Search of human proteins with 116256473

Search of human proteins with 116256473

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo
sapiens]
         (629 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo ...  1269   0.0  
gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo ...  1208   0.0  
gi|153070264 meprin A beta [Homo sapiens]                              32   1.4  
gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap...    32   1.8  
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap...    32   1.8  
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap...    32   1.8  
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap...    32   1.8  
gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens]     32   2.3  
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   31   3.0  
gi|4557287 angiotensinogen preproprotein [Homo sapiens]                31   3.9  
gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [...    31   3.9  
gi|145309309 ubiquitin specific protease 9, X-linked isoform 3 [...    31   3.9  
gi|144446030 lymphocyte antigen 75 [Homo sapiens]                      31   3.9  
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]       30   6.7  
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]       30   6.7  
gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]          30   6.7  
gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]          30   6.7  
gi|45580742 dehydrodolichyl diphosphate synthase isoform a [Homo...    30   6.7  

>gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 629/629 (100%), Positives = 629/629 (100%)

Query: 1   MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFA 60
           MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFA
Sbjct: 1   MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFA 60

Query: 61  LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV 120
           LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV
Sbjct: 61  LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV 120

Query: 121 YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI 180
           YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI
Sbjct: 121 YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI 180

Query: 181 RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN 240
           RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN
Sbjct: 181 RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN 240

Query: 241 TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD 300
           TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD
Sbjct: 241 TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD 300

Query: 301 ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL 360
           ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL
Sbjct: 301 ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL 360

Query: 361 LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI 420
           LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI
Sbjct: 361 LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI 420

Query: 421 INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS 480
           INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS
Sbjct: 421 INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS 480

Query: 481 PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL 540
           PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL
Sbjct: 481 PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL 540

Query: 541 LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE 600
           LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE
Sbjct: 541 LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE 600

Query: 601 NPHLQKHILELASILDVRNVFFENTIDDY 629
           NPHLQKHILELASILDVRNVFFENTIDDY
Sbjct: 601 NPHLQKHILELASILDVRNVFFENTIDDY 629


>gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo
           sapiens]
          Length = 606

 Score = 1208 bits (3125), Expect = 0.0
 Identities = 605/629 (96%), Positives = 606/629 (96%), Gaps = 23/629 (3%)

Query: 1   MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFA 60
           MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRS                       +TEFA
Sbjct: 1   MVRGARQPQQPRSRLAPRLTGTVEKPPRKRRS-----------------------RTEFA 37

Query: 61  LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV 120
           LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV
Sbjct: 38  LKEIMSSGGAEDDIPQGERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDV 97

Query: 121 YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI 180
           YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI
Sbjct: 98  YTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAI 157

Query: 181 RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN 240
           RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN
Sbjct: 158 RQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFN 217

Query: 241 TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD 300
           TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD
Sbjct: 218 TEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLAETGAPLLEQGMIVGQLSLAD 277

Query: 301 ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL 360
           ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL
Sbjct: 278 ALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL 337

Query: 361 LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI 420
           LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI
Sbjct: 338 LYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPTGRSDSEGPYDFGGVLTNSNRDI 397

Query: 421 INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS 480
           INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS
Sbjct: 398 INGDAIHKRNQSHKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLS 457

Query: 481 PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL 540
           PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL
Sbjct: 458 PTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQEYLRKINRDIAQL 517

Query: 541 LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE 600
           LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE
Sbjct: 518 LTHSRSIDQAFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRETRNYPESYPQLPRDETVE 577

Query: 601 NPHLQKHILELASILDVRNVFFENTIDDY 629
           NPHLQKHILELASILDVRNVFFENTIDDY
Sbjct: 578 NPHLQKHILELASILDVRNVFFENTIDDY 606


>gi|153070264 meprin A beta [Homo sapiens]
          Length = 701

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%)

Query: 465 KNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLN-----NPLMAFLFVSGLSSMR 519
           +NFT   G P   L SP  Y       S +G  F ++LN     N  + F  +SG +  +
Sbjct: 435 RNFTQFIGSPNGTLYSPPFY-------SSKGYAFQIYLNLAHVTNAGIYFHLISGANDDQ 487

Query: 520 RGL---WEKCQEYLRKINRDIAQLLTHSRSI 547
                 W++    L   N DI Q +++ RSI
Sbjct: 488 LQWPCPWQQATMTLLDQNPDIRQRMSNQRSI 518


>gi|151101151 coiled-coil domain containing 2 isoform b [Homo
           sapiens]
          Length = 372

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 132 RQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNK 191
           RQ+LD  Y L     G + SKI +L       T+E + L +    Y+  ++ S Y  ++ 
Sbjct: 89  RQILDKSYYL-----GLLRSKISEL-------TTEVNKLQKGIEMYN--QENSVY--LSY 132

Query: 192 EDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVL 251
           E R E +  +                       +KEL  ++ DY       D++  N  +
Sbjct: 133 EKRAETLAVE-----------------------IKELQGQLADYNMLV---DKLNTNTEM 166

Query: 252 QEVAAFIEADPVMVLNDDNT----IVITSNRLAETGAPLLEQGMIVGQLSLADALIIGNC 307
           +EV    + + +   ND  T    ++ T  +  E     +E+ +   + +  D +   + 
Sbjct: 167 EEVMN--DYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF 224

Query: 308 NNQVKFSELTVDMFRMLQALEREPMNLASQ-MNKPGMQ-ESADKPTRRE 354
            NQVK+ E+     ++LQ L+     L SQ M K  ++ E A    ++E
Sbjct: 225 ENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQE 273


>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 132 RQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNK 191
           RQ+LD  Y L     G + SKI +L       T+E + L +    Y+  ++ S Y  ++ 
Sbjct: 89  RQILDKSYYL-----GLLRSKISEL-------TTEVNKLQKGIEMYN--QENSVY--LSY 132

Query: 192 EDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVL 251
           E R E +  +                       +KEL  ++ DY       D++  N  +
Sbjct: 133 EKRAETLAVE-----------------------IKELQGQLADYNMLV---DKLNTNTEM 166

Query: 252 QEVAAFIEADPVMVLNDDNT----IVITSNRLAETGAPLLEQGMIVGQLSLADALIIGNC 307
           +EV    + + +   ND  T    ++ T  +  E     +E+ +   + +  D +   + 
Sbjct: 167 EEVMN--DYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF 224

Query: 308 NNQVKFSELTVDMFRMLQALEREPMNLASQ-MNKPGMQ-ESADKPTRRE 354
            NQVK+ E+     ++LQ L+     L SQ M K  ++ E A    ++E
Sbjct: 225 ENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQE 273


>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 132 RQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNK 191
           RQ+LD  Y L     G + SKI +L       T+E + L +    Y+  ++ S Y  ++ 
Sbjct: 89  RQILDKSYYL-----GLLRSKISEL-------TTEVNKLQKGIEMYN--QENSVY--LSY 132

Query: 192 EDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVL 251
           E R E +  +                       +KEL  ++ DY       D++  N  +
Sbjct: 133 EKRAETLAVE-----------------------IKELQGQLADYNMLV---DKLNTNTEM 166

Query: 252 QEVAAFIEADPVMVLNDDNT----IVITSNRLAETGAPLLEQGMIVGQLSLADALIIGNC 307
           +EV    + + +   ND  T    ++ T  +  E     +E+ +   + +  D +   + 
Sbjct: 167 EEVMN--DYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF 224

Query: 308 NNQVKFSELTVDMFRMLQALEREPMNLASQ-MNKPGMQ-ESADKPTRRE 354
            NQVK+ E+     ++LQ L+     L SQ M K  ++ E A    ++E
Sbjct: 225 ENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQE 273


>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 132 RQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNK 191
           RQ+LD  Y L     G + SKI +L       T+E + L +    Y+  ++ S Y  ++ 
Sbjct: 89  RQILDKSYYL-----GLLRSKISEL-------TTEVNKLQKGIEMYN--QENSVY--LSY 132

Query: 192 EDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVL 251
           E R E +  +                       +KEL  ++ DY       D++  N  +
Sbjct: 133 EKRAETLAVE-----------------------IKELQGQLADYNMLV---DKLNTNTEM 166

Query: 252 QEVAAFIEADPVMVLNDDNT----IVITSNRLAETGAPLLEQGMIVGQLSLADALIIGNC 307
           +EV    + + +   ND  T    ++ T  +  E     +E+ +   + +  D +   + 
Sbjct: 167 EEVMN--DYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF 224

Query: 308 NNQVKFSELTVDMFRMLQALEREPMNLASQ-MNKPGMQ-ESADKPTRRE 354
            NQVK+ E+     ++LQ L+     L SQ M K  ++ E A    ++E
Sbjct: 225 ENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQE 273


>gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens]
          Length = 2555

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 187 SQVNKEDRP--ELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQ 244
           S+++ +D     L + +L+   R + +     KM+ + ++ K +S  +  YTHR +  ++
Sbjct: 320 SRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISS-VSYYTHRHSNPEE 378

Query: 245 VEWNLVLQEVAAFIEADPVM--VLND 268
            EW L  + +A +I+ + ++  VL D
Sbjct: 379 EEW-LTAERMAEWIQQNNILSIVLQD 403


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 323 MLQALEREPMNLASQMNKPGMQESADKPTRRENPHKYL--LYKPTFSQLYTFLAASFKEL 380
           M+  ++  P N+  Q      Q  +D   ++  P   L  L+K     +Y+F   SFKE 
Sbjct: 763 MVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEA 822

Query: 381 PANSVLLIYLSATGV 395
            ++++  I  S TG+
Sbjct: 823 HSDTLFTIGNSITGI 837


>gi|4557287 angiotensinogen preproprotein [Homo sapiens]
          Length = 485

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 308 NNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQE 345
           N++++  E+   +F  L+A EREP     Q+NKP + E
Sbjct: 416 NDRIRVGEVLNSIFFELEADEREPTESTQQLNKPEVLE 453


>gi|145309311 ubiquitin specific protease 9, X-linked isoform 4
           [Homo sapiens]
          Length = 2554

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 191 KEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLV 250
           +E    L + +L+   R + +     KM+ + ++ K +S  +  YTHR    ++ EW L 
Sbjct: 325 EETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISS-VSYYTHRHGNPEEEEW-LT 382

Query: 251 LQEVAAFIEADPVM--VLND 268
            + +A +I+ + ++  VL D
Sbjct: 383 AERMAEWIQQNNILSIVLRD 402


>gi|145309309 ubiquitin specific protease 9, X-linked isoform 3
           [Homo sapiens]
          Length = 2570

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 191 KEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLV 250
           +E    L + +L+   R + +     KM+ + ++ K +S  +  YTHR    ++ EW L 
Sbjct: 325 EETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISS-VSYYTHRHGNPEEEEW-LT 382

Query: 251 LQEVAAFIEADPVM--VLND 268
            + +A +I+ + ++  VL D
Sbjct: 383 AERMAEWIQQNNILSIVLRD 402


>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
          Length = 1722

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 13/70 (18%)

Query: 71  EDDIPQG-----------ERKTVTDFCYLLDKS--KQLFNGLRDLPQYGQKQWQSYFGRT 117
           ED++P G           E++ + D     DKS  K  + GLRD+   G+  W +  GR 
Sbjct: 519 EDEVPFGTNCNLTITSRFEQEYLNDLMKKYDKSLRKYFWTGLRDVDSCGEYNWATVGGRR 578

Query: 118 FDVYTKLWKF 127
             V    W F
Sbjct: 579 RAVTFSNWNF 588


>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
          Length = 345

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 3  RGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFALK 62
          +G R P QP    AP+       PP   +    G G S H +S G     F    + A  
Sbjct: 19 QGQRPPPQPPQAQAPQ-------PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKD 71

Query: 63 EIMSSGGAEDDIPQGERKTVTDFCYLLD 90
           ++    A D +   +++ + D   +L+
Sbjct: 72 GVLDLKAAADTLAVRQKRRIYDITNVLE 99


>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
          Length = 346

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 3  RGARQPQQPRSRLAPRLTGTVEKPPRKRRSSIRGSGDSSHSQSQGERYQHFTEKTEFALK 62
          +G R P QP    AP+       PP   +    G G S H +S G     F    + A  
Sbjct: 19 QGQRPPPQPPQAQAPQ-------PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKD 71

Query: 63 EIMSSGGAEDDIPQGERKTVTDFCYLLD 90
           ++    A D +   +++ + D   +L+
Sbjct: 72 GVLDLKAAADTLAVRQKRRIYDITNVLE 99


>gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]
          Length = 357

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 153 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 208
           +G L + +   T       + ++  +    R Y  Q      KE    L  +       F
Sbjct: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120

Query: 209 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 267
             +  L+ ++DV+K L++++ D + D  H +NT  D VE     +EV+  +  + V+   
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177

Query: 268 DDNTIVITSNRLAETGAPLLEQG 290
            ++ + +    L   GA ++E G
Sbjct: 178 REDQVEMADYALKSAGASIIEAG 200


>gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
          Length = 357

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 153 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 208
           +G L + +   T       + ++  +    R Y  Q      KE    L  +       F
Sbjct: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120

Query: 209 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 267
             +  L+ ++DV+K L++++ D + D  H +NT  D VE     +EV+  +  + V+   
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177

Query: 268 DDNTIVITSNRLAETGAPLLEQG 290
            ++ + +    L   GA ++E G
Sbjct: 178 REDQVEMADYALKSAGASIIEAG 200


>gi|45580742 dehydrodolichyl diphosphate synthase isoform a [Homo
           sapiens]
          Length = 334

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 297 SLADALIIGNCNNQVKFSELTVDMF---RMLQALEREPMNLASQMNKPGMQESADKPTRR 353
           +L +A++    N+ V   +   DM+   R  Q LER+   +  Q+ + G+Q S D   RR
Sbjct: 239 NLFEAILQFQMNHSV-LQQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRR 297

Query: 354 ENPHK 358
              HK
Sbjct: 298 TRLHK 302


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,120,536
Number of Sequences: 37866
Number of extensions: 1018252
Number of successful extensions: 2719
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2711
Number of HSP's gapped (non-prelim): 22
length of query: 629
length of database: 18,247,518
effective HSP length: 108
effective length of query: 521
effective length of database: 14,157,990
effective search space: 7376312790
effective search space used: 7376312790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.