP  KPK  PAK
Sbjct: 1   MPSTYHPPQSPTPCPRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAK 60

Query: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
            GEKV KGKKG  +ADAGKEGNNPAENG+ K D AQKAEG GDAK
Sbjct: 61  NGEKVLKGKKG--KADAGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|169209024 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  145 bits (366), Expect = 2e-35
 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAKGDKAKV+DKPQRRS RLS KPAPPKPE KPK  PAK GEKV KG+ G  
Sbjct: 1   MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +AD GKEGN PAENGDAK D+ QK EG GDAK
Sbjct: 59  KADTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|113425750 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  145 bits (366), Expect = 2e-35
 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAKGDKAKV+DKPQRRS RLS KPAPPKPE KPK  PAK GEKV KG+ G  
Sbjct: 1   MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +AD GKEGN PAENGDAK D+ QK EG GDAK
Sbjct: 59  KADTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|113425298 PREDICTED: similar to high-mobility group nucleosomal
           binding domain 2 [Homo sapiens]
          Length = 90

 Score =  145 bits (366), Expect = 2e-35
 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAKGDKAKV+DKPQRRS RLS KPAPPKPE KPK  PAK GEKV KG+ G  
Sbjct: 1   MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +AD GKEGN PAENGDAK D+ QK EG GDAK
Sbjct: 59  KADTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  128 bits (321), Expect = 3e-30
 Identities = 65/92 (70%), Positives = 75/92 (81%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAK DKAK+KDK Q RS +LS KPA PKP+ KPK AP KKGEKV KG+KG  
Sbjct: 1   MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           RA++ KE N PAENGDA+ ++AQKAEG GDAK
Sbjct: 59  RANSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  128 bits (321), Expect = 3e-30
 Identities = 65/92 (70%), Positives = 75/92 (81%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAK DKAK+KDK Q RS +LS KPA PKP+ KPK AP KKGEKV KG+KG  
Sbjct: 1   MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           RA++ KE N PAENGDA+ ++AQKAEG GDAK
Sbjct: 59  RANSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|89038348 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  128 bits (321), Expect = 3e-30
 Identities = 65/92 (70%), Positives = 75/92 (81%), Gaps = 2/92 (2%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PKRKAEGDAK DKAK+KDK Q RS +LS KPA PKP+ KPK AP KKGEKV KG+KG  
Sbjct: 1   MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKG-- 58

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           RA++ KE N PAENGDA+ ++AQKAEG GDAK
Sbjct: 59  RANSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens]
          Length = 88

 Score =  108 bits (269), Expect = 3e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 4/92 (4%)

Query: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
           +PK K EGDAKGDKAKVKD+P RRS RLS KP+  K   + K    ++G +  + KKG  
Sbjct: 1   MPKTKIEGDAKGDKAKVKDEPLRRSARLSTKPS--KARAQAKKGSREEGREGTQWKKG-- 56

Query: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
           +A AGKEGNNPAENGDAK D+AQKAEG GDAK
Sbjct: 57  KAVAGKEGNNPAENGDAKTDQAQKAEGAGDAK 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.307    0.125    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,219,024
Number of Sequences: 37866
Number of extensions: 450138
Number of successful extensions: 5667
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 4060
Number of HSP's gapped (non-prelim): 1841
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.